RNA–Protein interactions for RNA: ENST00000505905.1

LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN54, Length 810 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-205ENST00000505905 SCN11AQ9UI33 1791 aa0.5□□□□□ -2.33
LIN54-205ENST00000505905 ARFGEF2Q9Y6D5 1785 aa0.5□□□□□ -2.33
LIN54-205ENST00000505905 PKD1L3Q7Z443 1732 aa0.5□□□□□ -2.33
LIN54-205ENST00000505905 ZNF831Q5JPB2 1677 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 PAPPAQ13219 1627 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 ADAMTS12P58397 1594 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 URB2Q14146 1524 aaKnown RBP0.49□□□□□ -2.33
LIN54-205ENST00000505905 USF3Q68DE3 2245 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 NKTRP30414 1462 aaKnown RBP0.49□□□□□ -2.33
LIN54-205ENST00000505905 CD163L1Q9NR16 1453 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 UMAD1C9J7I0 102 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 IFI6P09912 130 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 HMGA1P17096 107 aaKnown RBP0.49□□□□□ -2.33
LIN54-205ENST00000505905 IFI27P40305 119 aaPredicted RBP0.49□□□□□ -2.33
LIN54-205ENST00000505905 DEFB112Q30KQ8 113 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 ATP5EP2Q5VTU8 51 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 SPTBN2O15020 2390 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 ZC3H13Q5T200 1668 aaKnown RBP0.49□□□□□ -2.33
LIN54-205ENST00000505905 PIK3C2BO00750 1634 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 KIAA0556O60303 1618 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 USP32Q8NFA0 1604 aa0.49□□□□□ -2.33
LIN54-205ENST00000505905 DUOX2Q9NRD8 1548 aa0.48□□□□□ -2.33
LIN54-205ENST00000505905 F8P00451 2351 aa0.48□□□□□ -2.33
LIN54-205ENST00000505905 CLIP1P30622 1438 aa0.48□□□□□ -2.33
LIN54-205ENST00000505905 NDUFB1O75438 58 aa0.48□□□□□ -2.33
LIN54-205ENST00000505905 COX6A2Q02221 97 aa0.48□□□□□ -2.33
LIN54-205ENST00000505905 SETBP1Q9Y6X0 1596 aa0.48□□□□□ -2.33
LIN54-205ENST00000505905 PTPRZ1P23471 2315 aaPredicted RBP0.48□□□□□ -2.33
LIN54-205ENST00000505905 UBR3Q6ZT12 1888 aa0.48□□□□□ -2.33
LIN54-205ENST00000505905 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
LIN54-205ENST00000505905 LRRC37AA6NMS7 1700 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 CACNA1EQ15878 2313 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 A0A087WXM4 84 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 LCE6AA0A183 80 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 K7EQZ3 153 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 COX7BP24311 80 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 PIGYQ3MUY2 71 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 GAFA1Q96PS6 74 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 APCP25054 2843 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 PIEZO2Q9H5I5 2752 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 LRRC7Q96NW7 1537 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 QSER1Q2KHR3 1735 aa0.47□□□□□ -2.33
LIN54-205ENST00000505905 TTC28Q96AY4 2481 aa0.46□□□□□ -2.34
LIN54-205ENST00000505905 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.46□□□□□ -2.34
LIN54-205ENST00000505905 PTPRQQ9UMZ3 2332 aa0.46□□□□□ -2.34
LIN54-205ENST00000505905 Q8IZM0 81 aa0.46□□□□□ -2.34
LIN54-205ENST00000505905 WFDC9Q8NEX5 89 aa0.46□□□□□ -2.34
LIN54-205ENST00000505905 CRIPTQ9P021 101 aa0.46□□□□□ -2.34
LIN54-205ENST00000505905 PRO0255Q9UI72 69 aa0.46□□□□□ -2.34
LIN54-205ENST00000505905 MAGI3Q5TCQ9 1506 aa0.46□□□□□ -2.34
LIN54-205ENST00000505905 POLR1AO95602 1720 aaPredicted RBP0.46□□□□□ -2.34
LIN54-205ENST00000505905 ITSN1Q15811 1721 aa0.46□□□□□ -2.34
LIN54-205ENST00000505905 CHD9Q3L8U1 2897 aa0.46□□□□□ -2.34
LIN54-205ENST00000505905 ANK2Q01484 3957 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 BDP1A6H8Y1 2624 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 ASXL1Q8IXJ9 1541 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 DOT1LQ8TEK3 1739 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 POLQO75417 2590 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 COX8AP10176 69 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 ZNF292O60281 2723 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 CELSR2Q9HCU4 2923 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 ANKRD50Q9ULJ7 1429 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 MADDQ8WXG6 1647 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 CNOT1A5YKK6 2376 aaKnown RBP0.45□□□□□ -2.34
LIN54-205ENST00000505905 BCORQ6W2J9 1755 aa0.45□□□□□ -2.34
LIN54-205ENST00000505905 CSMD3Q7Z407 3707 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 TNCP24821 2201 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 ABCA12Q86UK0 2595 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 SPTBN1Q01082 2364 aaKnown RBP0.44□□□□□ -2.34
LIN54-205ENST00000505905 A0A087WWC5 75 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 SPTY2D1-AS1A0A0U1RR47 76 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 CPSF4LA6NMK7 179 aaKnown RBP0.44□□□□□ -2.34
LIN54-205ENST00000505905 NREPQ16612 68 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 USMG5Q96IX5 58 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 MROH1Q8NDA8 1641 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 DIP2AQ14689 1571 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 CDC42BPGQ6DT37 1551 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 TIAM2Q8IVF5 1701 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 FMN2Q9NZ56 1722 aa0.44□□□□□ -2.34
LIN54-205ENST00000505905 EFCAB5A4FU69 1503 aa0.43□□□□□ -2.34
LIN54-205ENST00000505905 FRAS1Q86XX4 4008 aa0.43□□□□□ -2.34
LIN54-205ENST00000505905 GPR98Q8WXG9 6306 aa0.43□□□□□ -2.34
LIN54-205ENST00000505905 REV3LO60673 3130 aa0.43□□□□□ -2.34
LIN54-205ENST00000505905 BIVM-ERCC5R4GMW8 1640 aa0.43□□□□□ -2.34
LIN54-205ENST00000505905 H3BVH4 76 aa0.43□□□□□ -2.34
LIN54-205ENST00000505905 SPRR1AP35321 89 aa0.43□□□□□ -2.34
LIN54-205ENST00000505905 Q5VSD8 79 aa0.43□□□□□ -2.34
LIN54-205ENST00000505905 HILPDAQ9Y5L2 63 aa0.43□□□□□ -2.34
LIN54-205ENST00000505905 PARP4Q9UKK3 1724 aaKnown RBP0.43□□□□□ -2.34
LIN54-205ENST00000505905 COL14A1Q05707 1796 aaKnown RBP0.42□□□□□ -2.34
LIN54-205ENST00000505905 ABCA9Q8IUA7 1624 aa0.42□□□□□ -2.34
LIN54-205ENST00000505905 NAV2Q8IVL1 2488 aa0.42□□□□□ -2.34
LIN54-205ENST00000505905 INO80Q9ULG1 1556 aaPredicted RBP0.42□□□□□ -2.34
LIN54-205ENST00000505905 GVINP1Q7Z2Y8 2422 aa0.42□□□□□ -2.34
LIN54-205ENST00000505905 HFM1A2PYH4 1435 aa0.42□□□□□ -2.34
LIN54-205ENST00000505905 FXYD6-FXYD2A0A087WZ82 144 aa0.42□□□□□ -2.34
LIN54-205ENST00000505905 I3L3M4 83 aa0.42□□□□□ -2.34
LIN54-205ENST00000505905 COX6B1P14854 86 aa0.42□□□□□ -2.34
LIN54-205ENST00000505905 MRPL34Q9BQ48 92 aaKnown RBP0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms