RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 ANKRD39Q53RE8 183 aa8.83□□□□□ -1
RNF4-202ENST00000502316 PHF5AQ7RTV0 110 aaKnown RBP8.83□□□□□ -1
RNF4-202ENST00000502316 IGLV5-37A0A075B6J1 123 aa8.82□□□□□ -1
RNF4-202ENST00000502316 TP73-AS1Q9UF72 201 aa8.82□□□□□ -1
RNF4-202ENST00000502316 A0A0J9YXY3 114 aa8.81□□□□□ -1
RNF4-202ENST00000502316 A0A0U1RRA0 63 aa8.81□□□□□ -1
RNF4-202ENST00000502316 MIR7-3HGQ8N6C7 128 aa8.81□□□□□ -1
RNF4-202ENST00000502316 TMA7Q9Y2S6 64 aaKnown RBP8.81□□□□□ -1
RNF4-202ENST00000502316 C22orf24Q9Y442 160 aa8.81□□□□□ -1
RNF4-202ENST00000502316 PKHD1L1Q86WI1 4243 aa8.81□□□□□ -1
RNF4-202ENST00000502316 MYCBP2O75592 4640 aa8.8□□□□□ -1
RNF4-202ENST00000502316 ZNF815PA8K554 130 aa8.79□□□□□ -1
RNF4-202ENST00000502316 SCGB1D1O95968 90 aa8.79□□□□□ -1
RNF4-202ENST00000502316 VPREB1P12018 145 aa8.79□□□□□ -1
RNF4-202ENST00000502316 PRR3P79522 188 aaKnown RBP8.79□□□□□ -1
RNF4-202ENST00000502316 TTTY13Q9BZ97 58 aa8.79□□□□□ -1
RNF4-202ENST00000502316 LOC107984156A0A0G2JMH3 177 aa8.78□□□□□ -1
RNF4-202ENST00000502316 LBHQ53QV2 105 aaPredicted RBP8.78□□□□□ -1
RNF4-202ENST00000502316 MRPL55Q7Z7F7 128 aaKnown RBP8.78□□□□□ -1
RNF4-202ENST00000502316 KRTAP11-1Q8IUC1 163 aa8.78□□□□□ -1
RNF4-202ENST00000502316 ARL17AQ8IVW1 177 aa8.78□□□□□ -1
RNF4-202ENST00000502316 Q8NDZ9 215 aa8.78□□□□□ -1
RNF4-202ENST00000502316 HSBP1L1C9JCN9 74 aa8.77□□□□□ -1.01
RNF4-202ENST00000502316 TIMM17BO60830 172 aa8.77□□□□□ -1.01
RNF4-202ENST00000502316 RPL24P83731 157 aaKnown RBP8.77□□□□□ -1.01
RNF4-202ENST00000502316 LITAFQ99732 161 aa8.77□□□□□ -1.01
RNF4-202ENST00000502316 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1.01
RNF4-202ENST00000502316 ADAMTSL4-AS1Q5T5F5 129 aa8.76□□□□□ -1.01
RNF4-202ENST00000502316 DAND5Q8N907 189 aa8.76□□□□□ -1.01
RNF4-202ENST00000502316 NKAPP1Q8N9T2 125 aa8.76□□□□□ -1.01
RNF4-202ENST00000502316 INAFM2P0DMQ5 153 aa8.75□□□□□ -1.01
RNF4-202ENST00000502316 UBE2BP63146 152 aa8.75□□□□□ -1.01
RNF4-202ENST00000502316 JOSD1Q15040 202 aaPredicted RBP8.75□□□□□ -1.01
RNF4-202ENST00000502316 PCP2Q8IVA1 136 aa8.75□□□□□ -1.01
RNF4-202ENST00000502316 LINC00167Q96N53 147 aa8.75□□□□□ -1.01
RNF4-202ENST00000502316 HNRNPA3P51991 378 aaKnown RBP8.74□□□□□ -1.01
RNF4-202ENST00000502316 BOD1L2Q8IYS8 172 aa8.74□□□□□ -1.01
RNF4-202ENST00000502316 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
RNF4-202ENST00000502316 SOSTDC1Q6X4U4 206 aa8.72□□□□□ -1.01
RNF4-202ENST00000502316 SCGB1D4Q6XE38 83 aa8.72□□□□□ -1.01
RNF4-202ENST00000502316 MIEN1Q9BRT3 115 aa8.72□□□□□ -1.01
RNF4-202ENST00000502316 GAGE10A6NGK3 116 aa8.71□□□□□ -1.02
RNF4-202ENST00000502316 EIF4EBP3O60516 100 aaPredicted RBP8.71□□□□□ -1.02
RNF4-202ENST00000502316 C1orf137Q5JT78 98 aa8.71□□□□□ -1.02
RNF4-202ENST00000502316 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
RNF4-202ENST00000502316 IGLV1-50A0A075B6I6 118 aa8.7□□□□□ -1.02
RNF4-202ENST00000502316 RPL37AP8A6NKH3 93 aa8.7□□□□□ -1.02
RNF4-202ENST00000502316 TMEM238C9JI98 176 aa8.7□□□□□ -1.02
RNF4-202ENST00000502316 M0R378 163 aa8.7□□□□□ -1.02
RNF4-202ENST00000502316 NDUFC2O95298 119 aa8.7□□□□□ -1.02
RNF4-202ENST00000502316 PYY3Q5JQD4 70 aa8.7□□□□□ -1.02
RNF4-202ENST00000502316 LINC00308Q8TCZ7 52 aa8.7□□□□□ -1.02
RNF4-202ENST00000502316 SPANXDQ9BXN6 97 aa8.7□□□□□ -1.02
RNF4-202ENST00000502316 SPANXCQ9NY87 97 aa8.7□□□□□ -1.02
RNF4-202ENST00000502316 FAT3Q8TDW7 4589 aa8.7□□□□□ -1.02
RNF4-202ENST00000502316 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.02
RNF4-202ENST00000502316 IGKV2-28A0A075B6P5 120 aa8.68□□□□□ -1.02
RNF4-202ENST00000502316 TRBV10-2A0A0K0K1G8 114 aa8.68□□□□□ -1.02
RNF4-202ENST00000502316 IGKV2D-28P01615 120 aa8.68□□□□□ -1.02
RNF4-202ENST00000502316 IGLV7-43P04211 117 aa8.68□□□□□ -1.02
RNF4-202ENST00000502316 NPC2P61916 151 aa8.68□□□□□ -1.02
RNF4-202ENST00000502316 Q6ZVH6 145 aa8.68□□□□□ -1.02
RNF4-202ENST00000502316 PPDPFQ9H3Y8 114 aa8.68□□□□□ -1.02
RNF4-202ENST00000502316 SPANXB1Q9NS25 103 aaPredicted RBP8.68□□□□□ -1.02
RNF4-202ENST00000502316 NCR3O14931 201 aa8.67□□□□□ -1.02
RNF4-202ENST00000502316 COX8AP10176 69 aa8.67□□□□□ -1.02
RNF4-202ENST00000502316 SPINK6Q6UWN8 80 aa8.67□□□□□ -1.02
RNF4-202ENST00000502316 VAMP8Q9BV40 100 aa8.67□□□□□ -1.02
RNF4-202ENST00000502316 DLEU1O43261 78 aa8.66□□□□□ -1.02
RNF4-202ENST00000502316 SPATA45Q537H7 98 aa8.66□□□□□ -1.02
RNF4-202ENST00000502316 PAM16Q9Y3D7 125 aa8.66□□□□□ -1.02
RNF4-202ENST00000502316 BCE1O60756 84 aa8.65□□□□□ -1.02
RNF4-202ENST00000502316 IFITM1P13164 125 aa8.65□□□□□ -1.02
RNF4-202ENST00000502316 COPS9Q8WXC6 57 aa8.64□□□□□ -1.03
RNF4-202ENST00000502316 TMEM126AQ9H061 195 aa8.64□□□□□ -1.03
RNF4-202ENST00000502316 TRBV10-3A0A0K0K1G6 114 aa8.63□□□□□ -1.03
RNF4-202ENST00000502316 REG3GQ6UW15 175 aa8.63□□□□□ -1.03
RNF4-202ENST00000502316 KCNQ1DNQ9H478 68 aa8.63□□□□□ -1.03
RNF4-202ENST00000502316 PRYO14603 147 aa8.62□□□□□ -1.03
RNF4-202ENST00000502316 ZNF861PO60384 105 aa8.62□□□□□ -1.03
RNF4-202ENST00000502316 IGLV6-57P01721 117 aa8.62□□□□□ -1.03
RNF4-202ENST00000502316 KRTAP13-1Q8IUC0 172 aa8.62□□□□□ -1.03
RNF4-202ENST00000502316 C14orf144Q96I85 54 aa8.62□□□□□ -1.03
RNF4-202ENST00000502316 DDTP30046 118 aa8.61□□□□□ -1.03
RNF4-202ENST00000502316 DIRC1Q969H9 104 aa8.61□□□□□ -1.03
RNF4-202ENST00000502316 KRTAP29-1A8MX34 341 aaPredicted RBP8.6□□□□□ -1.03
RNF4-202ENST00000502316 H0Y9J4 135 aa8.6□□□□□ -1.03
RNF4-202ENST00000502316 SPRR1AP35321 89 aa8.6□□□□□ -1.03
RNF4-202ENST00000502316 RPL28P46779 137 aaKnown RBP8.6□□□□□ -1.03
RNF4-202ENST00000502316 MUSTN1Q8IVN3 82 aa8.6□□□□□ -1.03
RNF4-202ENST00000502316 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
RNF4-202ENST00000502316 KRTAP4-16G5E9R7 235 aaPredicted RBP8.59□□□□□ -1.03
RNF4-202ENST00000502316 OXTP01178 125 aa8.59□□□□□ -1.03
RNF4-202ENST00000502316 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
RNF4-202ENST00000502316 SLC25A34Q6PIV7 304 aa8.59□□□□□ -1.03
RNF4-202ENST00000502316 LINC00518Q8N0U6 118 aa8.59□□□□□ -1.03
RNF4-202ENST00000502316 S100A12P80511 92 aa8.58□□□□□ -1.04
RNF4-202ENST00000502316 LINC00337Q8N6G1 96 aa8.58□□□□□ -1.04
RNF4-202ENST00000502316 HIGD1BQ9P298 99 aa8.58□□□□□ -1.04
RNF4-202ENST00000502316 UBE2AP49459 152 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms