RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ERG28Q9UKR5 140 aa5.77□□□□□ -1.49
NUP54-207ENST00000508583 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
NUP54-207ENST00000508583 C3orf79P0CE67 100 aa5.76□□□□□ -1.49
NUP54-207ENST00000508583 PMCHL2Q9BQD1 86 aa5.76□□□□□ -1.49
NUP54-207ENST00000508583 NDUFA12Q9UI09 145 aa5.76□□□□□ -1.49
NUP54-207ENST00000508583 ABCA13Q86UQ4 5058 aa5.76□□□□□ -1.49
NUP54-207ENST00000508583 E9PLD3 99 aa5.75□□□□□ -1.49
NUP54-207ENST00000508583 J3QQQ9 107 aa5.75□□□□□ -1.49
NUP54-207ENST00000508583 PFN2P35080 140 aa5.75□□□□□ -1.49
NUP54-207ENST00000508583 MEIG1Q5JSS6 88 aa5.75□□□□□ -1.49
NUP54-207ENST00000508583 A0A1W2PNN7 141 aa5.74□□□□□ -1.49
NUP54-207ENST00000508583 M0QXV9 152 aa5.74□□□□□ -1.49
NUP54-207ENST00000508583 LINC00158P58513 81 aa5.74□□□□□ -1.49
NUP54-207ENST00000508583 LBHQ53QV2 105 aaPredicted RBP5.74□□□□□ -1.49
NUP54-207ENST00000508583 C9orf129Q5T035 196 aaKnown RBP5.74□□□□□ -1.49
NUP54-207ENST00000508583 FAM19A5Q7Z5A7 132 aaPredicted RBP5.74□□□□□ -1.49
NUP54-207ENST00000508583 HIST3H2BBQ8N257 126 aa5.74□□□□□ -1.49
NUP54-207ENST00000508583 XAGE1AQ9HD64 81 aa5.74□□□□□ -1.49
NUP54-207ENST00000508583 TP73-AS1Q9UF72 201 aa5.74□□□□□ -1.49
NUP54-207ENST00000508583 INAFM2P0DMQ5 153 aa5.73□□□□□ -1.49
NUP54-207ENST00000508583 SNRPEP62304 92 aaKnown RBP5.73□□□□□ -1.49
NUP54-207ENST00000508583 RPL24P83731 157 aaKnown RBP5.73□□□□□ -1.49
NUP54-207ENST00000508583 NKAPP1Q8N9T2 125 aa5.73□□□□□ -1.49
NUP54-207ENST00000508583 HIST1H2BLQ99880 126 aa5.73□□□□□ -1.49
NUP54-207ENST00000508583 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
NUP54-207ENST00000508583 FAT1Q14517 4588 aa5.73□□□□□ -1.49
NUP54-207ENST00000508583 SRRM2Q9UQ35 2752 aaKnown RBP5.72□□□□□ -1.49
NUP54-207ENST00000508583 UBE2BP63146 152 aa5.72□□□□□ -1.49
NUP54-207ENST00000508583 SND1-IT1Q9HBX3 110 aa5.72□□□□□ -1.49
NUP54-207ENST00000508583 FAM168BA1KXE4 195 aa5.71□□□□□ -1.5
NUP54-207ENST00000508583 HSBP1L1C9JCN9 74 aa5.71□□□□□ -1.5
NUP54-207ENST00000508583 PRR3P79522 188 aaKnown RBP5.71□□□□□ -1.5
NUP54-207ENST00000508583 MRPL55Q7Z7F7 128 aaKnown RBP5.71□□□□□ -1.5
NUP54-207ENST00000508583 IGLV5-37A0A075B6J1 123 aa5.7□□□□□ -1.5
NUP54-207ENST00000508583 C5orf52A6NGY3 159 aa5.7□□□□□ -1.5
NUP54-207ENST00000508583 PHF5AQ7RTV0 110 aaKnown RBP5.7□□□□□ -1.5
NUP54-207ENST00000508583 SVIPQ8NHG7 77 aa5.7□□□□□ -1.5
NUP54-207ENST00000508583 MIEN1Q9BRT3 115 aa5.7□□□□□ -1.5
NUP54-207ENST00000508583 C22orf24Q9Y442 160 aa5.7□□□□□ -1.5
NUP54-207ENST00000508583 SMIM13P0DJ93 91 aa5.69□□□□□ -1.5
NUP54-207ENST00000508583 TSPEAR-AS2P59090 65 aa5.69□□□□□ -1.5
NUP54-207ENST00000508583 SERTAD4-AS1Q5TG53 156 aa5.69□□□□□ -1.5
NUP54-207ENST00000508583 A0A0U1RRA0 63 aa5.68□□□□□ -1.5
NUP54-207ENST00000508583 ZNF815PA8K554 130 aa5.68□□□□□ -1.5
NUP54-207ENST00000508583 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
NUP54-207ENST00000508583 MIR7-3HGQ8N6C7 128 aa5.68□□□□□ -1.5
NUP54-207ENST00000508583 PSORS1C2Q9UIG4 136 aa5.68□□□□□ -1.5
NUP54-207ENST00000508583 VPS13BQ7Z7G8 4022 aa5.67□□□□□ -1.5
NUP54-207ENST00000508583 IGKV2D-26A0A0A0MRZ7 120 aa5.67□□□□□ -1.5
NUP54-207ENST00000508583 TIMM17BO60830 172 aa5.67□□□□□ -1.5
NUP54-207ENST00000508583 S100A12P80511 92 aa5.67□□□□□ -1.5
NUP54-207ENST00000508583 C1orf137Q5JT78 98 aa5.67□□□□□ -1.5
NUP54-207ENST00000508583 SCGB1D4Q6XE38 83 aa5.67□□□□□ -1.5
NUP54-207ENST00000508583 COPS9Q8WXC6 57 aa5.67□□□□□ -1.5
NUP54-207ENST00000508583 A0A0J9YXY3 114 aa5.66□□□□□ -1.5
NUP54-207ENST00000508583 SCGB1D1O95968 90 aa5.66□□□□□ -1.5
NUP54-207ENST00000508583 VPREB1P12018 145 aa5.66□□□□□ -1.5
NUP54-207ENST00000508583 ANKRD39Q53RE8 183 aa5.66□□□□□ -1.5
NUP54-207ENST00000508583 SPINK6Q6UWN8 80 aa5.66□□□□□ -1.5
NUP54-207ENST00000508583 KRTAP7-1Q8IUC3 87 aa5.66□□□□□ -1.5
NUP54-207ENST00000508583 BOD1L2Q8IYS8 172 aa5.66□□□□□ -1.5
NUP54-207ENST00000508583 ATOH7Q8N100 152 aa5.66□□□□□ -1.5
NUP54-207ENST00000508583 LOC107984156A0A0G2JMH3 177 aa5.65□□□□□ -1.5
NUP54-207ENST00000508583 TMEM238C9JI98 176 aa5.65□□□□□ -1.5
NUP54-207ENST00000508583 M0R378 163 aa5.65□□□□□ -1.5
NUP54-207ENST00000508583 REG3GQ6UW15 175 aa5.65□□□□□ -1.5
NUP54-207ENST00000508583 ARL17AQ8IVW1 177 aa5.65□□□□□ -1.5
NUP54-207ENST00000508583 LINC00167Q96N53 147 aa5.65□□□□□ -1.5
NUP54-207ENST00000508583 OXTP01178 125 aa5.64□□□□□ -1.51
NUP54-207ENST00000508583 IGLV7-43P04211 117 aa5.64□□□□□ -1.51
NUP54-207ENST00000508583 Q6ZVH6 145 aa5.64□□□□□ -1.51
NUP54-207ENST00000508583 DIRC1Q969H9 104 aa5.64□□□□□ -1.51
NUP54-207ENST00000508583 CBY1Q9Y3M2 126 aa5.64□□□□□ -1.51
NUP54-207ENST00000508583 FLG2Q5D862 2391 aaPredicted RBP5.63□□□□□ -1.51
NUP54-207ENST00000508583 TRBV10-2A0A0K0K1G8 114 aa5.63□□□□□ -1.51
NUP54-207ENST00000508583 GAGE10A6NGK3 116 aa5.63□□□□□ -1.51
NUP54-207ENST00000508583 BCE1O60756 84 aa5.63□□□□□ -1.51
NUP54-207ENST00000508583 NDUFC2O95298 119 aa5.63□□□□□ -1.51
NUP54-207ENST00000508583 RPL28P46779 137 aaKnown RBP5.63□□□□□ -1.51
NUP54-207ENST00000508583 DAND5Q8N907 189 aa5.63□□□□□ -1.51
NUP54-207ENST00000508583 SPANXB1Q9NS25 103 aaPredicted RBP5.63□□□□□ -1.51
NUP54-207ENST00000508583 IGLV1-50A0A075B6I6 118 aa5.62□□□□□ -1.51
NUP54-207ENST00000508583 IGKV2-28A0A075B6P5 120 aa5.62□□□□□ -1.51
NUP54-207ENST00000508583 RPL37AP8A6NKH3 93 aa5.62□□□□□ -1.51
NUP54-207ENST00000508583 IGKV2D-28P01615 120 aa5.62□□□□□ -1.51
NUP54-207ENST00000508583 HNRNPA3P51991 378 aaKnown RBP5.62□□□□□ -1.51
NUP54-207ENST00000508583 KRTAP29-1A8MX34 341 aaPredicted RBP5.61□□□□□ -1.51
NUP54-207ENST00000508583 ZNF861PO60384 105 aa5.61□□□□□ -1.51
NUP54-207ENST00000508583 SRSF9Q13242 221 aaKnown RBP eCLIP5.61□□□□□ -1.51
NUP54-207ENST00000508583 PPDPFQ9H3Y8 114 aa5.61□□□□□ -1.51
NUP54-207ENST00000508583 SPANXCQ9NY87 97 aa5.61□□□□□ -1.51
NUP54-207ENST00000508583 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
NUP54-207ENST00000508583 PRYO14603 147 aa5.6□□□□□ -1.51
NUP54-207ENST00000508583 NCR3O14931 201 aa5.6□□□□□ -1.51
NUP54-207ENST00000508583 IFITM1P13164 125 aa5.6□□□□□ -1.51
NUP54-207ENST00000508583 UBE2AP49459 152 aa5.6□□□□□ -1.51
NUP54-207ENST00000508583 S100A7L2Q5SY68 101 aa5.6□□□□□ -1.51
NUP54-207ENST00000508583 ADAMTSL4-AS1Q5T5F5 129 aa5.6□□□□□ -1.51
NUP54-207ENST00000508583 LINC00308Q8TCZ7 52 aa5.6□□□□□ -1.51
NUP54-207ENST00000508583 LITAFQ99732 161 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms