RNA–Protein interactions for RNA: ENST00000498038.1

HLA-DPB1-217, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-217ENST00000498038 M0QXV9 152 aa12.29□□□□□ -0.44
HLA-DPB1-217ENST00000498038 JOSD1Q15040 202 aaPredicted RBP12.29□□□□□ -0.44
HLA-DPB1-217ENST00000498038 DAND5Q8N907 189 aa12.28□□□□□ -0.44
HLA-DPB1-217ENST00000498038 PLA2G2DQ9UNK4 145 aa12.28□□□□□ -0.44
HLA-DPB1-217ENST00000498038 C22orf24Q9Y442 160 aa12.28□□□□□ -0.44
HLA-DPB1-217ENST00000498038 PLA2G1BP04054 148 aaKnown RBP12.27□□□□□ -0.45
HLA-DPB1-217ENST00000498038 RPL37AP61513 92 aaKnown RBP12.27□□□□□ -0.45
HLA-DPB1-217ENST00000498038 PCP2Q8IVA1 136 aa12.27□□□□□ -0.45
HLA-DPB1-217ENST00000498038 RPL24P83731 157 aaKnown RBP12.25□□□□□ -0.45
HLA-DPB1-217ENST00000498038 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
HLA-DPB1-217ENST00000498038 ADAMTSL4-AS1Q5T5F5 129 aa12.24□□□□□ -0.45
HLA-DPB1-217ENST00000498038 SCGB1D4Q6XE38 83 aa12.24□□□□□ -0.45
HLA-DPB1-217ENST00000498038 NKAPP1Q8N9T2 125 aa12.24□□□□□ -0.45
HLA-DPB1-217ENST00000498038 KRTAP4-5Q9BYR2 181 aa12.24□□□□□ -0.45
HLA-DPB1-217ENST00000498038 UBE2BP63146 152 aa12.23□□□□□ -0.45
HLA-DPB1-217ENST00000498038 IGLV5-37A0A075B6J1 123 aa12.22□□□□□ -0.45
HLA-DPB1-217ENST00000498038 TIMM17BO60830 172 aa12.22□□□□□ -0.45
HLA-DPB1-217ENST00000498038 VPREB1P12018 145 aa12.22□□□□□ -0.45
HLA-DPB1-217ENST00000498038 MRPL55Q7Z7F7 128 aaKnown RBP12.22□□□□□ -0.45
HLA-DPB1-217ENST00000498038 BOD1L2Q8IYS8 172 aa12.22□□□□□ -0.45
HLA-DPB1-217ENST00000498038 TP73-AS1Q9UF72 201 aa12.22□□□□□ -0.45
HLA-DPB1-217ENST00000498038 NPC2P61916 151 aa12.21□□□□□ -0.45
HLA-DPB1-217ENST00000498038 Q8NDZ9 215 aa12.21□□□□□ -0.45
HLA-DPB1-217ENST00000498038 LITAFQ99732 161 aa12.21□□□□□ -0.45
HLA-DPB1-217ENST00000498038 GAGE10A6NGK3 116 aa12.2□□□□□ -0.46
HLA-DPB1-217ENST00000498038 PYY3Q5JQD4 70 aa12.2□□□□□ -0.46
HLA-DPB1-217ENST00000498038 LINC00167Q96N53 147 aa12.2□□□□□ -0.46
HLA-DPB1-217ENST00000498038 MIEN1Q9BRT3 115 aa12.2□□□□□ -0.46
HLA-DPB1-217ENST00000498038 VAMP8Q9BV40 100 aa12.2□□□□□ -0.46
HLA-DPB1-217ENST00000498038 PAM16Q9Y3D7 125 aa12.2□□□□□ -0.46
HLA-DPB1-217ENST00000498038 KRTAP11-1Q8IUC1 163 aa12.19□□□□□ -0.46
HLA-DPB1-217ENST00000498038 LOC107984156A0A0G2JMH3 177 aa12.18□□□□□ -0.46
HLA-DPB1-217ENST00000498038 KRTAP10-4P60372 401 aaPredicted RBP12.18□□□□□ -0.46
HLA-DPB1-217ENST00000498038 PRR3P79522 188 aaKnown RBP12.18□□□□□ -0.46
HLA-DPB1-217ENST00000498038 SPATA45Q537H7 98 aa12.18□□□□□ -0.46
HLA-DPB1-217ENST00000498038 ARL17AQ8IVW1 177 aa12.18□□□□□ -0.46
HLA-DPB1-217ENST00000498038 PSORS1C2Q9UIG4 136 aa12.18□□□□□ -0.46
HLA-DPB1-217ENST00000498038 RPL37AP8A6NKH3 93 aa12.17□□□□□ -0.46
HLA-DPB1-217ENST00000498038 TMEM238C9JI98 176 aa12.17□□□□□ -0.46
HLA-DPB1-217ENST00000498038 SOSTDC1Q6X4U4 206 aa12.16□□□□□ -0.46
HLA-DPB1-217ENST00000498038 FAT1Q14517 4588 aa12.15□□□□□ -0.46
HLA-DPB1-217ENST00000498038 NCR3O14931 201 aa12.15□□□□□ -0.46
HLA-DPB1-217ENST00000498038 EIF4EBP3O60516 100 aaPredicted RBP12.15□□□□□ -0.46
HLA-DPB1-217ENST00000498038 COX8AP10176 69 aa12.15□□□□□ -0.46
HLA-DPB1-217ENST00000498038 LINC00308Q8TCZ7 52 aa12.15□□□□□ -0.46
HLA-DPB1-217ENST00000498038 M0R378 163 aa12.14□□□□□ -0.47
HLA-DPB1-217ENST00000498038 C1orf137Q5JT78 98 aa12.14□□□□□ -0.47
HLA-DPB1-217ENST00000498038 SPANXDQ9BXN6 97 aa12.14□□□□□ -0.47
HLA-DPB1-217ENST00000498038 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
HLA-DPB1-217ENST00000498038 C14orf144Q96I85 54 aa12.13□□□□□ -0.47
HLA-DPB1-217ENST00000498038 IGKV2-28A0A075B6P5 120 aa12.12□□□□□ -0.47
HLA-DPB1-217ENST00000498038 IGKV2D-28P01615 120 aa12.12□□□□□ -0.47
HLA-DPB1-217ENST00000498038 INAFM2P0DMQ5 153 aa12.12□□□□□ -0.47
HLA-DPB1-217ENST00000498038 IGLV1-50A0A075B6I6 118 aa12.11□□□□□ -0.47
HLA-DPB1-217ENST00000498038 NDUFC2O95298 119 aa12.11□□□□□ -0.47
HLA-DPB1-217ENST00000498038 VPS13BQ7Z7G8 4022 aa12.11□□□□□ -0.47
HLA-DPB1-217ENST00000498038 Q6ZVH6 145 aa12.1□□□□□ -0.47
HLA-DPB1-217ENST00000498038 DLEU1O43261 78 aa12.09□□□□□ -0.47
HLA-DPB1-217ENST00000498038 IFITM1P13164 125 aa12.09□□□□□ -0.47
HLA-DPB1-217ENST00000498038 HNRNPA3P51991 378 aaKnown RBP12.09□□□□□ -0.47
HLA-DPB1-217ENST00000498038 SRSF9Q13242 221 aaKnown RBP eCLIP12.09□□□□□ -0.47
HLA-DPB1-217ENST00000498038 COPS9Q8WXC6 57 aa12.09□□□□□ -0.47
HLA-DPB1-217ENST00000498038 SPANXB1Q9NS25 103 aaPredicted RBP12.09□□□□□ -0.47
HLA-DPB1-217ENST00000498038 MUSTN1Q8IVN3 82 aa12.08□□□□□ -0.48
HLA-DPB1-217ENST00000498038 TRBV10-2A0A0K0K1G8 114 aa12.07□□□□□ -0.48
HLA-DPB1-217ENST00000498038 SLC25A34Q6PIV7 304 aa12.07□□□□□ -0.48
HLA-DPB1-217ENST00000498038 IGLV7-43P04211 117 aa12.06□□□□□ -0.48
HLA-DPB1-217ENST00000498038 S100A12P80511 92 aa12.06□□□□□ -0.48
HLA-DPB1-217ENST00000498038 SRRM2Q9UQ35 2752 aaKnown RBP12.05□□□□□ -0.48
HLA-DPB1-217ENST00000498038 TRBV10-3A0A0K0K1G6 114 aa12.04□□□□□ -0.48
HLA-DPB1-217ENST00000498038 S100A7L2Q5SY68 101 aa12.04□□□□□ -0.48
HLA-DPB1-217ENST00000498038 REG3GQ6UW15 175 aa12.04□□□□□ -0.48
HLA-DPB1-217ENST00000498038 BCE1O60756 84 aa12.03□□□□□ -0.48
HLA-DPB1-217ENST00000498038 DDTP30046 118 aa12.03□□□□□ -0.48
HLA-DPB1-217ENST00000498038 TMEM126AQ9H061 195 aa12.03□□□□□ -0.48
HLA-DPB1-217ENST00000498038 LOC105371267A0A1B0GV96 52 aa12.02□□□□□ -0.49
HLA-DPB1-217ENST00000498038 HIST1H4GQ99525 98 aa12.02□□□□□ -0.49
HLA-DPB1-217ENST00000498038 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.49
HLA-DPB1-217ENST00000498038 SPINK6Q6UWN8 80 aa12.01□□□□□ -0.49
HLA-DPB1-217ENST00000498038 LINC00518Q8N0U6 118 aa12.01□□□□□ -0.49
HLA-DPB1-217ENST00000498038 OR13C6PQ8NH95 151 aa12.01□□□□□ -0.49
HLA-DPB1-217ENST00000498038 KCNQ1DNQ9H478 68 aa12□□□□□ -0.49
HLA-DPB1-217ENST00000498038 HIGD1BQ9P298 99 aa12□□□□□ -0.49
HLA-DPB1-217ENST00000498038 PRYO14603 147 aa11.99□□□□□ -0.49
HLA-DPB1-217ENST00000498038 IGLV6-57P01721 117 aa11.99□□□□□ -0.49
HLA-DPB1-217ENST00000498038 UBE2AP49459 152 aa11.98□□□□□ -0.49
HLA-DPB1-217ENST00000498038 C2orf91Q6ZV80 131 aa11.98□□□□□ -0.49
HLA-DPB1-217ENST00000498038 FAM19A1Q7Z5A9 133 aa11.98□□□□□ -0.49
HLA-DPB1-217ENST00000498038 ZNF861PO60384 105 aa11.97□□□□□ -0.49
HLA-DPB1-217ENST00000498038 SMIM6P0DI80 62 aa11.97□□□□□ -0.49
HLA-DPB1-217ENST00000498038 ABCA13Q86UQ4 5058 aa11.97□□□□□ -0.49
HLA-DPB1-217ENST00000498038 RPL28P46779 137 aaKnown RBP11.96□□□□□ -0.49
HLA-DPB1-217ENST00000498038 LINC00337Q8N6G1 96 aa11.96□□□□□ -0.49
HLA-DPB1-217ENST00000498038 DIRC1Q969H9 104 aa11.95□□□□□ -0.5
HLA-DPB1-217ENST00000498038 TRAV23DV6A0A075B6W5 121 aa11.94□□□□□ -0.5
HLA-DPB1-217ENST00000498038 A4D1N5 150 aa11.94□□□□□ -0.5
HLA-DPB1-217ENST00000498038 A6NDN8 102 aa11.93□□□□□ -0.5
HLA-DPB1-217ENST00000498038 SPRR1AP35321 89 aa11.93□□□□□ -0.5
HLA-DPB1-217ENST00000498038 PRLHP81277 87 aa11.93□□□□□ -0.5
HLA-DPB1-217ENST00000498038 UQCR10Q9UDW1 63 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms