RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 TSPEAR-AS2P59090 65 aa6.86□□□□□ -1.31
SNCA-210ENST00000506691 ATOH7Q8N100 152 aa6.86□□□□□ -1.31
SNCA-210ENST00000506691 CIRBP-AS1Q8TBR5 109 aa6.86□□□□□ -1.31
SNCA-210ENST00000506691 ZNF815PA8K554 130 aa6.85□□□□□ -1.31
SNCA-210ENST00000506691 CHTF8P0CG12 524 aa6.85□□□□□ -1.31
SNCA-210ENST00000506691 IGKV2D-26A0A0A0MRZ7 120 aa6.84□□□□□ -1.31
SNCA-210ENST00000506691 A0A0J9YXY3 114 aa6.84□□□□□ -1.31
SNCA-210ENST00000506691 PANO1I0J062 215 aa6.84□□□□□ -1.31
SNCA-210ENST00000506691 SMIM13P0DJ93 91 aa6.84□□□□□ -1.31
SNCA-210ENST00000506691 RPL24P83731 157 aaKnown RBP6.84□□□□□ -1.31
SNCA-210ENST00000506691 ANKRD39Q53RE8 183 aa6.84□□□□□ -1.31
SNCA-210ENST00000506691 COPS9Q8WXC6 57 aa6.84□□□□□ -1.31
SNCA-210ENST00000506691 LOC107984156A0A0G2JMH3 177 aa6.83□□□□□ -1.32
SNCA-210ENST00000506691 C9orf129Q5T035 196 aaKnown RBP6.83□□□□□ -1.32
SNCA-210ENST00000506691 Q6ZVH6 145 aa6.83□□□□□ -1.32
SNCA-210ENST00000506691 ARL17AQ8IVW1 177 aa6.83□□□□□ -1.32
SNCA-210ENST00000506691 C7orf33Q8WU49 177 aa6.83□□□□□ -1.32
SNCA-210ENST00000506691 SND1-IT1Q9HBX3 110 aa6.83□□□□□ -1.32
SNCA-210ENST00000506691 TP73-AS1Q9UF72 201 aa6.83□□□□□ -1.32
SNCA-210ENST00000506691 A0A1W2PNN7 141 aa6.82□□□□□ -1.32
SNCA-210ENST00000506691 LBHQ53QV2 105 aaPredicted RBP6.82□□□□□ -1.32
SNCA-210ENST00000506691 SCGB1D4Q6XE38 83 aa6.82□□□□□ -1.32
SNCA-210ENST00000506691 MIR7-3HGQ8N6C7 128 aa6.82□□□□□ -1.32
SNCA-210ENST00000506691 VAMP8Q9BV40 100 aa6.82□□□□□ -1.32
SNCA-210ENST00000506691 XAGE1AQ9HD64 81 aa6.82□□□□□ -1.32
SNCA-210ENST00000506691 IGLV5-37A0A075B6J1 123 aa6.81□□□□□ -1.32
SNCA-210ENST00000506691 TMEM238C9JI98 176 aa6.81□□□□□ -1.32
SNCA-210ENST00000506691 DLEU1O43261 78 aa6.81□□□□□ -1.32
SNCA-210ENST00000506691 MIEN1Q9BRT3 115 aa6.81□□□□□ -1.32
SNCA-210ENST00000506691 PPDPFQ9H3Y8 114 aa6.81□□□□□ -1.32
SNCA-210ENST00000506691 COX8AP10176 69 aa6.8□□□□□ -1.32
SNCA-210ENST00000506691 PYY3Q5JQD4 70 aa6.8□□□□□ -1.32
SNCA-210ENST00000506691 PKHD1L1Q86WI1 4243 aa6.79□□□□□ -1.32
SNCA-210ENST00000506691 A0A0U1RRA0 63 aa6.79□□□□□ -1.32
SNCA-210ENST00000506691 NDUFC2O95298 119 aa6.79□□□□□ -1.32
SNCA-210ENST00000506691 IFITM1P13164 125 aa6.79□□□□□ -1.32
SNCA-210ENST00000506691 S100A12P80511 92 aa6.79□□□□□ -1.32
SNCA-210ENST00000506691 PCP2Q8IVA1 136 aa6.79□□□□□ -1.32
SNCA-210ENST00000506691 BOD1L2Q8IYS8 172 aa6.79□□□□□ -1.32
SNCA-210ENST00000506691 NKAPP1Q8N9T2 125 aa6.79□□□□□ -1.32
SNCA-210ENST00000506691 C22orf24Q9Y442 160 aa6.79□□□□□ -1.32
SNCA-210ENST00000506691 M0QXV9 152 aa6.78□□□□□ -1.32
SNCA-210ENST00000506691 RPL37AP61513 92 aaKnown RBP6.78□□□□□ -1.32
SNCA-210ENST00000506691 SPATA45Q537H7 98 aa6.78□□□□□ -1.32
SNCA-210ENST00000506691 FAM19A5Q7Z5A7 132 aaPredicted RBP6.78□□□□□ -1.32
SNCA-210ENST00000506691 SPANXDQ9BXN6 97 aa6.78□□□□□ -1.32
SNCA-210ENST00000506691 TTTY13Q9BZ97 58 aa6.78□□□□□ -1.32
SNCA-210ENST00000506691 SPANXCQ9NY87 97 aa6.78□□□□□ -1.32
SNCA-210ENST00000506691 PAM16Q9Y3D7 125 aa6.78□□□□□ -1.32
SNCA-210ENST00000506691 TRBV10-2A0A0K0K1G8 114 aa6.77□□□□□ -1.33
SNCA-210ENST00000506691 LOC105371267A0A1B0GV96 52 aa6.77□□□□□ -1.33
SNCA-210ENST00000506691 FAM168BA1KXE4 195 aa6.77□□□□□ -1.33
SNCA-210ENST00000506691 ADAMTSL4-AS1Q5T5F5 129 aa6.77□□□□□ -1.33
SNCA-210ENST00000506691 MRPL55Q7Z7F7 128 aaKnown RBP6.77□□□□□ -1.33
SNCA-210ENST00000506691 LITAFQ99732 161 aa6.77□□□□□ -1.33
SNCA-210ENST00000506691 M0R378 163 aa6.76□□□□□ -1.33
SNCA-210ENST00000506691 MT1HL1P0DM35 61 aa6.76□□□□□ -1.33
SNCA-210ENST00000506691 VPREB1P12018 145 aa6.76□□□□□ -1.33
SNCA-210ENST00000506691 SLC25A34Q6PIV7 304 aa6.76□□□□□ -1.33
SNCA-210ENST00000506691 SPANXB1Q9NS25 103 aaPredicted RBP6.76□□□□□ -1.33
SNCA-210ENST00000506691 CBY1Q9Y3M2 126 aa6.76□□□□□ -1.33
SNCA-210ENST00000506691 UBE2BP63146 152 aa6.75□□□□□ -1.33
SNCA-210ENST00000506691 SRSF9Q13242 221 aaKnown RBP eCLIP6.75□□□□□ -1.33
SNCA-210ENST00000506691 PHF5AQ7RTV0 110 aaKnown RBP6.75□□□□□ -1.33
SNCA-210ENST00000506691 KRTAP7-1Q8IUC3 87 aa6.75□□□□□ -1.33
SNCA-210ENST00000506691 LINC00518Q8N0U6 118 aa6.75□□□□□ -1.33
SNCA-210ENST00000506691 LINC00308Q8TCZ7 52 aa6.75□□□□□ -1.33
SNCA-210ENST00000506691 SMIM6P0DI80 62 aa6.74□□□□□ -1.33
SNCA-210ENST00000506691 DAND5Q8N907 189 aa6.74□□□□□ -1.33
SNCA-210ENST00000506691 HIGD1BQ9P298 99 aa6.74□□□□□ -1.33
SNCA-210ENST00000506691 C14orf144Q96I85 54 aa6.73□□□□□ -1.33
SNCA-210ENST00000506691 LINC00167Q96N53 147 aa6.73□□□□□ -1.33
SNCA-210ENST00000506691 TNXBP22105 4242 aa6.72□□□□□ -1.33
SNCA-210ENST00000506691 IGLV1-50A0A075B6I6 118 aa6.71□□□□□ -1.34
SNCA-210ENST00000506691 HNRNPA3P51991 378 aaKnown RBP6.71□□□□□ -1.34
SNCA-210ENST00000506691 TAL2Q16559 108 aa6.71□□□□□ -1.34
SNCA-210ENST00000506691 PRR3P79522 188 aaKnown RBP6.7□□□□□ -1.34
SNCA-210ENST00000506691 SOSTDC1Q6X4U4 206 aa6.7□□□□□ -1.34
SNCA-210ENST00000506691 MUSTN1Q8IVN3 82 aa6.7□□□□□ -1.34
SNCA-210ENST00000506691 HIST1H4GQ99525 98 aa6.7□□□□□ -1.34
SNCA-210ENST00000506691 UQCR10Q9UDW1 63 aa6.7□□□□□ -1.34
SNCA-210ENST00000506691 PSORS1C2Q9UIG4 136 aa6.7□□□□□ -1.34
SNCA-210ENST00000506691 LRP2P98164 4655 aa6.7□□□□□ -1.34
SNCA-210ENST00000506691 NPC2P61916 151 aa6.69□□□□□ -1.34
SNCA-210ENST00000506691 S100A7L2Q5SY68 101 aa6.69□□□□□ -1.34
SNCA-210ENST00000506691 TMEM126AQ9H061 195 aa6.69□□□□□ -1.34
SNCA-210ENST00000506691 TRAV13-2A0A0B4J235 113 aa6.68□□□□□ -1.34
SNCA-210ENST00000506691 GAGE10A6NGK3 116 aa6.68□□□□□ -1.34
SNCA-210ENST00000506691 RPL37AP8A6NKH3 93 aa6.68□□□□□ -1.34
SNCA-210ENST00000506691 PRYO14603 147 aa6.68□□□□□ -1.34
SNCA-210ENST00000506691 DDTP30046 118 aa6.68□□□□□ -1.34
SNCA-210ENST00000506691 C1orf137Q5JT78 98 aa6.68□□□□□ -1.34
SNCA-210ENST00000506691 Q8NDZ9 215 aa6.68□□□□□ -1.34
SNCA-210ENST00000506691 KCNQ1DNQ9H478 68 aa6.68□□□□□ -1.34
SNCA-210ENST00000506691 RNF213Q63HN8 5207 aa6.68□□□□□ -1.34
SNCA-210ENST00000506691 NCR3O14931 201 aa6.67□□□□□ -1.34
SNCA-210ENST00000506691 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
SNCA-210ENST00000506691 BCE1O60756 84 aa6.67□□□□□ -1.34
SNCA-210ENST00000506691 IGLV6-57P01721 117 aa6.67□□□□□ -1.34
SNCA-210ENST00000506691 REG3GQ6UW15 175 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms