RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	JOSD1	Q15040	202 aa	Predicted RBP	7.68	□□□□□ -1.18
MRPL55-233	ENST00000495899	CHTOP	Q9Y3Y2	248 aa	Known RBP	7.68	□□□□□ -1.18
MRPL55-233	ENST00000495899	DMBT1	Q9UGM3	2413 aa	Predicted RBP	7.68	□□□□□ -1.18
MRPL55-233	ENST00000495899	KRTAP9-6	A0A140TA67	174 aa		7.67	□□□□□ -1.18
MRPL55-233	ENST00000495899	FAM168B	A1KXE4	195 aa		7.67	□□□□□ -1.18
MRPL55-233	ENST00000495899	C11orf86	A6NJI1	115 aa		7.67	□□□□□ -1.18
MRPL55-233	ENST00000495899	PYY3	Q5JQD4	70 aa		7.67	□□□□□ -1.18
MRPL55-233	ENST00000495899	C9orf129	Q5T035	196 aa	Known RBP	7.67	□□□□□ -1.18
MRPL55-233	ENST00000495899	TMEM170B	Q5T4T1	132 aa		7.66	□□□□□ -1.18
MRPL55-233	ENST00000495899	SFTA2	Q6UW10	78 aa		7.66	□□□□□ -1.18
MRPL55-233	ENST00000495899	PHF5A	Q7RTV0	110 aa	Known RBP	7.66	□□□□□ -1.18
MRPL55-233	ENST00000495899	C12orf57	Q99622	126 aa		7.66	□□□□□ -1.18
MRPL55-233	ENST00000495899	LEPROTL1	O95214	131 aa		7.65	□□□□□ -1.18
MRPL55-233	ENST00000495899	SPINK6	Q6UWN8	80 aa		7.65	□□□□□ -1.18
MRPL55-233	ENST00000495899	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	7.65	□□□□□ -1.18
MRPL55-233	ENST00000495899	KRTAP7-1	Q8IUC3	87 aa		7.65	□□□□□ -1.18
MRPL55-233	ENST00000495899	HSPB8	Q9UJY1	196 aa		7.65	□□□□□ -1.18
MRPL55-233	ENST00000495899	C3orf79	P0CE67	100 aa		7.64	□□□□□ -1.19
MRPL55-233	ENST00000495899	SRSF9	Q13242	221 aa	Known RBP eCLIP	7.64	□□□□□ -1.19
MRPL55-233	ENST00000495899	PSORS1C2	Q9UIG4	136 aa		7.64	□□□□□ -1.19
MRPL55-233	ENST00000495899		M0QXV9	152 aa		7.63	□□□□□ -1.19
MRPL55-233	ENST00000495899	KRTDAP	P60985	99 aa		7.63	□□□□□ -1.19
MRPL55-233	ENST00000495899	XAGE1A	Q9HD64	81 aa		7.63	□□□□□ -1.19
MRPL55-233	ENST00000495899	TMEM223	A0PJW6	202 aa		7.62	□□□□□ -1.19
MRPL55-233	ENST00000495899	COX17	Q14061	63 aa		7.62	□□□□□ -1.19
MRPL55-233	ENST00000495899	LBH	Q53QV2	105 aa	Predicted RBP	7.62	□□□□□ -1.19
MRPL55-233	ENST00000495899	MAP1LC3C	Q9BXW4	147 aa		7.62	□□□□□ -1.19
MRPL55-233	ENST00000495899	HERC1	Q15751	4861 aa		7.61	□□□□□ -1.19
MRPL55-233	ENST00000495899	C1orf137	Q5JT78	98 aa		7.61	□□□□□ -1.19
MRPL55-233	ENST00000495899	TP73-AS1	Q9UF72	201 aa		7.61	□□□□□ -1.19
MRPL55-233	ENST00000495899	C22orf24	Q9Y442	160 aa		7.61	□□□□□ -1.19
MRPL55-233	ENST00000495899	SYS1-DBNDD2	H3BUS1	97 aa		7.6	□□□□□ -1.19
MRPL55-233	ENST00000495899	PLN	P26678	52 aa		7.6	□□□□□ -1.19
MRPL55-233	ENST00000495899	UBE2B	P63146	152 aa		7.6	□□□□□ -1.19
MRPL55-233	ENST00000495899	ZNF625	Q96I27	306 aa	Predicted RBP	7.6	□□□□□ -1.19
MRPL55-233	ENST00000495899	ERG28	Q9UKR5	140 aa		7.6	□□□□□ -1.19
MRPL55-233	ENST00000495899	PFN2	P35080	140 aa		7.59	□□□□□ -1.19
MRPL55-233	ENST00000495899	S100A12	P80511	92 aa		7.59	□□□□□ -1.19
MRPL55-233	ENST00000495899	REG3G	Q6UW15	175 aa		7.59	□□□□□ -1.19
MRPL55-233	ENST00000495899	KRTAP11-1	Q8IUC1	163 aa		7.59	□□□□□ -1.19
MRPL55-233	ENST00000495899		H0Y8G0	127 aa		7.58	□□□□□ -1.2
MRPL55-233	ENST00000495899	PRY	O14603	147 aa		7.58	□□□□□ -1.2
MRPL55-233	ENST00000495899	IGLV7-43	P04211	117 aa		7.58	□□□□□ -1.2
MRPL55-233	ENST00000495899	LINC01600	Q96MT4	127 aa		7.58	□□□□□ -1.2
MRPL55-233	ENST00000495899	IGLV5-37	A0A075B6J1	123 aa		7.57	□□□□□ -1.2
MRPL55-233	ENST00000495899	C20orf202	A1L168	122 aa		7.57	□□□□□ -1.2
MRPL55-233	ENST00000495899	LCE3B	Q5TA77	95 aa		7.57	□□□□□ -1.2
MRPL55-233	ENST00000495899	MRPL55	Q7Z7F7	128 aa	Known RBP	7.57	□□□□□ -1.2
MRPL55-233	ENST00000495899	LRP1	Q07954	4544 aa	Known RBP	7.57	□□□□□ -1.2
MRPL55-233	ENST00000495899	PKHD1L1	Q86WI1	4243 aa		7.56	□□□□□ -1.2
MRPL55-233	ENST00000495899	DPM2	O94777	84 aa		7.56	□□□□□ -1.2
MRPL55-233	ENST00000495899	HERV-K104	P63124	156 aa		7.56	□□□□□ -1.2
MRPL55-233	ENST00000495899	SND1-IT1	Q9HBX3	110 aa		7.56	□□□□□ -1.2
MRPL55-233	ENST00000495899	LINC00587	B1AMM8	73 aa		7.55	□□□□□ -1.2
MRPL55-233	ENST00000495899	MT1HL1	P0DM35	61 aa		7.55	□□□□□ -1.2
MRPL55-233	ENST00000495899	LINC01545	Q5VT33	79 aa		7.55	□□□□□ -1.2
MRPL55-233	ENST00000495899	DIRC1	Q969H9	104 aa		7.55	□□□□□ -1.2
MRPL55-233	ENST00000495899	KRTAP23-1	A1A580	65 aa		7.54	□□□□□ -1.2
MRPL55-233	ENST00000495899	IGKC	P01834	107 aa		7.54	□□□□□ -1.2
MRPL55-233	ENST00000495899	VPREB1	P12018	145 aa		7.54	□□□□□ -1.2
MRPL55-233	ENST00000495899	LINC00158	P58513	81 aa		7.54	□□□□□ -1.2
MRPL55-233	ENST00000495899	RPL24	P83731	157 aa	Known RBP	7.54	□□□□□ -1.2
MRPL55-233	ENST00000495899	NKAPP1	Q8N9T2	125 aa		7.54	□□□□□ -1.2
MRPL55-233	ENST00000495899	LINC00167	Q96N53	147 aa		7.54	□□□□□ -1.2
MRPL55-233	ENST00000495899	MYMX	A0A1B0GTQ4	84 aa		7.53	□□□□□ -1.2
MRPL55-233	ENST00000495899	LEPROT	O15243	131 aa		7.53	□□□□□ -1.2
MRPL55-233	ENST00000495899	HERVK_113	P61574	105 aa		7.53	□□□□□ -1.2
MRPL55-233	ENST00000495899	PLEKHB2	Q96CS7	222 aa		7.53	□□□□□ -1.2
MRPL55-233	ENST00000495899	VAMP8	Q9BV40	100 aa		7.53	□□□□□ -1.2
MRPL55-233	ENST00000495899	NDUFA12	Q9UI09	145 aa		7.53	□□□□□ -1.2
MRPL55-233	ENST00000495899	FAT3	Q8TDW7	4589 aa		7.52	□□□□□ -1.2
MRPL55-233	ENST00000495899	PMCHL2	Q9BQD1	86 aa		7.52	□□□□□ -1.21
MRPL55-233	ENST00000495899		H0Y9J4	135 aa		7.51	□□□□□ -1.21
MRPL55-233	ENST00000495899	ZNF861P	O60384	105 aa		7.51	□□□□□ -1.21
MRPL55-233	ENST00000495899	RPL37AP8	A6NKH3	93 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899	PCP4L1	A6NKN8	68 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899	TSTD3	H0UI37	97 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899		J3QQQ9	107 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899	BCE1	O60756	84 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899	SMIM13	P0DJ93	91 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899	NMU	P48645	174 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899	KRTAP10-8	P60410	259 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899	MEIG1	Q5JSS6	88 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899	ATOH7	Q8N100	152 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899	KRTAP3-1	Q9BYR8	98 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899	PAM16	Q9Y3D7	125 aa		7.5	□□□□□ -1.21
MRPL55-233	ENST00000495899		A0A0A0MQY5	61 aa		7.49	□□□□□ -1.21
MRPL55-233	ENST00000495899	HSBP1L1	C9JCN9	74 aa		7.49	□□□□□ -1.21
MRPL55-233	ENST00000495899	TSPEAR-AS2	P59090	65 aa		7.49	□□□□□ -1.21
MRPL55-233	ENST00000495899	SPATA45	Q537H7	98 aa		7.49	□□□□□ -1.21
MRPL55-233	ENST00000495899	PRO1933	Q9H354	126 aa		7.49	□□□□□ -1.21
MRPL55-233	ENST00000495899	IGLV1-50	A0A075B6I6	118 aa		7.48	□□□□□ -1.21
MRPL55-233	ENST00000495899		A0A0U1RRA0	63 aa		7.48	□□□□□ -1.21
MRPL55-233	ENST00000495899	LGALS3	P17931	250 aa	Known RBP	7.48	□□□□□ -1.21
MRPL55-233	ENST00000495899	RPL28	P46779	137 aa	Known RBP	7.48	□□□□□ -1.21
MRPL55-233	ENST00000495899		E9PLD3	99 aa		7.47	□□□□□ -1.21
MRPL55-233	ENST00000495899	MIR7-3HG	Q8N6C7	128 aa		7.47	□□□□□ -1.21
MRPL55-233	ENST00000495899		Q8NDZ9	215 aa		7.46	□□□□□ -1.22
MRPL55-233	ENST00000495899	IGKV2-28	A0A075B6P5	120 aa		7.45	□□□□□ -1.22
MRPL55-233	ENST00000495899	LOC107984156	A0A0G2JMH3	177 aa		7.45	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms