RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 C11orf86A6NJI1 115 aa8.96□□□□□ -0.98
CXCL12-208ENST00000496375 F8VRH5 84 aa8.96□□□□□ -0.98
CXCL12-208ENST00000496375 PTTG1IPP53801 180 aa8.96□□□□□ -0.98
CXCL12-208ENST00000496375 BATFQ16520 125 aa8.96□□□□□ -0.98
CXCL12-208ENST00000496375 LINC01600Q96MT4 127 aa8.96□□□□□ -0.98
CXCL12-208ENST00000496375 CHTOPQ9Y3Y2 248 aaKnown RBP8.96□□□□□ -0.98
CXCL12-208ENST00000496375 PRSS2P07478 247 aa8.95□□□□□ -0.98
CXCL12-208ENST00000496375 ANKRD39Q53RE8 183 aa8.95□□□□□ -0.98
CXCL12-208ENST00000496375 C2orf82Q6UX34 121 aa8.95□□□□□ -0.98
CXCL12-208ENST00000496375 BOD1L2Q8IYS8 172 aa8.95□□□□□ -0.98
CXCL12-208ENST00000496375 SPINK8P0C7L1 97 aa8.94□□□□□ -0.98
CXCL12-208ENST00000496375 HINT1P49773 126 aaPredicted RBP8.94□□□□□ -0.98
CXCL12-208ENST00000496375 COX7B2Q8TF08 81 aa8.94□□□□□ -0.98
CXCL12-208ENST00000496375 C6orf226Q5I0X4 101 aa8.93□□□□□ -0.98
CXCL12-208ENST00000496375 TOMM7Q9P0U1 55 aa8.93□□□□□ -0.98
CXCL12-208ENST00000496375 CKS1BP61024 79 aa8.92□□□□□ -0.98
CXCL12-208ENST00000496375 SPINK6Q6UWN8 80 aa8.92□□□□□ -0.98
CXCL12-208ENST00000496375 NDUFC2-KCTD14E9PQ53 114 aa8.91□□□□□ -0.98
CXCL12-208ENST00000496375 GAGE2BQ13066 116 aa8.91□□□□□ -0.98
CXCL12-208ENST00000496375 Q6ZRP5 223 aa8.91□□□□□ -0.98
CXCL12-208ENST00000496375 HIGD1BQ9P298 99 aa8.91□□□□□ -0.98
CXCL12-208ENST00000496375 TMEM223A0PJW6 202 aa8.9□□□□□ -0.98
CXCL12-208ENST00000496375 NMUP48645 174 aa8.9□□□□□ -0.98
CXCL12-208ENST00000496375 BVES-AS1Q5T3Y7 98 aa8.9□□□□□ -0.98
CXCL12-208ENST00000496375 TMEM170BQ5T4T1 132 aa8.9□□□□□ -0.98
CXCL12-208ENST00000496375 REG3GQ6UW15 175 aa8.9□□□□□ -0.98
CXCL12-208ENST00000496375 C2orf91Q6ZV80 131 aa8.9□□□□□ -0.98
CXCL12-208ENST00000496375 RPL18AQ02543 176 aaKnown RBP8.89□□□□□ -0.99
CXCL12-208ENST00000496375 HSD52Q0P140 79 aa8.89□□□□□ -0.99
CXCL12-208ENST00000496375 SRSF9Q13242 221 aaKnown RBP eCLIP8.89□□□□□ -0.99
CXCL12-208ENST00000496375 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
CXCL12-208ENST00000496375 C9orf116Q5BN46 136 aaPredicted RBP8.88□□□□□ -0.99
CXCL12-208ENST00000496375 SFTA2Q6UW10 78 aa8.88□□□□□ -0.99
CXCL12-208ENST00000496375 A0A1W2PNN7 141 aa8.87□□□□□ -0.99
CXCL12-208ENST00000496375 A6NDN8 102 aa8.86□□□□□ -0.99
CXCL12-208ENST00000496375 PCP2Q8IVA1 136 aa8.86□□□□□ -0.99
CXCL12-208ENST00000496375 ZNF625Q96I27 306 aaPredicted RBP8.86□□□□□ -0.99
CXCL12-208ENST00000496375 IGKV2D-26A0A0A0MRZ7 120 aa8.85□□□□□ -0.99
CXCL12-208ENST00000496375 HERVK_113P61574 105 aa8.85□□□□□ -0.99
CXCL12-208ENST00000496375 E9PLD3 99 aa8.84□□□□□ -0.99
CXCL12-208ENST00000496375 TAL2Q16559 108 aa8.84□□□□□ -0.99
CXCL12-208ENST00000496375 C9orf129Q5T035 196 aaKnown RBP8.84□□□□□ -0.99
CXCL12-208ENST00000496375 TP73-AS1Q9UF72 201 aa8.84□□□□□ -0.99
CXCL12-208ENST00000496375 GAGE2EQ4V326 116 aa8.83□□□□□ -1
CXCL12-208ENST00000496375 KRTAP7-1Q8IUC3 87 aa8.83□□□□□ -1
CXCL12-208ENST00000496375 GAGE2DQ9UEU5 116 aa8.83□□□□□ -1
CXCL12-208ENST00000496375 PSORS1C2Q9UIG4 136 aa8.83□□□□□ -1
CXCL12-208ENST00000496375 COX17Q14061 63 aa8.82□□□□□ -1
CXCL12-208ENST00000496375 PHF5AQ7RTV0 110 aaKnown RBP8.82□□□□□ -1
CXCL12-208ENST00000496375 MYMXA0A1B0GTQ4 84 aa8.81□□□□□ -1
CXCL12-208ENST00000496375 TAX1BP3O14907 124 aa8.81□□□□□ -1
CXCL12-208ENST00000496375 FAM168BA1KXE4 195 aa8.8□□□□□ -1
CXCL12-208ENST00000496375 C1orf137Q5JT78 98 aa8.8□□□□□ -1
CXCL12-208ENST00000496375 ERG28Q9UKR5 140 aa8.8□□□□□ -1
CXCL12-208ENST00000496375 LEPROTO15243 131 aa8.79□□□□□ -1
CXCL12-208ENST00000496375 HERV-K104P63124 156 aa8.79□□□□□ -1
CXCL12-208ENST00000496375 PLEKHB2Q96CS7 222 aa8.79□□□□□ -1
CXCL12-208ENST00000496375 TSPEAR-AS2P59090 65 aa8.78□□□□□ -1
CXCL12-208ENST00000496375 XAGE1AQ9HD64 81 aa8.78□□□□□ -1
CXCL12-208ENST00000496375 LPAP08519 4548 aa8.78□□□□□ -1
CXCL12-208ENST00000496375 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
CXCL12-208ENST00000496375 SMIM13P0DJ93 91 aa8.77□□□□□ -1.01
CXCL12-208ENST00000496375 UBE2V1Q13404 147 aa8.77□□□□□ -1.01
CXCL12-208ENST00000496375 CEND1Q8N111 149 aa8.77□□□□□ -1.01
CXCL12-208ENST00000496375 NDUFA12Q9UI09 145 aa8.77□□□□□ -1.01
CXCL12-208ENST00000496375 C9orf118A6NHY6 69 aa8.76□□□□□ -1.01
CXCL12-208ENST00000496375 J3QQQ9 107 aa8.76□□□□□ -1.01
CXCL12-208ENST00000496375 VAMP3Q15836 100 aa8.76□□□□□ -1.01
CXCL12-208ENST00000496375 FAM19A5Q7Z5A7 132 aaPredicted RBP8.76□□□□□ -1.01
CXCL12-208ENST00000496375 TTTY13Q9BZ97 58 aa8.76□□□□□ -1.01
CXCL12-208ENST00000496375 ZNF815PA8K554 130 aa8.75□□□□□ -1.01
CXCL12-208ENST00000496375 M0QXV9 152 aa8.75□□□□□ -1.01
CXCL12-208ENST00000496375 IGLV7-43P04211 117 aa8.75□□□□□ -1.01
CXCL12-208ENST00000496375 HIST1H4GQ99525 98 aa8.75□□□□□ -1.01
CXCL12-208ENST00000496375 PFN2P35080 140 aa8.74□□□□□ -1.01
CXCL12-208ENST00000496375 KRTAP11-1Q8IUC1 163 aa8.74□□□□□ -1.01
CXCL12-208ENST00000496375 SND1-IT1Q9HBX3 110 aa8.74□□□□□ -1.01
CXCL12-208ENST00000496375 LGALS3P17931 250 aaKnown RBP8.73□□□□□ -1.01
CXCL12-208ENST00000496375 SCGB1D4Q6XE38 83 aa8.73□□□□□ -1.01
CXCL12-208ENST00000496375 DIRC1Q969H9 104 aa8.73□□□□□ -1.01
CXCL12-208ENST00000496375 TMEM238LA0A1B0GVL6 79 aa8.72□□□□□ -1.01
CXCL12-208ENST00000496375 A6NJY4 79 aa8.72□□□□□ -1.01
CXCL12-208ENST00000496375 Q6ZVH6 145 aa8.72□□□□□ -1.01
CXCL12-208ENST00000496375 C22orf24Q9Y442 160 aa8.72□□□□□ -1.01
CXCL12-208ENST00000496375 FXYD2P54710 66 aa8.71□□□□□ -1.02
CXCL12-208ENST00000496375 GTF2H5Q6ZYL4 71 aa8.71□□□□□ -1.02
CXCL12-208ENST00000496375 PRR26Q8N8Z3 221 aa8.71□□□□□ -1.02
CXCL12-208ENST00000496375 SPANXB1Q9NS25 103 aaPredicted RBP8.71□□□□□ -1.02
CXCL12-208ENST00000496375 H0Y9J4 135 aa8.7□□□□□ -1.02
CXCL12-208ENST00000496375 VPREB1P12018 145 aa8.7□□□□□ -1.02
CXCL12-208ENST00000496375 LINC00158P58513 81 aa8.7□□□□□ -1.02
CXCL12-208ENST00000496375 MRPL55Q7Z7F7 128 aaKnown RBP8.7□□□□□ -1.02
CXCL12-208ENST00000496375 LOC107984156A0A0G2JMH3 177 aa8.69□□□□□ -1.02
CXCL12-208ENST00000496375 UBE2BP63146 152 aa8.69□□□□□ -1.02
CXCL12-208ENST00000496375 MEIG1Q5JSS6 88 aa8.69□□□□□ -1.02
CXCL12-208ENST00000496375 ARL17AQ8IVW1 177 aa8.69□□□□□ -1.02
CXCL12-208ENST00000496375 A0A1B0GWB2 263 aa8.68□□□□□ -1.02
CXCL12-208ENST00000496375 GAGE10A6NGK3 116 aa8.68□□□□□ -1.02
CXCL12-208ENST00000496375 H3BUT2 72 aa8.68□□□□□ -1.02
CXCL12-208ENST00000496375 MIR7-3HGQ8N6C7 128 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms