RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 LINC01620Q4KN68 170 aa7.96□□□□□ -1.14
SNX17-208ENST00000493711 Q6ZVH6 145 aa7.96□□□□□ -1.14
SNX17-208ENST00000493711 TTTY13Q9BZ97 58 aa7.96□□□□□ -1.14
SNX17-208ENST00000493711 A0A096LNI7 61 aa7.95□□□□□ -1.14
SNX17-208ENST00000493711 KRTAP10-1P60331 282 aa7.95□□□□□ -1.14
SNX17-208ENST00000493711 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
SNX17-208ENST00000493711 DPH3Q96FX2 82 aa7.95□□□□□ -1.14
SNX17-208ENST00000493711 C14orf144Q96I85 54 aa7.95□□□□□ -1.14
SNX17-208ENST00000493711 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
SNX17-208ENST00000493711 IGKV2-24A0A0C4DH68 120 aa7.94□□□□□ -1.14
SNX17-208ENST00000493711 Q6ZSA8 131 aa7.94□□□□□ -1.14
SNX17-208ENST00000493711 MIR7-3HGQ8N6C7 128 aa7.94□□□□□ -1.14
SNX17-208ENST00000493711 MIEN1Q9BRT3 115 aa7.94□□□□□ -1.14
SNX17-208ENST00000493711 FAT2Q9NYQ8 4349 aa7.93□□□□□ -1.14
SNX17-208ENST00000493711 A0A0U1RRA0 63 aa7.93□□□□□ -1.14
SNX17-208ENST00000493711 IFITM1P13164 125 aa7.93□□□□□ -1.14
SNX17-208ENST00000493711 SPACA4Q8TDM5 124 aa7.93□□□□□ -1.14
SNX17-208ENST00000493711 SPANXDQ9BXN6 97 aa7.93□□□□□ -1.14
SNX17-208ENST00000493711 PPDPFQ9H3Y8 114 aa7.93□□□□□ -1.14
SNX17-208ENST00000493711 SND1-IT1Q9HBX3 110 aa7.93□□□□□ -1.14
SNX17-208ENST00000493711 SPANXCQ9NY87 97 aa7.93□□□□□ -1.14
SNX17-208ENST00000493711 HIGD1BQ9P298 99 aa7.93□□□□□ -1.14
SNX17-208ENST00000493711 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
SNX17-208ENST00000493711 LOC107984156A0A0G2JMH3 177 aa7.92□□□□□ -1.14
SNX17-208ENST00000493711 RPL24P83731 157 aaKnown RBP7.92□□□□□ -1.14
SNX17-208ENST00000493711 ARL17AQ8IVW1 177 aa7.92□□□□□ -1.14
SNX17-208ENST00000493711 C12orf57Q99622 126 aa7.92□□□□□ -1.14
SNX17-208ENST00000493711 LITAFQ99732 161 aa7.92□□□□□ -1.14
SNX17-208ENST00000493711 SPANXB1Q9NS25 103 aaPredicted RBP7.92□□□□□ -1.14
SNX17-208ENST00000493711 UQCR10Q9UDW1 63 aa7.92□□□□□ -1.14
SNX17-208ENST00000493711 PLA2G2DQ9UNK4 145 aa7.92□□□□□ -1.14
SNX17-208ENST00000493711 SRSF9Q13242 221 aaKnown RBP eCLIP7.91□□□□□ -1.14
SNX17-208ENST00000493711 LCE4AQ5TA78 99 aa7.91□□□□□ -1.14
SNX17-208ENST00000493711 XAGE1AQ9HD64 81 aa7.91□□□□□ -1.14
SNX17-208ENST00000493711 CHTF8P0CG12 524 aa7.9□□□□□ -1.14
SNX17-208ENST00000493711 C9orf129Q5T035 196 aaKnown RBP7.9□□□□□ -1.14
SNX17-208ENST00000493711 ADAMTSL4-AS1Q5T5F5 129 aa7.9□□□□□ -1.14
SNX17-208ENST00000493711 LINC00518Q8N0U6 118 aa7.9□□□□□ -1.14
SNX17-208ENST00000493711 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
SNX17-208ENST00000493711 LINC00308Q8TCZ7 52 aa7.89□□□□□ -1.15
SNX17-208ENST00000493711 IGLV5-37A0A075B6J1 123 aa7.88□□□□□ -1.15
SNX17-208ENST00000493711 A0A087WYN8 130 aa7.88□□□□□ -1.15
SNX17-208ENST00000493711 EPM2AB3EWF7 344 aa7.88□□□□□ -1.15
SNX17-208ENST00000493711 TSTD3H0UI37 97 aa7.88□□□□□ -1.15
SNX17-208ENST00000493711 NDUFC2O95298 119 aa7.88□□□□□ -1.15
SNX17-208ENST00000493711 TAL2Q16559 108 aa7.88□□□□□ -1.15
SNX17-208ENST00000493711 DAND5Q8N907 189 aa7.88□□□□□ -1.15
SNX17-208ENST00000493711 NKAPP1Q8N9T2 125 aa7.88□□□□□ -1.15
SNX17-208ENST00000493711 HIST1H4GQ99525 98 aa7.88□□□□□ -1.15
SNX17-208ENST00000493711 FAM30AQ9NZY2 134 aa7.88□□□□□ -1.15
SNX17-208ENST00000493711 TP73-AS1Q9UF72 201 aa7.88□□□□□ -1.15
SNX17-208ENST00000493711 HERC1Q15751 4861 aa7.87□□□□□ -1.15
SNX17-208ENST00000493711 CDK2AP2O75956 126 aa7.87□□□□□ -1.15
SNX17-208ENST00000493711 LBHQ53QV2 105 aaPredicted RBP7.87□□□□□ -1.15
SNX17-208ENST00000493711 LCE1DQ5T752 114 aa7.87□□□□□ -1.15
SNX17-208ENST00000493711 KRTAP4-5Q9BYR2 181 aa7.87□□□□□ -1.15
SNX17-208ENST00000493711 DYNC1H1Q14204 4646 aaKnown RBP7.86□□□□□ -1.15
SNX17-208ENST00000493711 PANO1I0J062 215 aa7.86□□□□□ -1.15
SNX17-208ENST00000493711 FAM19A5Q7Z5A7 132 aaPredicted RBP7.86□□□□□ -1.15
SNX17-208ENST00000493711 PKD1P98161 4303 aa7.86□□□□□ -1.15
SNX17-208ENST00000493711 A0A1W2PNN7 141 aa7.85□□□□□ -1.15
SNX17-208ENST00000493711 VPREB1P12018 145 aa7.85□□□□□ -1.15
SNX17-208ENST00000493711 HNRNPA3P51991 378 aaKnown RBP7.85□□□□□ -1.15
SNX17-208ENST00000493711 C2orf91Q6ZV80 131 aa7.85□□□□□ -1.15
SNX17-208ENST00000493711 SCXQ7RTU7 201 aa7.85□□□□□ -1.15
SNX17-208ENST00000493711 CIRBP-AS1Q8TBR5 109 aa7.85□□□□□ -1.15
SNX17-208ENST00000493711 DNAH11Q96DT5 4516 aa7.84□□□□□ -1.15
SNX17-208ENST00000493711 TRBV10-2A0A0K0K1G8 114 aa7.84□□□□□ -1.15
SNX17-208ENST00000493711 M0QXV9 152 aa7.84□□□□□ -1.15
SNX17-208ENST00000493711 M0R378 163 aa7.84□□□□□ -1.15
SNX17-208ENST00000493711 MUSTN1Q8IVN3 82 aa7.84□□□□□ -1.15
SNX17-208ENST00000493711 PRO1933Q9H354 126 aa7.84□□□□□ -1.15
SNX17-208ENST00000493711 C22orf24Q9Y442 160 aa7.84□□□□□ -1.15
SNX17-208ENST00000493711 FAM168BA1KXE4 195 aa7.83□□□□□ -1.16
SNX17-208ENST00000493711 NPC2P61916 151 aa7.83□□□□□ -1.16
SNX17-208ENST00000493711 HSD52Q0P140 79 aa7.83□□□□□ -1.16
SNX17-208ENST00000493711 SERTAD4-AS1Q5TG53 156 aa7.83□□□□□ -1.16
SNX17-208ENST00000493711 SOSTDC1Q6X4U4 206 aa7.83□□□□□ -1.16
SNX17-208ENST00000493711 MRPL55Q7Z7F7 128 aaKnown RBP7.83□□□□□ -1.16
SNX17-208ENST00000493711 C7orf33Q8WU49 177 aa7.83□□□□□ -1.16
SNX17-208ENST00000493711 CBY1Q9Y3M2 126 aa7.83□□□□□ -1.16
SNX17-208ENST00000493711 XGP55808 180 aa7.82□□□□□ -1.16
SNX17-208ENST00000493711 KRTAP7-1Q8IUC3 87 aa7.81□□□□□ -1.16
SNX17-208ENST00000493711 CEND1Q8N111 149 aa7.8□□□□□ -1.16
SNX17-208ENST00000493711 TRAV13-2A0A0B4J235 113 aa7.79□□□□□ -1.16
SNX17-208ENST00000493711 UBE2BP63146 152 aa7.79□□□□□ -1.16
SNX17-208ENST00000493711 S100A7L2Q5SY68 101 aa7.79□□□□□ -1.16
SNX17-208ENST00000493711 HSPG2P98160 4391 aa7.79□□□□□ -1.16
SNX17-208ENST00000493711 A4D1N5 150 aa7.78□□□□□ -1.16
SNX17-208ENST00000493711 NCR3O14931 201 aa7.78□□□□□ -1.16
SNX17-208ENST00000493711 PHF5AQ7RTV0 110 aaKnown RBP7.78□□□□□ -1.16
SNX17-208ENST00000493711 Q8NDZ9 215 aa7.78□□□□□ -1.16
SNX17-208ENST00000493711 LINC00167Q96N53 147 aa7.78□□□□□ -1.16
SNX17-208ENST00000493711 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
SNX17-208ENST00000493711 M0R143 59 aa7.77□□□□□ -1.17
SNX17-208ENST00000493711 DDTP30046 118 aa7.77□□□□□ -1.17
SNX17-208ENST00000493711 PRR3P79522 188 aaKnown RBP7.77□□□□□ -1.17
SNX17-208ENST00000493711 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
SNX17-208ENST00000493711 IGLV1-50A0A075B6I6 118 aa7.76□□□□□ -1.17
SNX17-208ENST00000493711 GAGE10A6NGK3 116 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms