RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 PKHD1P08F94 4074 aa3.54□□□□□ -1.84
HMGB1P44-201ENST00000508597 DNAH11Q96DT5 4516 aa3.54□□□□□ -1.84
HMGB1P44-201ENST00000508597 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P44-201ENST00000508597 TRBV30A0A0K0K1B3 111 aa3.54□□□□□ -1.84
HMGB1P44-201ENST00000508597 KRTDAPP60985 99 aa3.54□□□□□ -1.84
HMGB1P44-201ENST00000508597 CKS1BP61024 79 aa3.54□□□□□ -1.84
HMGB1P44-201ENST00000508597 HIGD2BQ4VC39 106 aa3.54□□□□□ -1.84
HMGB1P44-201ENST00000508597 COX7B2Q8TF08 81 aa3.54□□□□□ -1.84
HMGB1P44-201ENST00000508597 CARD19Q96LW7 228 aa3.54□□□□□ -1.84
HMGB1P44-201ENST00000508597 CAMK2N2Q96S95 79 aa3.54□□□□□ -1.84
HMGB1P44-201ENST00000508597 DNAH5Q8TE73 4624 aa3.54□□□□□ -1.84
HMGB1P44-201ENST00000508597 C16orf90A8MZG2 172 aa3.53□□□□□ -1.84
HMGB1P44-201ENST00000508597 LINC00587B1AMM8 73 aa3.53□□□□□ -1.84
HMGB1P44-201ENST00000508597 SPINK8P0C7L1 97 aa3.53□□□□□ -1.84
HMGB1P44-201ENST00000508597 TLX1NBP0CAT3 122 aa3.53□□□□□ -1.84
HMGB1P44-201ENST00000508597 ADAMTSL4-AS1Q5T5F5 129 aa3.53□□□□□ -1.84
HMGB1P44-201ENST00000508597 PLEKHB2Q96CS7 222 aa3.53□□□□□ -1.84
HMGB1P44-201ENST00000508597 TOMM7Q9P0U1 55 aa3.53□□□□□ -1.84
HMGB1P44-201ENST00000508597 LINC00474Q9P2X8 69 aa3.53□□□□□ -1.84
HMGB1P44-201ENST00000508597 A0A087X002 238 aa3.52□□□□□ -1.85
HMGB1P44-201ENST00000508597 LOC107984640A0A0U1RRK4 108 aa3.52□□□□□ -1.85
HMGB1P44-201ENST00000508597 E9PLD3 99 aa3.52□□□□□ -1.85
HMGB1P44-201ENST00000508597 LEPROTO15243 131 aa3.52□□□□□ -1.85
HMGB1P44-201ENST00000508597 NMUP48645 174 aa3.52□□□□□ -1.85
HMGB1P44-201ENST00000508597 HERV-K104P63124 156 aa3.52□□□□□ -1.85
HMGB1P44-201ENST00000508597 COX17Q14061 63 aa3.52□□□□□ -1.85
HMGB1P44-201ENST00000508597 SDIM1Q6ZPB5 146 aa3.52□□□□□ -1.85
HMGB1P44-201ENST00000508597 Q6ZRU5 148 aa3.52□□□□□ -1.85
HMGB1P44-201ENST00000508597 MYMXA0A1B0GTQ4 84 aa3.51□□□□□ -1.85
HMGB1P44-201ENST00000508597 HSBP1L1C9JCN9 74 aa3.51□□□□□ -1.85
HMGB1P44-201ENST00000508597 TSTD3H0UI37 97 aa3.51□□□□□ -1.85
HMGB1P44-201ENST00000508597 UNQ6190/PRO20217Q6UXQ8 127 aa3.51□□□□□ -1.85
HMGB1P44-201ENST00000508597 PMCHL2Q9BQD1 86 aa3.51□□□□□ -1.85
HMGB1P44-201ENST00000508597 C6orf48Q9UBA6 75 aa3.51□□□□□ -1.85
HMGB1P44-201ENST00000508597 DYNC1H1Q14204 4646 aaKnown RBP3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 LRP1BQ9NZR2 4599 aa3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 NDUFC2-KCTD14E9PQ53 114 aa3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 J3QQQ9 107 aa3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 LGALS3P17931 250 aaKnown RBP3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 XGP55808 180 aa3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 CIRBPQ14011 172 aaKnown RBP3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 JOSD1Q15040 202 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 C2orf82Q6UX34 121 aa3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 Q6ZSA8 131 aa3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 LINC00526Q96FQ7 95 aa3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 ZNF625Q96I27 306 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 FAM218AQ96MZ4 157 aa3.5□□□□□ -1.85
HMGB1P44-201ENST00000508597 EPPK1P58107 5090 aaKnown RBP3.49□□□□□ -1.85
HMGB1P44-201ENST00000508597 KRTAP10-1P60331 282 aa3.49□□□□□ -1.85
HMGB1P44-201ENST00000508597 NDUFA12Q9UI09 145 aa3.49□□□□□ -1.85
HMGB1P44-201ENST00000508597 ERG28Q9UKR5 140 aa3.49□□□□□ -1.85
HMGB1P44-201ENST00000508597 BIRC6Q9NR09 4857 aa3.49□□□□□ -1.85
HMGB1P44-201ENST00000508597 DNAH8Q96JB1 4490 aa3.49□□□□□ -1.85
HMGB1P44-201ENST00000508597 RPL18AQ02543 176 aaKnown RBP3.48□□□□□ -1.85
HMGB1P44-201ENST00000508597 Q6ZRP5 223 aa3.48□□□□□ -1.85
HMGB1P44-201ENST00000508597 SPACA4Q8TDM5 124 aa3.48□□□□□ -1.85
HMGB1P44-201ENST00000508597 A0A096LNI7 61 aa3.47□□□□□ -1.85
HMGB1P44-201ENST00000508597 EPM2AB3EWF7 344 aa3.47□□□□□ -1.85
HMGB1P44-201ENST00000508597 TIMM17BO60830 172 aa3.47□□□□□ -1.85
HMGB1P44-201ENST00000508597 FUSP35637 526 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P44-201ENST00000508597 MEIG1Q5JSS6 88 aa3.47□□□□□ -1.85
HMGB1P44-201ENST00000508597 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
HMGB1P44-201ENST00000508597 Q6ZVH6 145 aa3.47□□□□□ -1.85
HMGB1P44-201ENST00000508597 COPS9Q8WXC6 57 aa3.47□□□□□ -1.85
HMGB1P44-201ENST00000508597 DPH3Q96FX2 82 aa3.47□□□□□ -1.85
HMGB1P44-201ENST00000508597 PLAC8Q9NZF1 115 aa3.47□□□□□ -1.85
HMGB1P44-201ENST00000508597 RYR1P21817 5038 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 IGKV2-24A0A0C4DH68 120 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 LOC107984156A0A0G2JMH3 177 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 A0A0J9YXY3 114 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 ZNF815PA8K554 130 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 DDTP30046 118 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 PFN2P35080 140 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 LINC00158P58513 81 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 TSPEAR-AS2P59090 65 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 MAJINQ3KP22 176 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 LINC01620Q4KN68 170 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 C9orf116Q5BN46 136 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 PYY3Q5JQD4 70 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 ARL17AQ8IVW1 177 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 ATOH7Q8N100 152 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 VAMP8Q9BV40 100 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 PPDPFQ9H3Y8 114 aa3.46□□□□□ -1.86
HMGB1P44-201ENST00000508597 IGKV2D-26A0A0A0MRZ7 120 aa3.45□□□□□ -1.86
HMGB1P44-201ENST00000508597 TMEM238C9JI98 176 aa3.45□□□□□ -1.86
HMGB1P44-201ENST00000508597 DLEU1O43261 78 aa3.45□□□□□ -1.86
HMGB1P44-201ENST00000508597 SMIM13P0DJ93 91 aa3.45□□□□□ -1.86
HMGB1P44-201ENST00000508597 Q6ZVQ6 151 aa3.45□□□□□ -1.86
HMGB1P44-201ENST00000508597 CIRBP-AS1Q8TBR5 109 aa3.45□□□□□ -1.86
HMGB1P44-201ENST00000508597 TP73-AS1Q9UF72 201 aa3.45□□□□□ -1.86
HMGB1P44-201ENST00000508597 CHTF8P0CG12 524 aa3.44□□□□□ -1.86
HMGB1P44-201ENST00000508597 COX8AP10176 69 aa3.44□□□□□ -1.86
HMGB1P44-201ENST00000508597 IFITM1P13164 125 aa3.44□□□□□ -1.86
HMGB1P44-201ENST00000508597 SPATA45Q537H7 98 aa3.44□□□□□ -1.86
HMGB1P44-201ENST00000508597 C9orf129Q5T035 196 aaKnown RBP3.44□□□□□ -1.86
HMGB1P44-201ENST00000508597 SCGB1D4Q6XE38 83 aa3.44□□□□□ -1.86
HMGB1P44-201ENST00000508597 SCXQ7RTU7 201 aa3.44□□□□□ -1.86
HMGB1P44-201ENST00000508597 BOD1L2Q8IYS8 172 aa3.44□□□□□ -1.86
HMGB1P44-201ENST00000508597 MIR7-3HGQ8N6C7 128 aa3.44□□□□□ -1.86
HMGB1P44-201ENST00000508597 C7orf33Q8WU49 177 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms