RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 Q6ZVH6 145 aa6.05□□□□□ -1.44
ARHGEF28-206ENST00000504003 PCP2Q8IVA1 136 aa6.05□□□□□ -1.44
ARHGEF28-206ENST00000504003 Q8N814 137 aa6.05□□□□□ -1.44
ARHGEF28-206ENST00000504003 ZNF625Q96I27 306 aaPredicted RBP6.05□□□□□ -1.44
ARHGEF28-206ENST00000504003 LRCOL1A6NCL2 159 aa6.04□□□□□ -1.44
ARHGEF28-206ENST00000504003 GAGE10A6NGK3 116 aa6.04□□□□□ -1.44
ARHGEF28-206ENST00000504003 K7EP34 96 aa6.04□□□□□ -1.44
ARHGEF28-206ENST00000504003 TIMM17BO60830 172 aa6.04□□□□□ -1.44
ARHGEF28-206ENST00000504003 LINC00158P58513 81 aa6.04□□□□□ -1.44
ARHGEF28-206ENST00000504003 TSPEAR-AS2P59090 65 aa6.04□□□□□ -1.44
ARHGEF28-206ENST00000504003 CNBPP62633 177 aaKnown RBP6.04□□□□□ -1.44
ARHGEF28-206ENST00000504003 SRSF9Q13242 221 aaKnown RBP eCLIP6.04□□□□□ -1.44
ARHGEF28-206ENST00000504003 C2orf82Q6UX34 121 aa6.04□□□□□ -1.44
ARHGEF28-206ENST00000504003 ERG28Q9UKR5 140 aa6.04□□□□□ -1.44
ARHGEF28-206ENST00000504003 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.03□□□□□ -1.44
ARHGEF28-206ENST00000504003 A0A0J9YXY3 114 aa6.03□□□□□ -1.44
ARHGEF28-206ENST00000504003 SCGB1A1P11684 91 aa6.03□□□□□ -1.44
ARHGEF28-206ENST00000504003 UNQ6190/PRO20217Q6UXQ8 127 aa6.03□□□□□ -1.44
ARHGEF28-206ENST00000504003 LINC00526Q96FQ7 95 aa6.03□□□□□ -1.44
ARHGEF28-206ENST00000504003 HIGD1BQ9P298 99 aa6.03□□□□□ -1.44
ARHGEF28-206ENST00000504003 PFN2P35080 140 aa6.02□□□□□ -1.45
ARHGEF28-206ENST00000504003 Q6ZRU5 148 aa6.02□□□□□ -1.45
ARHGEF28-206ENST00000504003 HIST1H4GQ99525 98 aa6.02□□□□□ -1.45
ARHGEF28-206ENST00000504003 DNAH6Q9C0G6 4158 aa6.01□□□□□ -1.45
ARHGEF28-206ENST00000504003 IGLV5-52A0A0A0MRZ9 124 aa6.01□□□□□ -1.45
ARHGEF28-206ENST00000504003 LOC107984640A0A0U1RRK4 108 aa6.01□□□□□ -1.45
ARHGEF28-206ENST00000504003 NDUFC2-KCTD14E9PQ53 114 aa6.01□□□□□ -1.45
ARHGEF28-206ENST00000504003 RTL8CO15255 209 aa6.01□□□□□ -1.45
ARHGEF28-206ENST00000504003 TTTY13Q9BZ97 58 aa6.01□□□□□ -1.45
ARHGEF28-206ENST00000504003 C6orf48Q9UBA6 75 aa6.01□□□□□ -1.45
ARHGEF28-206ENST00000504003 TLX1NBP0CAT3 122 aa6□□□□□ -1.45
ARHGEF28-206ENST00000504003 SMIM13P0DJ93 91 aa6□□□□□ -1.45
ARHGEF28-206ENST00000504003 IFITM1P13164 125 aa6□□□□□ -1.45
ARHGEF28-206ENST00000504003 RPL18AQ02543 176 aaKnown RBP6□□□□□ -1.45
ARHGEF28-206ENST00000504003 TAL2Q16559 108 aa6□□□□□ -1.45
ARHGEF28-206ENST00000504003 SPANXB1Q9NS25 103 aaPredicted RBP6□□□□□ -1.45
ARHGEF28-206ENST00000504003 LINC00474Q9P2X8 69 aa6□□□□□ -1.45
ARHGEF28-206ENST00000504003 A0A0U1RRA0 63 aa5.99□□□□□ -1.45
ARHGEF28-206ENST00000504003 A0A1W2PPM0 123 aa5.99□□□□□ -1.45
ARHGEF28-206ENST00000504003 RPL24P83731 157 aaKnown RBP5.99□□□□□ -1.45
ARHGEF28-206ENST00000504003 WFDC2Q14508 124 aa5.99□□□□□ -1.45
ARHGEF28-206ENST00000504003 C10orf25Q5T742 122 aa5.99□□□□□ -1.45
ARHGEF28-206ENST00000504003 C9orf163Q8N9P6 203 aa5.99□□□□□ -1.45
ARHGEF28-206ENST00000504003 SPANXDQ9BXN6 97 aa5.99□□□□□ -1.45
ARHGEF28-206ENST00000504003 SPANXCQ9NY87 97 aa5.99□□□□□ -1.45
ARHGEF28-206ENST00000504003 RYR2Q92736 4967 aa5.98□□□□□ -1.45
ARHGEF28-206ENST00000504003 FABP2P12104 132 aa5.98□□□□□ -1.45
ARHGEF28-206ENST00000504003 C9orf116Q5BN46 136 aaPredicted RBP5.98□□□□□ -1.45
ARHGEF28-206ENST00000504003 MIR7-3HGQ8N6C7 128 aa5.98□□□□□ -1.45
ARHGEF28-206ENST00000504003 CDIP1Q9H305 208 aa5.98□□□□□ -1.45
ARHGEF28-206ENST00000504003 KMT2AQ03164 3969 aa5.97□□□□□ -1.45
ARHGEF28-206ENST00000504003 GAGE2BQ13066 116 aa5.97□□□□□ -1.45
ARHGEF28-206ENST00000504003 GAGE2EQ4V326 116 aa5.97□□□□□ -1.45
ARHGEF28-206ENST00000504003 DPH3Q96FX2 82 aa5.97□□□□□ -1.45
ARHGEF28-206ENST00000504003 PPDPFQ9H3Y8 114 aa5.97□□□□□ -1.45
ARHGEF28-206ENST00000504003 GAGE2DQ9UEU5 116 aa5.97□□□□□ -1.45
ARHGEF28-206ENST00000504003 C16orf90A8MZG2 172 aa5.96□□□□□ -1.46
ARHGEF28-206ENST00000504003 H3BUT2 72 aa5.96□□□□□ -1.46
ARHGEF28-206ENST00000504003 TP73-AS1Q9UF72 201 aa5.96□□□□□ -1.46
ARHGEF28-206ENST00000504003 SPCS1Q9Y6A9 102 aa5.96□□□□□ -1.46
ARHGEF28-206ENST00000504003 DNAH2Q9P225 4427 aa5.96□□□□□ -1.46
ARHGEF28-206ENST00000504003 SACSQ9NZJ4 4579 aa5.96□□□□□ -1.46
ARHGEF28-206ENST00000504003 J3QR89 54 aa5.95□□□□□ -1.46
ARHGEF28-206ENST00000504003 CEND1Q8N111 149 aa5.95□□□□□ -1.46
ARHGEF28-206ENST00000504003 LINC00308Q8TCZ7 52 aa5.95□□□□□ -1.46
ARHGEF28-206ENST00000504003 SND1-IT1Q9HBX3 110 aa5.95□□□□□ -1.46
ARHGEF28-206ENST00000504003 DNAH10Q8IVF4 4471 aa5.94□□□□□ -1.46
ARHGEF28-206ENST00000504003 LOC107984156A0A0G2JMH3 177 aa5.94□□□□□ -1.46
ARHGEF28-206ENST00000504003 F8W1H4 67 aa5.94□□□□□ -1.46
ARHGEF28-206ENST00000504003 NPC2P61916 151 aa5.94□□□□□ -1.46
ARHGEF28-206ENST00000504003 ADAMTSL4-AS1Q5T5F5 129 aa5.94□□□□□ -1.46
ARHGEF28-206ENST00000504003 Q6ZRP5 223 aa5.94□□□□□ -1.46
ARHGEF28-206ENST00000504003 MUSTN1Q8IVN3 82 aa5.94□□□□□ -1.46
ARHGEF28-206ENST00000504003 ARL17AQ8IVW1 177 aa5.94□□□□□ -1.46
ARHGEF28-206ENST00000504003 DAND5Q8N907 189 aa5.94□□□□□ -1.46
ARHGEF28-206ENST00000504003 LITAFQ99732 161 aa5.94□□□□□ -1.46
ARHGEF28-206ENST00000504003 IGKV2-24A0A0C4DH68 120 aa5.93□□□□□ -1.46
ARHGEF28-206ENST00000504003 NDUFC2O95298 119 aa5.93□□□□□ -1.46
ARHGEF28-206ENST00000504003 NKAPP1Q8N9T2 125 aa5.93□□□□□ -1.46
ARHGEF28-206ENST00000504003 XAGE1AQ9HD64 81 aa5.93□□□□□ -1.46
ARHGEF28-206ENST00000504003 SDIM1Q6ZPB5 146 aa5.92□□□□□ -1.46
ARHGEF28-206ENST00000504003 SIGMAR1Q99720 223 aa5.92□□□□□ -1.46
ARHGEF28-206ENST00000504003 DNAH17Q9UFH2 4485 aa5.91□□□□□ -1.46
ARHGEF28-206ENST00000504003 TRAV13-2A0A0B4J235 113 aa5.91□□□□□ -1.46
ARHGEF28-206ENST00000504003 A0A1B0GWB2 263 aa5.91□□□□□ -1.46
ARHGEF28-206ENST00000504003 RAB37Q96AX2 223 aa5.91□□□□□ -1.46
ARHGEF28-206ENST00000504003 A0A096LNI7 61 aa5.9□□□□□ -1.46
ARHGEF28-206ENST00000504003 TRBV10-2A0A0K0K1G8 114 aa5.9□□□□□ -1.46
ARHGEF28-206ENST00000504003 A0A1B0GV72 72 aa5.9□□□□□ -1.46
ARHGEF28-206ENST00000504003 A4D1N5 150 aa5.9□□□□□ -1.46
ARHGEF28-206ENST00000504003 S100A7L2Q5SY68 101 aa5.9□□□□□ -1.46
ARHGEF28-206ENST00000504003 MTURNQ8N3F0 131 aa5.9□□□□□ -1.46
ARHGEF28-206ENST00000504003 FXYD2P54710 66 aa5.89□□□□□ -1.47
ARHGEF28-206ENST00000504003 LINC01620Q4KN68 170 aa5.89□□□□□ -1.47
ARHGEF28-206ENST00000504003 C9orf129Q5T035 196 aaKnown RBP5.89□□□□□ -1.47
ARHGEF28-206ENST00000504003 OR13C6PQ8NH95 151 aa5.89□□□□□ -1.47
ARHGEF28-206ENST00000504003 FRAS1Q86XX4 4008 aa5.88□□□□□ -1.47
ARHGEF28-206ENST00000504003 A0A0B4J2C4 111 aa5.88□□□□□ -1.47
ARHGEF28-206ENST00000504003 M0R378 163 aa5.88□□□□□ -1.47
ARHGEF28-206ENST00000504003 TMEM126AQ9H061 195 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms