RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 MYMXA0A1B0GTQ4 84 aa11.33□□□□□ -0.6
PRKCB-209ENST00000498058 RPL18AQ02543 176 aaKnown RBP11.33□□□□□ -0.6
PRKCB-209ENST00000498058 PYY3Q5JQD4 70 aa11.33□□□□□ -0.6
PRKCB-209ENST00000498058 C2orf82Q6UX34 121 aa11.33□□□□□ -0.6
PRKCB-209ENST00000498058 UNQ6190/PRO20217Q6UXQ8 127 aa11.33□□□□□ -0.6
PRKCB-209ENST00000498058 KRTAP11-1Q8IUC1 163 aa11.33□□□□□ -0.6
PRKCB-209ENST00000498058 NDUFA12Q9UI09 145 aa11.33□□□□□ -0.6
PRKCB-209ENST00000498058 HERV-K104P63124 156 aa11.32□□□□□ -0.6
PRKCB-209ENST00000498058 VAMP8Q9BV40 100 aa11.32□□□□□ -0.6
PRKCB-209ENST00000498058 C10orf25Q5T742 122 aa11.31□□□□□ -0.6
PRKCB-209ENST00000498058 LPAP08519 4548 aa11.31□□□□□ -0.6
PRKCB-209ENST00000498058 ANKRD39Q53RE8 183 aa11.3□□□□□ -0.6
PRKCB-209ENST00000498058 ZNF625Q96I27 306 aaPredicted RBP11.3□□□□□ -0.6
PRKCB-209ENST00000498058 FAM168BA1KXE4 195 aa11.29□□□□□ -0.6
PRKCB-209ENST00000498058 LINC00587B1AMM8 73 aa11.29□□□□□ -0.6
PRKCB-209ENST00000498058 TSPEAR-AS2P59090 65 aa11.29□□□□□ -0.6
PRKCB-209ENST00000498058 C1orf137Q5JT78 98 aa11.29□□□□□ -0.6
PRKCB-209ENST00000498058 C6orf48Q9UBA6 75 aa11.29□□□□□ -0.6
PRKCB-209ENST00000498058 LOC105371267A0A1B0GV96 52 aa11.28□□□□□ -0.6
PRKCB-209ENST00000498058 S100A12P80511 92 aa11.28□□□□□ -0.6
PRKCB-209ENST00000498058 IGKV2D-26A0A0A0MRZ7 120 aa11.27□□□□□ -0.61
PRKCB-209ENST00000498058 KRTAP7-1Q8IUC3 87 aa11.27□□□□□ -0.61
PRKCB-209ENST00000498058 ZNF815PA8K554 130 aa11.26□□□□□ -0.61
PRKCB-209ENST00000498058 SMIM6P0DI80 62 aa11.26□□□□□ -0.61
PRKCB-209ENST00000498058 COX17Q14061 63 aa11.26□□□□□ -0.61
PRKCB-209ENST00000498058 SPATA45Q537H7 98 aa11.26□□□□□ -0.61
PRKCB-209ENST00000498058 ERG28Q9UKR5 140 aa11.26□□□□□ -0.61
PRKCB-209ENST00000498058 PAM16Q9Y3D7 125 aa11.26□□□□□ -0.61
PRKCB-209ENST00000498058 MEIG1Q5JSS6 88 aa11.25□□□□□ -0.61
PRKCB-209ENST00000498058 NDUFC2-KCTD14E9PQ53 114 aa11.24□□□□□ -0.61
PRKCB-209ENST00000498058 IGLV7-43P04211 117 aa11.24□□□□□ -0.61
PRKCB-209ENST00000498058 TLX1NBP0CAT3 122 aa11.24□□□□□ -0.61
PRKCB-209ENST00000498058 PRR26Q8N8Z3 221 aa11.24□□□□□ -0.61
PRKCB-209ENST00000498058 PFN2P35080 140 aa11.22□□□□□ -0.61
PRKCB-209ENST00000498058 SCGB1D4Q6XE38 83 aa11.22□□□□□ -0.61
PRKCB-209ENST00000498058 LINC00158P58513 81 aa11.21□□□□□ -0.61
PRKCB-209ENST00000498058 FAM19A5Q7Z5A7 132 aaPredicted RBP11.21□□□□□ -0.61
PRKCB-209ENST00000498058 PCP2Q8IVA1 136 aa11.21□□□□□ -0.61
PRKCB-209ENST00000498058 A0A0J9YXY3 114 aa11.2□□□□□ -0.62
PRKCB-209ENST00000498058 COX8AP10176 69 aa11.2□□□□□ -0.62
PRKCB-209ENST00000498058 GAGE2EQ4V326 116 aa11.2□□□□□ -0.62
PRKCB-209ENST00000498058 TTTY13Q9BZ97 58 aa11.2□□□□□ -0.62
PRKCB-209ENST00000498058 GAGE2DQ9UEU5 116 aa11.2□□□□□ -0.62
PRKCB-209ENST00000498058 TIMM17BO60830 172 aa11.19□□□□□ -0.62
PRKCB-209ENST00000498058 H0Y9J4 135 aa11.18□□□□□ -0.62
PRKCB-209ENST00000498058 DLEU1O43261 78 aa11.18□□□□□ -0.62
PRKCB-209ENST00000498058 KRTAP1-4P0C5Y4 121 aa11.18□□□□□ -0.62
PRKCB-209ENST00000498058 SMIM13P0DJ93 91 aa11.18□□□□□ -0.62
PRKCB-209ENST00000498058 DIRC1Q969H9 104 aa11.18□□□□□ -0.62
PRKCB-209ENST00000498058 TMEM238C9JI98 176 aa11.17□□□□□ -0.62
PRKCB-209ENST00000498058 SLC25A34Q6PIV7 304 aa11.17□□□□□ -0.62
PRKCB-209ENST00000498058 BOD1L2Q8IYS8 172 aa11.17□□□□□ -0.62
PRKCB-209ENST00000498058 A0A0U1RRA0 63 aa11.16□□□□□ -0.62
PRKCB-209ENST00000498058 C9orf129Q5T035 196 aaKnown RBP11.16□□□□□ -0.62
PRKCB-209ENST00000498058 C14orf144Q96I85 54 aa11.16□□□□□ -0.62
PRKCB-209ENST00000498058 M0QXV9 152 aa11.14□□□□□ -0.63
PRKCB-209ENST00000498058 MIR7-3HGQ8N6C7 128 aa11.14□□□□□ -0.63
PRKCB-209ENST00000498058 COPS9Q8WXC6 57 aa11.14□□□□□ -0.63
PRKCB-209ENST00000498058 MIEN1Q9BRT3 115 aa11.13□□□□□ -0.63
PRKCB-209ENST00000498058 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
PRKCB-209ENST00000498058 Q6ZVH6 145 aa11.12□□□□□ -0.63
PRKCB-209ENST00000498058 C12orf57Q99622 126 aa11.12□□□□□ -0.63
PRKCB-209ENST00000498058 XAGE1AQ9HD64 81 aa11.12□□□□□ -0.63
PRKCB-209ENST00000498058 LITAFQ99732 161 aa11.1□□□□□ -0.63
PRKCB-209ENST00000498058 SPANXDQ9BXN6 97 aa11.1□□□□□ -0.63
PRKCB-209ENST00000498058 SPANXCQ9NY87 97 aa11.1□□□□□ -0.63
PRKCB-209ENST00000498058 UQCR10Q9UDW1 63 aa11.1□□□□□ -0.63
PRKCB-209ENST00000498058 UBE2BP63146 152 aa11.09□□□□□ -0.63
PRKCB-209ENST00000498058 ADAMTSL4-AS1Q5T5F5 129 aa11.09□□□□□ -0.63
PRKCB-209ENST00000498058 DAND5Q8N907 189 aa11.09□□□□□ -0.63
PRKCB-209ENST00000498058 IGLV1-50A0A075B6I6 118 aa11.08□□□□□ -0.64
PRKCB-209ENST00000498058 IFITM1P13164 125 aa11.08□□□□□ -0.64
PRKCB-209ENST00000498058 RPL24P83731 157 aaKnown RBP11.08□□□□□ -0.64
PRKCB-209ENST00000498058 SPANXB1Q9NS25 103 aaPredicted RBP11.08□□□□□ -0.64
PRKCB-209ENST00000498058 HIGD1BQ9P298 99 aa11.08□□□□□ -0.64
PRKCB-209ENST00000498058 LOC107984156A0A0G2JMH3 177 aa11.07□□□□□ -0.64
PRKCB-209ENST00000498058 ARL17AQ8IVW1 177 aa11.07□□□□□ -0.64
PRKCB-209ENST00000498058 LINC00518Q8N0U6 118 aa11.07□□□□□ -0.64
PRKCB-209ENST00000498058 LINC00308Q8TCZ7 52 aa11.06□□□□□ -0.64
PRKCB-209ENST00000498058 TSTD3H0UI37 97 aa11.05□□□□□ -0.64
PRKCB-209ENST00000498058 HIST1H4GQ99525 98 aa11.05□□□□□ -0.64
PRKCB-209ENST00000498058 PPDPFQ9H3Y8 114 aa11.05□□□□□ -0.64
PRKCB-209ENST00000498058 NKAPP1Q8N9T2 125 aa11.04□□□□□ -0.64
PRKCB-209ENST00000498058 TP73-AS1Q9UF72 201 aa11.04□□□□□ -0.64
PRKCB-209ENST00000498058 NPC2P61916 151 aa11.03□□□□□ -0.64
PRKCB-209ENST00000498058 PRO1933Q9H354 126 aa11.03□□□□□ -0.64
PRKCB-209ENST00000498058 C22orf24Q9Y442 160 aa11.03□□□□□ -0.64
PRKCB-209ENST00000498058 C2orf91Q6ZV80 131 aa11.02□□□□□ -0.65
PRKCB-209ENST00000498058 IGLV5-37A0A075B6J1 123 aa11.01□□□□□ -0.65
PRKCB-209ENST00000498058 ZNF861PO60384 105 aa11.01□□□□□ -0.65
PRKCB-209ENST00000498058 NDUFC2O95298 119 aa11.01□□□□□ -0.65
PRKCB-209ENST00000498058 TAL2Q16559 108 aa11.01□□□□□ -0.65
PRKCB-209ENST00000498058 LBHQ53QV2 105 aaPredicted RBP11.01□□□□□ -0.65
PRKCB-209ENST00000498058 MUSTN1Q8IVN3 82 aa11□□□□□ -0.65
PRKCB-209ENST00000498058 VPREB1P12018 145 aa10.99□□□□□ -0.65
PRKCB-209ENST00000498058 SOSTDC1Q6X4U4 206 aa10.99□□□□□ -0.65
PRKCB-209ENST00000498058 PRR4Q16378 134 aa10.98□□□□□ -0.65
PRKCB-209ENST00000498058 MUC2Q02817 5179 aa10.97□□□□□ -0.65
PRKCB-209ENST00000498058 TRBV10-2A0A0K0K1G8 114 aa10.97□□□□□ -0.65
PRKCB-209ENST00000498058 M0R378 163 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms