RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 E9PLD3 99 aa6.67□□□□□ -1.34
UBE2D3-212ENST00000502563 H0Y8G0 127 aa6.67□□□□□ -1.34
UBE2D3-212ENST00000502563 C3orf79P0CE67 100 aa6.67□□□□□ -1.34
UBE2D3-212ENST00000502563 KRTAP7-1Q8IUC3 87 aa6.67□□□□□ -1.34
UBE2D3-212ENST00000502563 MYMXA0A1B0GTQ4 84 aa6.66□□□□□ -1.34
UBE2D3-212ENST00000502563 NDUFA12Q9UI09 145 aa6.66□□□□□ -1.34
UBE2D3-212ENST00000502563 LOC107984156A0A0G2JMH3 177 aa6.65□□□□□ -1.34
UBE2D3-212ENST00000502563 FAM168BA1KXE4 195 aa6.65□□□□□ -1.34
UBE2D3-212ENST00000502563 C20orf202A1L168 122 aa6.65□□□□□ -1.34
UBE2D3-212ENST00000502563 J3QQQ9 107 aa6.65□□□□□ -1.34
UBE2D3-212ENST00000502563 M0QXV9 152 aa6.65□□□□□ -1.34
UBE2D3-212ENST00000502563 LBHQ53QV2 105 aaPredicted RBP6.65□□□□□ -1.34
UBE2D3-212ENST00000502563 ARL17AQ8IVW1 177 aa6.65□□□□□ -1.34
UBE2D3-212ENST00000502563 HIST3H2BBQ8N257 126 aa6.65□□□□□ -1.34
UBE2D3-212ENST00000502563 S100A6P06703 90 aa6.64□□□□□ -1.35
UBE2D3-212ENST00000502563 XAGE1AQ9HD64 81 aa6.64□□□□□ -1.35
UBE2D3-212ENST00000502563 KRTAP29-1A8MX34 341 aaPredicted RBP6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 OXTP01178 125 aa6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 SNRPEP62304 92 aaKnown RBP6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 SRSF9Q13242 221 aaKnown RBP eCLIP6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 SERTAD4-AS1Q5TG53 156 aa6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 SPINK6Q6UWN8 80 aa6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 PHF5AQ7RTV0 110 aaKnown RBP6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 FAM19A5Q7Z5A7 132 aaPredicted RBP6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 MRPL55Q7Z7F7 128 aaKnown RBP6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 HIST1H2BLQ99880 126 aa6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 PMCHL2Q9BQD1 86 aa6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 SND1-IT1Q9HBX3 110 aa6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 C22orf24Q9Y442 160 aa6.63□□□□□ -1.35
UBE2D3-212ENST00000502563 LGALS3P17931 250 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-212ENST00000502563 S100A2P29034 98 aa6.62□□□□□ -1.35
UBE2D3-212ENST00000502563 PFN2P35080 140 aa6.62□□□□□ -1.35
UBE2D3-212ENST00000502563 TSPEAR-AS2P59090 65 aa6.62□□□□□ -1.35
UBE2D3-212ENST00000502563 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-212ENST00000502563 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
UBE2D3-212ENST00000502563 C5orf52A6NGY3 159 aa6.61□□□□□ -1.35
UBE2D3-212ENST00000502563 VPREB1P12018 145 aa6.61□□□□□ -1.35
UBE2D3-212ENST00000502563 KRTDAPP60985 99 aa6.61□□□□□ -1.35
UBE2D3-212ENST00000502563 FLG2Q5D862 2391 aaPredicted RBP6.61□□□□□ -1.35
UBE2D3-212ENST00000502563 IGKV2D-26A0A0A0MRZ7 120 aa6.6□□□□□ -1.35
UBE2D3-212ENST00000502563 HNRNPA3P51991 378 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-212ENST00000502563 LINC00158P58513 81 aa6.6□□□□□ -1.35
UBE2D3-212ENST00000502563 MEIG1Q5JSS6 88 aa6.6□□□□□ -1.35
UBE2D3-212ENST00000502563 MYCBP2O75592 4640 aa6.6□□□□□ -1.35
UBE2D3-212ENST00000502563 TIMM17BO60830 172 aa6.59□□□□□ -1.35
UBE2D3-212ENST00000502563 SMIM13P0DJ93 91 aa6.59□□□□□ -1.35
UBE2D3-212ENST00000502563 UBE2BP63146 152 aa6.59□□□□□ -1.35
UBE2D3-212ENST00000502563 MIR7-3HGQ8N6C7 128 aa6.59□□□□□ -1.35
UBE2D3-212ENST00000502563 NKAPP1Q8N9T2 125 aa6.59□□□□□ -1.35
UBE2D3-212ENST00000502563 PPDPFQ9H3Y8 114 aa6.59□□□□□ -1.35
UBE2D3-212ENST00000502563 IGLV7-43P04211 117 aa6.58□□□□□ -1.36
UBE2D3-212ENST00000502563 C1orf137Q5JT78 98 aa6.58□□□□□ -1.36
UBE2D3-212ENST00000502563 A0A0J9YXY3 114 aa6.57□□□□□ -1.36
UBE2D3-212ENST00000502563 TRBV10-2A0A0K0K1G8 114 aa6.57□□□□□ -1.36
UBE2D3-212ENST00000502563 NDUFC2O95298 119 aa6.57□□□□□ -1.36
UBE2D3-212ENST00000502563 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
UBE2D3-212ENST00000502563 LINC00167Q96N53 147 aa6.57□□□□□ -1.36
UBE2D3-212ENST00000502563 PKHD1L1Q86WI1 4243 aa6.57□□□□□ -1.36
UBE2D3-212ENST00000502563 IGLV1-50A0A075B6I6 118 aa6.56□□□□□ -1.36
UBE2D3-212ENST00000502563 REG3GQ6UW15 175 aa6.56□□□□□ -1.36
UBE2D3-212ENST00000502563 M0R378 163 aa6.55□□□□□ -1.36
UBE2D3-212ENST00000502563 BCE1O60756 84 aa6.55□□□□□ -1.36
UBE2D3-212ENST00000502563 DIRC1Q969H9 104 aa6.55□□□□□ -1.36
UBE2D3-212ENST00000502563 LITAFQ99732 161 aa6.55□□□□□ -1.36
UBE2D3-212ENST00000502563 DMBT1Q9UGM3 2413 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-212ENST00000502563 ZNF815PA8K554 130 aa6.54□□□□□ -1.36
UBE2D3-212ENST00000502563 ZNF861PO60384 105 aa6.54□□□□□ -1.36
UBE2D3-212ENST00000502563 Q6ZVH6 145 aa6.54□□□□□ -1.36
UBE2D3-212ENST00000502563 BOD1L2Q8IYS8 172 aa6.54□□□□□ -1.36
UBE2D3-212ENST00000502563 Q8NDZ9 215 aa6.54□□□□□ -1.36
UBE2D3-212ENST00000502563 LINC01600Q96MT4 127 aa6.54□□□□□ -1.36
UBE2D3-212ENST00000502563 MIEN1Q9BRT3 115 aa6.54□□□□□ -1.36
UBE2D3-212ENST00000502563 KRTAP4-2Q9BYR5 136 aa6.54□□□□□ -1.36
UBE2D3-212ENST00000502563 H0Y9J4 135 aa6.53□□□□□ -1.36
UBE2D3-212ENST00000502563 KRTAP13-1Q8IUC0 172 aa6.53□□□□□ -1.36
UBE2D3-212ENST00000502563 SPANXB1Q9NS25 103 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-212ENST00000502563 A0A0U1RRA0 63 aa6.52□□□□□ -1.37
UBE2D3-212ENST00000502563 RPL28P46779 137 aaKnown RBP6.52□□□□□ -1.37
UBE2D3-212ENST00000502563 ANKRD39Q53RE8 183 aa6.52□□□□□ -1.37
UBE2D3-212ENST00000502563 COPS9Q8WXC6 57 aa6.52□□□□□ -1.37
UBE2D3-212ENST00000502563 SPANXDQ9BXN6 97 aa6.52□□□□□ -1.37
UBE2D3-212ENST00000502563 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
UBE2D3-212ENST00000502563 SPANXCQ9NY87 97 aa6.52□□□□□ -1.37
UBE2D3-212ENST00000502563 LRP1Q07954 4544 aaKnown RBP6.51□□□□□ -1.37
UBE2D3-212ENST00000502563 HSBP1L1C9JCN9 74 aa6.51□□□□□ -1.37
UBE2D3-212ENST00000502563 TMEM238C9JI98 176 aa6.51□□□□□ -1.37
UBE2D3-212ENST00000502563 PRYO14603 147 aa6.51□□□□□ -1.37
UBE2D3-212ENST00000502563 SPRR1AP35321 89 aa6.51□□□□□ -1.37
UBE2D3-212ENST00000502563 ADAMTSL4-AS1Q5T5F5 129 aa6.51□□□□□ -1.37
UBE2D3-212ENST00000502563 TMEM126AQ9H061 195 aa6.51□□□□□ -1.37
UBE2D3-212ENST00000502563 CBY1Q9Y3M2 126 aa6.51□□□□□ -1.37
UBE2D3-212ENST00000502563 RPL37AP8A6NKH3 93 aa6.5□□□□□ -1.37
UBE2D3-212ENST00000502563 IFITM1P13164 125 aa6.5□□□□□ -1.37
UBE2D3-212ENST00000502563 S100A12P80511 92 aa6.5□□□□□ -1.37
UBE2D3-212ENST00000502563 FAT3Q8TDW7 4589 aa6.5□□□□□ -1.37
UBE2D3-212ENST00000502563 IGKV2-28A0A075B6P5 120 aa6.49□□□□□ -1.37
UBE2D3-212ENST00000502563 GAGE10A6NGK3 116 aa6.49□□□□□ -1.37
UBE2D3-212ENST00000502563 IGKV2D-28P01615 120 aa6.49□□□□□ -1.37
UBE2D3-212ENST00000502563 MT1HL1P0DM35 61 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms