RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 M0QXV9 152 aa7.11□□□□□ -1.27
HLA-B-254ENST00000497377 OXTP01178 125 aa7.11□□□□□ -1.27
HLA-B-254ENST00000497377 HNRNPA3P51991 378 aaKnown RBP7.11□□□□□ -1.27
HLA-B-254ENST00000497377 XAGE1AQ9HD64 81 aa7.11□□□□□ -1.27
HLA-B-254ENST00000497377 DPM2O94777 84 aa7.1□□□□□ -1.27
HLA-B-254ENST00000497377 COA6Q5JTJ3 125 aaKnown RBP7.1□□□□□ -1.27
HLA-B-254ENST00000497377 KRTAP7-1Q8IUC3 87 aa7.1□□□□□ -1.27
HLA-B-254ENST00000497377 ZNF625Q96I27 306 aaPredicted RBP7.1□□□□□ -1.27
HLA-B-254ENST00000497377 TP73-AS1Q9UF72 201 aa7.1□□□□□ -1.27
HLA-B-254ENST00000497377 ERG28Q9UKR5 140 aa7.1□□□□□ -1.27
HLA-B-254ENST00000497377 PLA2G2DQ9UNK4 145 aa7.1□□□□□ -1.27
HLA-B-254ENST00000497377 MYCBP2O75592 4640 aa7.1□□□□□ -1.27
HLA-B-254ENST00000497377 PKHD1L1Q86WI1 4243 aa7.09□□□□□ -1.27
HLA-B-254ENST00000497377 DMBT1Q9UGM3 2413 aaPredicted RBP7.09□□□□□ -1.27
HLA-B-254ENST00000497377 ATP6V1G1O75348 118 aa7.09□□□□□ -1.27
HLA-B-254ENST00000497377 LBHQ53QV2 105 aaPredicted RBP7.09□□□□□ -1.27
HLA-B-254ENST00000497377 PSORS1C2Q9UIG4 136 aa7.09□□□□□ -1.27
HLA-B-254ENST00000497377 IGKCP01834 107 aa7.08□□□□□ -1.28
HLA-B-254ENST00000497377 PFN2P35080 140 aa7.08□□□□□ -1.28
HLA-B-254ENST00000497377 HERVK_113P61574 105 aa7.08□□□□□ -1.28
HLA-B-254ENST00000497377 HERV-K104P63124 156 aa7.08□□□□□ -1.28
HLA-B-254ENST00000497377 UBE2BP63146 152 aa7.08□□□□□ -1.28
HLA-B-254ENST00000497377 SPINK6Q6UWN8 80 aa7.08□□□□□ -1.28
HLA-B-254ENST00000497377 LINC00587B1AMM8 73 aa7.07□□□□□ -1.28
HLA-B-254ENST00000497377 SERTAD4-AS1Q5TG53 156 aa7.07□□□□□ -1.28
HLA-B-254ENST00000497377 PLEKHB2Q96CS7 222 aa7.07□□□□□ -1.28
HLA-B-254ENST00000497377 C22orf24Q9Y442 160 aa7.07□□□□□ -1.28
HLA-B-254ENST00000497377 IGLV5-37A0A075B6J1 123 aa7.06□□□□□ -1.28
HLA-B-254ENST00000497377 SYS1-DBNDD2H3BUS1 97 aa7.06□□□□□ -1.28
HLA-B-254ENST00000497377 LEPROTO15243 131 aa7.06□□□□□ -1.28
HLA-B-254ENST00000497377 SRSF9Q13242 221 aaKnown RBP eCLIP7.06□□□□□ -1.28
HLA-B-254ENST00000497377 C1orf137Q5JT78 98 aa7.06□□□□□ -1.28
HLA-B-254ENST00000497377 MRPL55Q7Z7F7 128 aaKnown RBP7.06□□□□□ -1.28
HLA-B-254ENST00000497377 MYMXA0A1B0GTQ4 84 aa7.05□□□□□ -1.28
HLA-B-254ENST00000497377 LINC00158P58513 81 aa7.05□□□□□ -1.28
HLA-B-254ENST00000497377 PET117Q6UWS5 81 aa7.05□□□□□ -1.28
HLA-B-254ENST00000497377 SND1-IT1Q9HBX3 110 aa7.05□□□□□ -1.28
HLA-B-254ENST00000497377 NDUFA12Q9UI09 145 aa7.05□□□□□ -1.28
HLA-B-254ENST00000497377 RPL24P83731 157 aaKnown RBP7.04□□□□□ -1.28
HLA-B-254ENST00000497377 REG3GQ6UW15 175 aa7.04□□□□□ -1.28
HLA-B-254ENST00000497377 NKAPP1Q8N9T2 125 aa7.04□□□□□ -1.28
HLA-B-254ENST00000497377 PMCHL2Q9BQD1 86 aa7.04□□□□□ -1.28
HLA-B-254ENST00000497377 J3QQQ9 107 aa7.03□□□□□ -1.28
HLA-B-254ENST00000497377 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
HLA-B-254ENST00000497377 NMUP48645 174 aa7.03□□□□□ -1.28
HLA-B-254ENST00000497377 LINC01545Q5VT33 79 aa7.03□□□□□ -1.28
HLA-B-254ENST00000497377 KRTAP11-1Q8IUC1 163 aa7.03□□□□□ -1.28
HLA-B-254ENST00000497377 LGALS3P17931 250 aaKnown RBP7.02□□□□□ -1.29
HLA-B-254ENST00000497377 MEIG1Q5JSS6 88 aa7.02□□□□□ -1.29
HLA-B-254ENST00000497377 E9PLD3 99 aa7.01□□□□□ -1.29
HLA-B-254ENST00000497377 C3orf79P0CE67 100 aa7.01□□□□□ -1.29
HLA-B-254ENST00000497377 VPREB1P12018 145 aa7.01□□□□□ -1.29
HLA-B-254ENST00000497377 TSPEAR-AS2P59090 65 aa7.01□□□□□ -1.29
HLA-B-254ENST00000497377 DIRC1Q969H9 104 aa7.01□□□□□ -1.29
HLA-B-254ENST00000497377 LINC00167Q96N53 147 aa7.01□□□□□ -1.29
HLA-B-254ENST00000497377 C20orf202A1L168 122 aa7□□□□□ -1.29
HLA-B-254ENST00000497377 SMIM13P0DJ93 91 aa7□□□□□ -1.29
HLA-B-254ENST00000497377 AKR1D1P51857 326 aa7□□□□□ -1.29
HLA-B-254ENST00000497377 LINC01600Q96MT4 127 aa7□□□□□ -1.29
HLA-B-254ENST00000497377 A0A0U1RRA0 63 aa6.99□□□□□ -1.29
HLA-B-254ENST00000497377 KRTDAPP60985 99 aa6.99□□□□□ -1.29
HLA-B-254ENST00000497377 MIR7-3HGQ8N6C7 128 aa6.99□□□□□ -1.29
HLA-B-254ENST00000497377 LRP1Q07954 4544 aaKnown RBP6.99□□□□□ -1.29
HLA-B-254ENST00000497377 GAGE10A6NGK3 116 aa6.98□□□□□ -1.29
HLA-B-254ENST00000497377 RPL37AP8A6NKH3 93 aa6.98□□□□□ -1.29
HLA-B-254ENST00000497377 BCE1O60756 84 aa6.98□□□□□ -1.29
HLA-B-254ENST00000497377 FAT3Q8TDW7 4589 aa6.98□□□□□ -1.29
HLA-B-254ENST00000497377 H0Y9J4 135 aa6.97□□□□□ -1.29
HLA-B-254ENST00000497377 ZNF861PO60384 105 aa6.97□□□□□ -1.29
HLA-B-254ENST00000497377 IGLV1-50A0A075B6I6 118 aa6.96□□□□□ -1.3
HLA-B-254ENST00000497377 LOC107984156A0A0G2JMH3 177 aa6.96□□□□□ -1.3
HLA-B-254ENST00000497377 M0R378 163 aa6.96□□□□□ -1.3
HLA-B-254ENST00000497377 S100A6P06703 90 aa6.96□□□□□ -1.3
HLA-B-254ENST00000497377 MT1HL1P0DM35 61 aa6.96□□□□□ -1.3
HLA-B-254ENST00000497377 S100A2P29034 98 aa6.96□□□□□ -1.3
HLA-B-254ENST00000497377 RPL28P46779 137 aaKnown RBP6.96□□□□□ -1.3
HLA-B-254ENST00000497377 ARL17AQ8IVW1 177 aa6.96□□□□□ -1.3
HLA-B-254ENST00000497377 BOD1L2Q8IYS8 172 aa6.96□□□□□ -1.3
HLA-B-254ENST00000497377 IGKV2D-26A0A0A0MRZ7 120 aa6.95□□□□□ -1.3
HLA-B-254ENST00000497377 HIST3H2BBQ8N257 126 aa6.95□□□□□ -1.3
HLA-B-254ENST00000497377 Q8NDZ9 215 aa6.95□□□□□ -1.3
HLA-B-254ENST00000497377 MIEN1Q9BRT3 115 aa6.95□□□□□ -1.3
HLA-B-254ENST00000497377 IGKV2-28A0A075B6P5 120 aa6.94□□□□□ -1.3
HLA-B-254ENST00000497377 A0A0J9YXY3 114 aa6.94□□□□□ -1.3
HLA-B-254ENST00000497377 IGKV2D-28P01615 120 aa6.94□□□□□ -1.3
HLA-B-254ENST00000497377 HERC1Q15751 4861 aa6.94□□□□□ -1.3
HLA-B-254ENST00000497377 TIMM17BO60830 172 aa6.93□□□□□ -1.3
HLA-B-254ENST00000497377 HIST1H2BLQ99880 126 aa6.93□□□□□ -1.3
HLA-B-254ENST00000497377 ZNF815PA8K554 130 aa6.92□□□□□ -1.3
HLA-B-254ENST00000497377 UBE2AP49459 152 aa6.92□□□□□ -1.3
HLA-B-254ENST00000497377 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
HLA-B-254ENST00000497377 SNRPEP62304 92 aaKnown RBP6.92□□□□□ -1.3
HLA-B-254ENST00000497377 DAND5Q8N907 189 aa6.92□□□□□ -1.3
HLA-B-254ENST00000497377 TMEM126AQ9H061 195 aa6.92□□□□□ -1.3
HLA-B-254ENST00000497377 TRBV10-2A0A0K0K1G8 114 aa6.91□□□□□ -1.3
HLA-B-254ENST00000497377 NDUFC2O95298 119 aa6.91□□□□□ -1.3
HLA-B-254ENST00000497377 S100A12P80511 92 aa6.91□□□□□ -1.3
HLA-B-254ENST00000497377 KRTAP13-1Q8IUC0 172 aa6.91□□□□□ -1.3
HLA-B-254ENST00000497377 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
HLA-B-254ENST00000497377 PRYO14603 147 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms