RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 UBE2BP63146 152 aa7.76□□□□□ -1.17
TRA2A-209ENST00000494255 C22orf24Q9Y442 160 aa7.76□□□□□ -1.17
TRA2A-209ENST00000494255 LBHQ53QV2 105 aaPredicted RBP7.76□□□□□ -1.17
TRA2A-209ENST00000494255 NKAPP1Q8N9T2 125 aa7.76□□□□□ -1.17
TRA2A-209ENST00000494255 TP73-AS1Q9UF72 201 aa7.76□□□□□ -1.17
TRA2A-209ENST00000494255 ATOH7Q8N100 152 aa7.75□□□□□ -1.17
TRA2A-209ENST00000494255 RPL24P83731 157 aaKnown RBP7.74□□□□□ -1.17
TRA2A-209ENST00000494255 MRPL55Q7Z7F7 128 aaKnown RBP7.74□□□□□ -1.17
TRA2A-209ENST00000494255 MIR7-3HGQ8N6C7 128 aa7.74□□□□□ -1.17
TRA2A-209ENST00000494255 IGLV5-37A0A075B6J1 123 aa7.73□□□□□ -1.17
TRA2A-209ENST00000494255 PSORS1C2Q9UIG4 136 aa7.73□□□□□ -1.17
TRA2A-209ENST00000494255 IGKV2D-26A0A0A0MRZ7 120 aa7.72□□□□□ -1.17
TRA2A-209ENST00000494255 ZNF815PA8K554 130 aa7.72□□□□□ -1.17
TRA2A-209ENST00000494255 C1orf137Q5JT78 98 aa7.72□□□□□ -1.17
TRA2A-209ENST00000494255 FAT1Q14517 4588 aa7.72□□□□□ -1.17
TRA2A-209ENST00000494255 VPS13BQ7Z7G8 4022 aa7.71□□□□□ -1.18
TRA2A-209ENST00000494255 A0A0J9YXY3 114 aa7.71□□□□□ -1.18
TRA2A-209ENST00000494255 VPREB1P12018 145 aa7.71□□□□□ -1.18
TRA2A-209ENST00000494255 GAGE10A6NGK3 116 aa7.7□□□□□ -1.18
TRA2A-209ENST00000494255 HSBP1L1C9JCN9 74 aa7.7□□□□□ -1.18
TRA2A-209ENST00000494255 SCGB1D1O95968 90 aa7.7□□□□□ -1.18
TRA2A-209ENST00000494255 HNRNPA3P51991 378 aaKnown RBP7.7□□□□□ -1.18
TRA2A-209ENST00000494255 ANKRD39Q53RE8 183 aa7.7□□□□□ -1.18
TRA2A-209ENST00000494255 KRTAP11-1Q8IUC1 163 aa7.7□□□□□ -1.18
TRA2A-209ENST00000494255 LINC00167Q96N53 147 aa7.7□□□□□ -1.18
TRA2A-209ENST00000494255 SRRM2Q9UQ35 2752 aaKnown RBP7.7□□□□□ -1.18
TRA2A-209ENST00000494255 BOD1L2Q8IYS8 172 aa7.7□□□□□ -1.18
TRA2A-209ENST00000494255 DAND5Q8N907 189 aa7.7□□□□□ -1.18
TRA2A-209ENST00000494255 MIEN1Q9BRT3 115 aa7.7□□□□□ -1.18
TRA2A-209ENST00000494255 RPL37AP8A6NKH3 93 aa7.69□□□□□ -1.18
TRA2A-209ENST00000494255 TTTY13Q9BZ97 58 aa7.69□□□□□ -1.18
TRA2A-209ENST00000494255 TIMM17BO60830 172 aa7.68□□□□□ -1.18
TRA2A-209ENST00000494255 TMA7Q9Y2S6 64 aaKnown RBP7.68□□□□□ -1.18
TRA2A-209ENST00000494255 M0R378 163 aa7.67□□□□□ -1.18
TRA2A-209ENST00000494255 SPINK6Q6UWN8 80 aa7.67□□□□□ -1.18
TRA2A-209ENST00000494255 Q8NDZ9 215 aa7.67□□□□□ -1.18
TRA2A-209ENST00000494255 LOC107984156A0A0G2JMH3 177 aa7.67□□□□□ -1.18
TRA2A-209ENST00000494255 IGLV7-43P04211 117 aa7.67□□□□□ -1.18
TRA2A-209ENST00000494255 SCGB1D4Q6XE38 83 aa7.67□□□□□ -1.18
TRA2A-209ENST00000494255 ARL17AQ8IVW1 177 aa7.67□□□□□ -1.18
TRA2A-209ENST00000494255 IGKV2-28A0A075B6P5 120 aa7.66□□□□□ -1.18
TRA2A-209ENST00000494255 IGKV2D-28P01615 120 aa7.66□□□□□ -1.18
TRA2A-209ENST00000494255 ADAMTSL4-AS1Q5T5F5 129 aa7.66□□□□□ -1.18
TRA2A-209ENST00000494255 NCR3O14931 201 aa7.65□□□□□ -1.18
TRA2A-209ENST00000494255 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.18
TRA2A-209ENST00000494255 PCP2Q8IVA1 136 aa7.65□□□□□ -1.18
TRA2A-209ENST00000494255 IGLV1-50A0A075B6I6 118 aa7.64□□□□□ -1.19
TRA2A-209ENST00000494255 NPC2P61916 151 aa7.64□□□□□ -1.19
TRA2A-209ENST00000494255 LITAFQ99732 161 aa7.64□□□□□ -1.19
TRA2A-209ENST00000494255 ABCA13Q86UQ4 5058 aa7.64□□□□□ -1.19
TRA2A-209ENST00000494255 FLG2Q5D862 2391 aaPredicted RBP7.64□□□□□ -1.19
TRA2A-209ENST00000494255 TMEM238C9JI98 176 aa7.63□□□□□ -1.19
TRA2A-209ENST00000494255 BCE1O60756 84 aa7.63□□□□□ -1.19
TRA2A-209ENST00000494255 NDUFC2O95298 119 aa7.63□□□□□ -1.19
TRA2A-209ENST00000494255 OXTP01178 125 aa7.63□□□□□ -1.19
TRA2A-209ENST00000494255 DIRC1Q969H9 104 aa7.63□□□□□ -1.19
TRA2A-209ENST00000494255 PCLOQ9Y6V0 5065 aa7.63□□□□□ -1.19
TRA2A-209ENST00000494255 KRTAP29-1A8MX34 341 aaPredicted RBP7.62□□□□□ -1.19
TRA2A-209ENST00000494255 REG3GQ6UW15 175 aa7.62□□□□□ -1.19
TRA2A-209ENST00000494255 SOSTDC1Q6X4U4 206 aa7.62□□□□□ -1.19
TRA2A-209ENST00000494255 LINC00308Q8TCZ7 52 aa7.62□□□□□ -1.19
TRA2A-209ENST00000494255 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
TRA2A-209ENST00000494255 TRBV10-2A0A0K0K1G8 114 aa7.61□□□□□ -1.19
TRA2A-209ENST00000494255 J3QL48 77 aa7.61□□□□□ -1.19
TRA2A-209ENST00000494255 S100A12P80511 92 aa7.61□□□□□ -1.19
TRA2A-209ENST00000494255 COPS9Q8WXC6 57 aa7.61□□□□□ -1.19
TRA2A-209ENST00000494255 SPANXDQ9BXN6 97 aa7.61□□□□□ -1.19
TRA2A-209ENST00000494255 SPANXCQ9NY87 97 aa7.61□□□□□ -1.19
TRA2A-209ENST00000494255 ZNF861PO60384 105 aa7.6□□□□□ -1.19
TRA2A-209ENST00000494255 RPL28P46779 137 aaKnown RBP7.6□□□□□ -1.19
TRA2A-209ENST00000494255 UBE2AP49459 152 aa7.6□□□□□ -1.19
TRA2A-209ENST00000494255 JOSD1Q15040 202 aaPredicted RBP7.6□□□□□ -1.19
TRA2A-209ENST00000494255 TMEM126AQ9H061 195 aa7.6□□□□□ -1.19
TRA2A-209ENST00000494255 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
TRA2A-209ENST00000494255 TRBV10-3A0A0K0K1G6 114 aa7.59□□□□□ -1.19
TRA2A-209ENST00000494255 H0Y9J4 135 aa7.59□□□□□ -1.19
TRA2A-209ENST00000494255 PRYO14603 147 aa7.59□□□□□ -1.19
TRA2A-209ENST00000494255 S100A7L2Q5SY68 101 aa7.59□□□□□ -1.19
TRA2A-209ENST00000494255 Q6ZVH6 145 aa7.59□□□□□ -1.19
TRA2A-209ENST00000494255 VAMP8Q9BV40 100 aa7.59□□□□□ -1.19
TRA2A-209ENST00000494255 IFITM1P13164 125 aa7.58□□□□□ -1.2
TRA2A-209ENST00000494255 DDTP30046 118 aa7.58□□□□□ -1.2
TRA2A-209ENST00000494255 FAM19A1Q7Z5A9 133 aa7.58□□□□□ -1.2
TRA2A-209ENST00000494255 PKHD1L1Q86WI1 4243 aa7.57□□□□□ -1.2
TRA2A-209ENST00000494255 COX8AP10176 69 aa7.57□□□□□ -1.2
TRA2A-209ENST00000494255 SPATA45Q537H7 98 aa7.57□□□□□ -1.2
TRA2A-209ENST00000494255 KCNQ1DNQ9H478 68 aa7.57□□□□□ -1.2
TRA2A-209ENST00000494255 PAM16Q9Y3D7 125 aa7.57□□□□□ -1.2
TRA2A-209ENST00000494255 LINC00518Q8N0U6 118 aa7.56□□□□□ -1.2
TRA2A-209ENST00000494255 CBY1Q9Y3M2 126 aa7.56□□□□□ -1.2
TRA2A-209ENST00000494255 PRLHP81277 87 aa7.55□□□□□ -1.2
TRA2A-209ENST00000494255 OR13C6PQ8NH95 151 aa7.55□□□□□ -1.2
TRA2A-209ENST00000494255 PPDPFQ9H3Y8 114 aa7.55□□□□□ -1.2
TRA2A-209ENST00000494255 ETDCA0A1B0GVM5 59 aa7.54□□□□□ -1.2
TRA2A-209ENST00000494255 IGLV6-57P01721 117 aa7.54□□□□□ -1.2
TRA2A-209ENST00000494255 KRTAP13-1Q8IUC0 172 aa7.54□□□□□ -1.2
TRA2A-209ENST00000494255 MUSTN1Q8IVN3 82 aa7.54□□□□□ -1.2
TRA2A-209ENST00000494255 LINC01600Q96MT4 127 aa7.54□□□□□ -1.2
TRA2A-209ENST00000494255 DLEU1O43261 78 aa7.54□□□□□ -1.2
TRA2A-209ENST00000494255 PYY3Q5JQD4 70 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms