RNA–Protein interactions for RNA: ENST00000494559.5

PDZRN3-211, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-211ENST00000494559 C15orf56Q8N910 161 aa10.32□□□□□ -0.76
PDZRN3-211ENST00000494559 Q9HAA7 133 aa10.32□□□□□ -0.76
PDZRN3-211ENST00000494559 HIGD2BQ4VC39 106 aa10.32□□□□□ -0.76
PDZRN3-211ENST00000494559 C1orf43Q9BWL3 253 aa10.31□□□□□ -0.76
PDZRN3-211ENST00000494559 TMEM126AQ9H061 195 aa10.31□□□□□ -0.76
PDZRN3-211ENST00000494559 ZNF561-AS1K7EIQ3 104 aa10.3□□□□□ -0.76
PDZRN3-211ENST00000494559 NCR3O14931 201 aa10.3□□□□□ -0.76
PDZRN3-211ENST00000494559 LINC00588Q9Y4M8 146 aa10.29□□□□□ -0.76
PDZRN3-211ENST00000494559 XGP55808 180 aa10.29□□□□□ -0.76
PDZRN3-211ENST00000494559 CAMK2N2Q96S95 79 aa10.29□□□□□ -0.76
PDZRN3-211ENST00000494559 IGKV2D-24A0A075B6R9 120 aa10.28□□□□□ -0.76
PDZRN3-211ENST00000494559 C2orf48Q96LS8 159 aa10.28□□□□□ -0.76
PDZRN3-211ENST00000494559 LECT2O14960 151 aa10.27□□□□□ -0.76
PDZRN3-211ENST00000494559 DNAL4O96015 105 aa10.27□□□□□ -0.76
PDZRN3-211ENST00000494559 MDFIQ99750 246 aa10.27□□□□□ -0.76
PDZRN3-211ENST00000494559 MT-ATP8P03928 68 aa10.27□□□□□ -0.77
PDZRN3-211ENST00000494559 Q6ZRU5 148 aa10.27□□□□□ -0.77
PDZRN3-211ENST00000494559 MGAM2Q2M2H8 2515 aa10.26□□□□□ -0.77
PDZRN3-211ENST00000494559 S100A7L2Q5SY68 101 aa10.25□□□□□ -0.77
PDZRN3-211ENST00000494559 XAGE1AQ9HD64 81 aa10.25□□□□□ -0.77
PDZRN3-211ENST00000494559 FAM240AA0A1B0GVK7 77 aa10.24□□□□□ -0.77
PDZRN3-211ENST00000494559 IGLV6-57P01721 117 aa10.24□□□□□ -0.77
PDZRN3-211ENST00000494559 A0A1B0GX51 115 aa10.24□□□□□ -0.77
PDZRN3-211ENST00000494559 F8WDY8 70 aa10.24□□□□□ -0.77
PDZRN3-211ENST00000494559 LINC00167Q96N53 147 aa10.24□□□□□ -0.77
PDZRN3-211ENST00000494559 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
PDZRN3-211ENST00000494559 C6orf99Q4VX62 202 aa10.23□□□□□ -0.77
PDZRN3-211ENST00000494559 SLPIP03973 132 aa10.22□□□□□ -0.77
PDZRN3-211ENST00000494559 NDUFC2-KCTD14E9PQ53 114 aa10.21□□□□□ -0.77
PDZRN3-211ENST00000494559 Q8N814 137 aa10.21□□□□□ -0.77
PDZRN3-211ENST00000494559 UPK3BQ9BT76 320 aa10.21□□□□□ -0.77
PDZRN3-211ENST00000494559 VPREB1P12018 145 aa10.19□□□□□ -0.78
PDZRN3-211ENST00000494559 C9orf129Q5T035 196 aaKnown RBP10.19□□□□□ -0.78
PDZRN3-211ENST00000494559 OBSCN-AS1Q96MR7 158 aa10.19□□□□□ -0.78
PDZRN3-211ENST00000494559 ORMDL1Q9P0S3 153 aa10.19□□□□□ -0.78
PDZRN3-211ENST00000494559 SYCNQ0VAF6 134 aa10.19□□□□□ -0.78
PDZRN3-211ENST00000494559 TRBV10-3A0A0K0K1G6 114 aa10.18□□□□□ -0.78
PDZRN3-211ENST00000494559 INAFM2P0DMQ5 153 aa10.18□□□□□ -0.78
PDZRN3-211ENST00000494559 LINC00575Q6W349 94 aa10.18□□□□□ -0.78
PDZRN3-211ENST00000494559 DNAH9Q9NYC9 4486 aa10.17□□□□□ -0.78
PDZRN3-211ENST00000494559 ACYP1P07311 99 aa10.17□□□□□ -0.78
PDZRN3-211ENST00000494559 Q6ZRP5 223 aa10.17□□□□□ -0.78
PDZRN3-211ENST00000494559 DNAH1Q9P2D7 4330 aa10.17□□□□□ -0.78
PDZRN3-211ENST00000494559 CASC10Q5T4H9 136 aa10.16□□□□□ -0.78
PDZRN3-211ENST00000494559 GAGE2EQ4V326 116 aa10.16□□□□□ -0.78
PDZRN3-211ENST00000494559 GAGE2DQ9UEU5 116 aa10.16□□□□□ -0.78
PDZRN3-211ENST00000494559 TRAV23DV6A0A075B6W5 121 aa10.14□□□□□ -0.79
PDZRN3-211ENST00000494559 B9D2Q9BPU9 175 aa10.14□□□□□ -0.79
PDZRN3-211ENST00000494559 USP17L23D6RBM5 183 aa10.14□□□□□ -0.79
PDZRN3-211ENST00000494559 M0R378 163 aa10.14□□□□□ -0.79
PDZRN3-211ENST00000494559 RMI2Q96E14 147 aa10.14□□□□□ -0.79
PDZRN3-211ENST00000494559 SNCGO76070 127 aa10.13□□□□□ -0.79
PDZRN3-211ENST00000494559 COL7A1Q02388 2944 aa10.13□□□□□ -0.79
PDZRN3-211ENST00000494559 C14orf132Q9NPU4 83 aa10.13□□□□□ -0.79
PDZRN3-211ENST00000494559 hADV29S1A0JD25 119 aa10.12□□□□□ -0.79
PDZRN3-211ENST00000494559 TMEM256-PLSCR3K7ERE1 68 aa10.12□□□□□ -0.79
PDZRN3-211ENST00000494559 TLX1NBP0CAT3 122 aa10.12□□□□□ -0.79
PDZRN3-211ENST00000494559 SDIM1Q6ZPB5 146 aa10.12□□□□□ -0.79
PDZRN3-211ENST00000494559 TTC32Q5I0X7 151 aa10.11□□□□□ -0.79
PDZRN3-211ENST00000494559 DIRC1Q969H9 104 aa10.11□□□□□ -0.79
PDZRN3-211ENST00000494559 ZNF73O43830 326 aaPredicted RBP10.11□□□□□ -0.79
PDZRN3-211ENST00000494559 STAB2Q8WWQ8 2551 aa10.1□□□□□ -0.79
PDZRN3-211ENST00000494559 GAGE2AQ6NT46 116 aa10.1□□□□□ -0.79
PDZRN3-211ENST00000494559 SMCR5Q8TEV8 140 aa10.1□□□□□ -0.79
PDZRN3-211ENST00000494559 APLNQ9ULZ1 77 aa10.1□□□□□ -0.79
PDZRN3-211ENST00000494559 TRBV7-6A0A0J9YX20 115 aa10.08□□□□□ -0.8
PDZRN3-211ENST00000494559 ELOF1P60002 83 aaKnown RBP10.08□□□□□ -0.8
PDZRN3-211ENST00000494559 Q6Q795 121 aa10.08□□□□□ -0.8
PDZRN3-211ENST00000494559 KRTAP1-5Q9BYS1 174 aa10.08□□□□□ -0.8
PDZRN3-211ENST00000494559 JMJD7-PLA2G4BH0Y9G9 81 aa10.06□□□□□ -0.8
PDZRN3-211ENST00000494559 COX7BP24311 80 aa10.06□□□□□ -0.8
PDZRN3-211ENST00000494559 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
PDZRN3-211ENST00000494559 SERTAD4-AS1Q5TG53 156 aa10.06□□□□□ -0.8
PDZRN3-211ENST00000494559 PLA2G2DQ9UNK4 145 aa10.06□□□□□ -0.8
PDZRN3-211ENST00000494559 Q6ZQY7 126 aa10.05□□□□□ -0.8
PDZRN3-211ENST00000494559 LINC00643Q86TS7 51 aa10.05□□□□□ -0.8
PDZRN3-211ENST00000494559 DYNC2H1Q8NCM8 4307 aaKnown RBP10.04□□□□□ -0.8
PDZRN3-211ENST00000494559 TRBV7-7A0A0K0K1E9 115 aa10.03□□□□□ -0.8
PDZRN3-211ENST00000494559 CCKP06307 115 aa10.03□□□□□ -0.8
PDZRN3-211ENST00000494559 NKAPP1Q8N9T2 125 aa10.03□□□□□ -0.8
PDZRN3-211ENST00000494559 C7orf33Q8WU49 177 aa10.03□□□□□ -0.8
PDZRN3-211ENST00000494559 LINC00528Q8N1L1 170 aa10.02□□□□□ -0.81
PDZRN3-211ENST00000494559 KCNQ1DNQ9H478 68 aa10.02□□□□□ -0.81
PDZRN3-211ENST00000494559 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
PDZRN3-211ENST00000494559 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.02□□□□□ -0.81
PDZRN3-211ENST00000494559 UBE2DNLQ8IWF7 75 aa10.02□□□□□ -0.81
PDZRN3-211ENST00000494559 H3BQ85 93 aa10.01□□□□□ -0.81
PDZRN3-211ENST00000494559 NHLRC4P0CG21 123 aaPredicted RBP10□□□□□ -0.81
PDZRN3-211ENST00000494559 KRTAP7-1Q8IUC3 87 aa10□□□□□ -0.81
PDZRN3-211ENST00000494559 FAM168BA1KXE4 195 aa10□□□□□ -0.81
PDZRN3-211ENST00000494559 LINC00846Q9NV44 126 aa10□□□□□ -0.81
PDZRN3-211ENST00000494559 LOC107984640A0A0U1RRK4 108 aa9.98□□□□□ -0.81
PDZRN3-211ENST00000494559 IMUPQ9GZP8 106 aa9.98□□□□□ -0.81
PDZRN3-211ENST00000494559 SS18L2Q9UHA2 77 aa9.98□□□□□ -0.81
PDZRN3-211ENST00000494559 RBM3P98179 157 aaKnown RBP9.97□□□□□ -0.81
PDZRN3-211ENST00000494559 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
PDZRN3-211ENST00000494559 NUPR2A6NF83 97 aa9.96□□□□□ -0.81
PDZRN3-211ENST00000494559 NDUFV3P56181 108 aaKnown RBP9.96□□□□□ -0.81
PDZRN3-211ENST00000494559 LYSTQ99698 3801 aa9.96□□□□□ -0.82
PDZRN3-211ENST00000494559 IGLV1-50A0A075B6I6 118 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms