RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 TSPEAR-AS2P59090 65 aa3.58□□□□□ -1.84
USP46-206ENST00000506707 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
USP46-206ENST00000506707 KRTDAPP60985 99 aa3.58□□□□□ -1.84
USP46-206ENST00000506707 SNRPEP62304 92 aaKnown RBP3.58□□□□□ -1.84
USP46-206ENST00000506707 C9orf129Q5T035 196 aaKnown RBP3.58□□□□□ -1.84
USP46-206ENST00000506707 TMA7Q9Y2S6 64 aaKnown RBP3.58□□□□□ -1.84
USP46-206ENST00000506707 FAM168BA1KXE4 195 aa3.57□□□□□ -1.84
USP46-206ENST00000506707 LEPROTO15243 131 aa3.57□□□□□ -1.84
USP46-206ENST00000506707 S100A2P29034 98 aa3.57□□□□□ -1.84
USP46-206ENST00000506707 COX17Q14061 63 aa3.57□□□□□ -1.84
USP46-206ENST00000506707 Q5VSD8 79 aa3.57□□□□□ -1.84
USP46-206ENST00000506707 XAGE1AQ9HD64 81 aa3.57□□□□□ -1.84
USP46-206ENST00000506707 PCLOQ9Y6V0 5065 aa3.56□□□□□ -1.84
USP46-206ENST00000506707 E9PLD3 99 aa3.56□□□□□ -1.84
USP46-206ENST00000506707 J3QQQ9 107 aa3.56□□□□□ -1.84
USP46-206ENST00000506707 PFN2P35080 140 aa3.56□□□□□ -1.84
USP46-206ENST00000506707 SFTA2Q6UW10 78 aa3.56□□□□□ -1.84
USP46-206ENST00000506707 PLEKHB2Q96CS7 222 aa3.56□□□□□ -1.84
USP46-206ENST00000506707 NDUFA12Q9UI09 145 aa3.56□□□□□ -1.84
USP46-206ENST00000506707 ERG28Q9UKR5 140 aa3.56□□□□□ -1.84
USP46-206ENST00000506707 ABCA13Q86UQ4 5058 aa3.56□□□□□ -1.84
USP46-206ENST00000506707 SRRM2Q9UQ35 2752 aaKnown RBP3.56□□□□□ -1.84
USP46-206ENST00000506707 VPS13BQ7Z7G8 4022 aa3.55□□□□□ -1.84
USP46-206ENST00000506707 IGKV2D-26A0A0A0MRZ7 120 aa3.55□□□□□ -1.84
USP46-206ENST00000506707 MYMXA0A1B0GTQ4 84 aa3.55□□□□□ -1.84
USP46-206ENST00000506707 HERVK_113P61574 105 aa3.55□□□□□ -1.84
USP46-206ENST00000506707 HERV-K104P63124 156 aa3.55□□□□□ -1.84
USP46-206ENST00000506707 SERTAD4-AS1Q5TG53 156 aa3.55□□□□□ -1.84
USP46-206ENST00000506707 PHF5AQ7RTV0 110 aaKnown RBP3.55□□□□□ -1.84
USP46-206ENST00000506707 SND1-IT1Q9HBX3 110 aa3.55□□□□□ -1.84
USP46-206ENST00000506707 A0A0U1RRA0 63 aa3.54□□□□□ -1.84
USP46-206ENST00000506707 C20orf202A1L168 122 aa3.54□□□□□ -1.84
USP46-206ENST00000506707 SMIM13P0DJ93 91 aa3.54□□□□□ -1.84
USP46-206ENST00000506707 LGALS3P17931 250 aaKnown RBP3.54□□□□□ -1.84
USP46-206ENST00000506707 NMUP48645 174 aa3.54□□□□□ -1.84
USP46-206ENST00000506707 LINC00158P58513 81 aa3.54□□□□□ -1.84
USP46-206ENST00000506707 RPL37AP61513 92 aaKnown RBP3.54□□□□□ -1.84
USP46-206ENST00000506707 FAM19A5Q7Z5A7 132 aaPredicted RBP3.54□□□□□ -1.84
USP46-206ENST00000506707 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
USP46-206ENST00000506707 ATOH7Q8N100 152 aa3.54□□□□□ -1.84
USP46-206ENST00000506707 Q8NDZ9 215 aa3.54□□□□□ -1.84
USP46-206ENST00000506707 C7orf33Q8WU49 177 aa3.54□□□□□ -1.84
USP46-206ENST00000506707 C22orf24Q9Y442 160 aa3.54□□□□□ -1.84
USP46-206ENST00000506707 A0A0J9YXY3 114 aa3.53□□□□□ -1.84
USP46-206ENST00000506707 LINC00587B1AMM8 73 aa3.53□□□□□ -1.84
USP46-206ENST00000506707 AKR1D1P51857 326 aa3.53□□□□□ -1.84
USP46-206ENST00000506707 HNRNPA3P51991 378 aaKnown RBP3.53□□□□□ -1.84
USP46-206ENST00000506707 ANKRD39Q53RE8 183 aa3.53□□□□□ -1.84
USP46-206ENST00000506707 MEIG1Q5JSS6 88 aa3.53□□□□□ -1.84
USP46-206ENST00000506707 ADAMTSL4-AS1Q5T5F5 129 aa3.53□□□□□ -1.84
USP46-206ENST00000506707 MIR7-3HGQ8N6C7 128 aa3.53□□□□□ -1.84
USP46-206ENST00000506707 TTTY13Q9BZ97 58 aa3.53□□□□□ -1.84
USP46-206ENST00000506707 TP73-AS1Q9UF72 201 aa3.53□□□□□ -1.84
USP46-206ENST00000506707 IGLV5-37A0A075B6J1 123 aa3.52□□□□□ -1.85
USP46-206ENST00000506707 LOC107984156A0A0G2JMH3 177 aa3.52□□□□□ -1.85
USP46-206ENST00000506707 M0QXV9 152 aa3.52□□□□□ -1.85
USP46-206ENST00000506707 INAFM2P0DMQ5 153 aa3.52□□□□□ -1.85
USP46-206ENST00000506707 VPREB1P12018 145 aa3.52□□□□□ -1.85
USP46-206ENST00000506707 PRR3P79522 188 aaKnown RBP3.52□□□□□ -1.85
USP46-206ENST00000506707 SRSF9Q13242 221 aaKnown RBP eCLIP3.52□□□□□ -1.85
USP46-206ENST00000506707 MRPL55Q7Z7F7 128 aaKnown RBP3.52□□□□□ -1.85
USP46-206ENST00000506707 ARL17AQ8IVW1 177 aa3.52□□□□□ -1.85
USP46-206ENST00000506707 DAND5Q8N907 189 aa3.52□□□□□ -1.85
USP46-206ENST00000506707 LINC00167Q96N53 147 aa3.52□□□□□ -1.85
USP46-206ENST00000506707 PSORS1C2Q9UIG4 136 aa3.52□□□□□ -1.85
USP46-206ENST00000506707 ZNF815PA8K554 130 aa3.51□□□□□ -1.85
USP46-206ENST00000506707 SCGB1D1O95968 90 aa3.51□□□□□ -1.85
USP46-206ENST00000506707 LBHQ53QV2 105 aaPredicted RBP3.51□□□□□ -1.85
USP46-206ENST00000506707 PCP2Q8IVA1 136 aa3.51□□□□□ -1.85
USP46-206ENST00000506707 LITAFQ99732 161 aa3.51□□□□□ -1.85
USP46-206ENST00000506707 IGLV1-50A0A075B6I6 118 aa3.5□□□□□ -1.85
USP46-206ENST00000506707 GAGE10A6NGK3 116 aa3.5□□□□□ -1.85
USP46-206ENST00000506707 RPL37AP8A6NKH3 93 aa3.5□□□□□ -1.85
USP46-206ENST00000506707 TIMM17BO60830 172 aa3.5□□□□□ -1.85
USP46-206ENST00000506707 UBE2BP63146 152 aa3.5□□□□□ -1.85
USP46-206ENST00000506707 RPL24P83731 157 aaKnown RBP3.5□□□□□ -1.85
USP46-206ENST00000506707 JOSD1Q15040 202 aaPredicted RBP3.5□□□□□ -1.85
USP46-206ENST00000506707 C1orf137Q5JT78 98 aa3.5□□□□□ -1.85
USP46-206ENST00000506707 SOSTDC1Q6X4U4 206 aa3.5□□□□□ -1.85
USP46-206ENST00000506707 M0R378 163 aa3.49□□□□□ -1.85
USP46-206ENST00000506707 IGLV7-43P04211 117 aa3.49□□□□□ -1.85
USP46-206ENST00000506707 BOD1L2Q8IYS8 172 aa3.49□□□□□ -1.85
USP46-206ENST00000506707 NKAPP1Q8N9T2 125 aa3.49□□□□□ -1.85
USP46-206ENST00000506707 IGKV2-28A0A075B6P5 120 aa3.48□□□□□ -1.85
USP46-206ENST00000506707 HSBP1L1C9JCN9 74 aa3.48□□□□□ -1.85
USP46-206ENST00000506707 NDUFC2O95298 119 aa3.48□□□□□ -1.85
USP46-206ENST00000506707 IGKV2D-28P01615 120 aa3.48□□□□□ -1.85
USP46-206ENST00000506707 PYY3Q5JQD4 70 aa3.48□□□□□ -1.85
USP46-206ENST00000506707 SPINK6Q6UWN8 80 aa3.48□□□□□ -1.85
USP46-206ENST00000506707 LINC00308Q8TCZ7 52 aa3.48□□□□□ -1.85
USP46-206ENST00000506707 PKHD1L1Q86WI1 4243 aa3.48□□□□□ -1.85
USP46-206ENST00000506707 MYCBP2O75592 4640 aa3.48□□□□□ -1.85
USP46-206ENST00000506707 LRP1Q07954 4544 aaKnown RBP3.47□□□□□ -1.85
USP46-206ENST00000506707 TRBV10-2A0A0K0K1G8 114 aa3.47□□□□□ -1.85
USP46-206ENST00000506707 KRTAP29-1A8MX34 341 aaPredicted RBP3.47□□□□□ -1.85
USP46-206ENST00000506707 NPC2P61916 151 aa3.47□□□□□ -1.85
USP46-206ENST00000506707 SCGB1D4Q6XE38 83 aa3.47□□□□□ -1.85
USP46-206ENST00000506707 SPANXDQ9BXN6 97 aa3.47□□□□□ -1.85
USP46-206ENST00000506707 SPANXCQ9NY87 97 aa3.47□□□□□ -1.85
USP46-206ENST00000506707 TMEM238C9JI98 176 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms