RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 C6orf99Q4VX62 202 aa8.38□□□□□ -1.07
HMGN1-220ENST00000492280 COL7A1Q02388 2944 aa8.37□□□□□ -1.07
HMGN1-220ENST00000492280 WIPF1O43516 503 aa8.37□□□□□ -1.07
HMGN1-220ENST00000492280 PPDPFQ9H3Y8 114 aa8.37□□□□□ -1.07
HMGN1-220ENST00000492280 HUWE1Q7Z6Z7 4374 aaKnown RBP8.37□□□□□ -1.07
HMGN1-220ENST00000492280 PRR34Q9NV39 138 aa8.36□□□□□ -1.07
HMGN1-220ENST00000492280 DNAH10Q8IVF4 4471 aa8.36□□□□□ -1.07
HMGN1-220ENST00000492280 NDUFV3P56181 108 aaKnown RBP8.36□□□□□ -1.07
HMGN1-220ENST00000492280 C6orf48Q9UBA6 75 aa8.36□□□□□ -1.07
HMGN1-220ENST00000492280 S100A7L2Q5SY68 101 aa8.35□□□□□ -1.07
HMGN1-220ENST00000492280 FAM240AA0A1B0GVK7 77 aa8.35□□□□□ -1.07
HMGN1-220ENST00000492280 H0YGX0 51 aa8.35□□□□□ -1.07
HMGN1-220ENST00000492280 ESRGQ1W209 222 aa8.35□□□□□ -1.07
HMGN1-220ENST00000492280 CXCL5P42830 114 aa8.34□□□□□ -1.07
HMGN1-220ENST00000492280 LINC01561Q8N1V8 128 aa8.33□□□□□ -1.08
HMGN1-220ENST00000492280 MRAPQ8TCY5 172 aa8.33□□□□□ -1.08
HMGN1-220ENST00000492280 CCDC179H3BU77 68 aa8.32□□□□□ -1.08
HMGN1-220ENST00000492280 KLK5Q9Y337 293 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-220ENST00000492280 TMEM126AQ9H061 195 aa8.32□□□□□ -1.08
HMGN1-220ENST00000492280 COX17Q14061 63 aa8.31□□□□□ -1.08
HMGN1-220ENST00000492280 ORMDL1Q9P0S3 153 aa8.31□□□□□ -1.08
HMGN1-220ENST00000492280 Q8N814 137 aa8.31□□□□□ -1.08
HMGN1-220ENST00000492280 DEFB131BA0A096LNP1 70 aa8.31□□□□□ -1.08
HMGN1-220ENST00000492280 FAM236AA0A1B0GUQ0 79 aa8.31□□□□□ -1.08
HMGN1-220ENST00000492280 FAM236BA0A1B0GV22 79 aa8.31□□□□□ -1.08
HMGN1-220ENST00000492280 INAFM2P0DMQ5 153 aa8.31□□□□□ -1.08
HMGN1-220ENST00000492280 IGKV2D-24A0A075B6R9 120 aa8.3□□□□□ -1.08
HMGN1-220ENST00000492280 IGKV3D-7A0A0C4DH55 119 aa8.3□□□□□ -1.08
HMGN1-220ENST00000492280 TRBV10-3A0A0K0K1G6 114 aa8.3□□□□□ -1.08
HMGN1-220ENST00000492280 CAMK2N2Q96S95 79 aa8.3□□□□□ -1.08
HMGN1-220ENST00000492280 ZNF561-AS1K7EIQ3 104 aa8.3□□□□□ -1.08
HMGN1-220ENST00000492280 NDUFC2O95298 119 aa8.3□□□□□ -1.08
HMGN1-220ENST00000492280 SDIM1Q6ZPB5 146 aa8.3□□□□□ -1.08
HMGN1-220ENST00000492280 Q6ZRU5 148 aa8.3□□□□□ -1.08
HMGN1-220ENST00000492280 LINC00846Q9NV44 126 aa8.3□□□□□ -1.08
HMGN1-220ENST00000492280 C11orf45Q8TAV5 145 aa8.29□□□□□ -1.08
HMGN1-220ENST00000492280 B5MCH6 92 aa8.29□□□□□ -1.08
HMGN1-220ENST00000492280 C15orf56Q8N910 161 aa8.29□□□□□ -1.08
HMGN1-220ENST00000492280 EGFEM1PQ0D2K5 195 aa8.28□□□□□ -1.08
HMGN1-220ENST00000492280 KRTAP26-1Q6PEX3 210 aa8.28□□□□□ -1.08
HMGN1-220ENST00000492280 TRBV7-7A0A0K0K1E9 115 aa8.26□□□□□ -1.09
HMGN1-220ENST00000492280 A0A087WVE0 104 aa8.26□□□□□ -1.09
HMGN1-220ENST00000492280 ACYP1P07311 99 aa8.26□□□□□ -1.09
HMGN1-220ENST00000492280 Q6Q795 121 aa8.26□□□□□ -1.09
HMGN1-220ENST00000492280 DNAH1Q9P2D7 4330 aa8.26□□□□□ -1.09
HMGN1-220ENST00000492280 CASC10Q5T4H9 136 aa8.25□□□□□ -1.09
HMGN1-220ENST00000492280 LINC00643Q86TS7 51 aa8.25□□□□□ -1.09
HMGN1-220ENST00000492280 SS18L2Q9UHA2 77 aa8.25□□□□□ -1.09
HMGN1-220ENST00000492280 DNAH9Q9NYC9 4486 aa8.25□□□□□ -1.09
HMGN1-220ENST00000492280 C1orf43Q9BWL3 253 aa8.25□□□□□ -1.09
HMGN1-220ENST00000492280 M0R2N4 97 aa8.24□□□□□ -1.09
HMGN1-220ENST00000492280 Q6ZQY7 126 aa8.24□□□□□ -1.09
HMGN1-220ENST00000492280 OBSCN-AS1Q96MR7 158 aa8.24□□□□□ -1.09
HMGN1-220ENST00000492280 LINC00575Q6W349 94 aa8.24□□□□□ -1.09
HMGN1-220ENST00000492280 IGLV6-57P01721 117 aa8.23□□□□□ -1.09
HMGN1-220ENST00000492280 DNAH7Q8WXX0 4024 aa8.23□□□□□ -1.09
HMGN1-220ENST00000492280 TRAV23DV6A0A075B6W5 121 aa8.23□□□□□ -1.09
HMGN1-220ENST00000492280 Q6ZRP5 223 aa8.23□□□□□ -1.09
HMGN1-220ENST00000492280 LINC00167Q96N53 147 aa8.23□□□□□ -1.09
HMGN1-220ENST00000492280 hADV29S1A0JD25 119 aa8.22□□□□□ -1.09
HMGN1-220ENST00000492280 LAMTOR3Q9UHA4 124 aa8.22□□□□□ -1.09
HMGN1-220ENST00000492280 GVQW2A0A096LPI5 108 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-220ENST00000492280 VPREB1P12018 145 aa8.2□□□□□ -1.1
HMGN1-220ENST00000492280 TMEM256-PLSCR3K7ERE1 68 aa8.2□□□□□ -1.1
HMGN1-220ENST00000492280 H3BNG1 76 aa8.19□□□□□ -1.1
HMGN1-220ENST00000492280 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
HMGN1-220ENST00000492280 LINC01556Q5JQF7 62 aa8.19□□□□□ -1.1
HMGN1-220ENST00000492280 DIRC1Q969H9 104 aa8.19□□□□□ -1.1
HMGN1-220ENST00000492280 LINC00588Q9Y4M8 146 aa8.19□□□□□ -1.1
HMGN1-220ENST00000492280 K7EIL1 84 aa8.18□□□□□ -1.1
HMGN1-220ENST00000492280 CCKP06307 115 aa8.18□□□□□ -1.1
HMGN1-220ENST00000492280 NDUFC2-KCTD14E9PQ53 114 aa8.17□□□□□ -1.1
HMGN1-220ENST00000492280 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
HMGN1-220ENST00000492280 FAM168BA1KXE4 195 aa8.17□□□□□ -1.1
HMGN1-220ENST00000492280 SRRM2Q9UQ35 2752 aaKnown RBP8.17□□□□□ -1.1
HMGN1-220ENST00000492280 HIST1H4AP62805 103 aaKnown RBP8.16□□□□□ -1.1
HMGN1-220ENST00000492280 SYCNQ0VAF6 134 aa8.16□□□□□ -1.1
HMGN1-220ENST00000492280 PLECQ15149 4684 aaKnown RBP8.16□□□□□ -1.1
HMGN1-220ENST00000492280 A0A1B0GX51 115 aa8.16□□□□□ -1.1
HMGN1-220ENST00000492280 JMJD7-PLA2G4BH0Y9G9 81 aa8.15□□□□□ -1.1
HMGN1-220ENST00000492280 COX7BP24311 80 aa8.15□□□□□ -1.1
HMGN1-220ENST00000492280 RPL37AP8A6NKH3 93 aa8.14□□□□□ -1.11
HMGN1-220ENST00000492280 RBM3P98179 157 aaKnown RBP8.14□□□□□ -1.11
HMGN1-220ENST00000492280 FAM19A1Q7Z5A9 133 aa8.14□□□□□ -1.11
HMGN1-220ENST00000492280 IMUPQ9GZP8 106 aa8.14□□□□□ -1.11
HMGN1-220ENST00000492280 USP17L23D6RBM5 183 aa8.13□□□□□ -1.11
HMGN1-220ENST00000492280 TRAV10A0A0B4J240 114 aa8.12□□□□□ -1.11
HMGN1-220ENST00000492280 DNAH10OSP0CZ25 163 aa8.12□□□□□ -1.11
HMGN1-220ENST00000492280 ELOF1P60002 83 aaKnown RBP8.12□□□□□ -1.11
HMGN1-220ENST00000492280 Q6ZQT0 140 aa8.12□□□□□ -1.11
HMGN1-220ENST00000492280 Q6JHZ5 121 aa8.12□□□□□ -1.11
HMGN1-220ENST00000492280 C2orf48Q96LS8 159 aa8.12□□□□□ -1.11
HMGN1-220ENST00000492280 M0R378 163 aa8.11□□□□□ -1.11
HMGN1-220ENST00000492280 DEFB105AQ8NG35 78 aa8.11□□□□□ -1.11
HMGN1-220ENST00000492280 SCXQ7RTU7 201 aa8.11□□□□□ -1.11
HMGN1-220ENST00000492280 MUC7Q8TAX7 377 aa8.11□□□□□ -1.11
HMGN1-220ENST00000492280 C7orf33Q8WU49 177 aa8.1□□□□□ -1.11
HMGN1-220ENST00000492280 C3orf22Q8N5N4 141 aa8.1□□□□□ -1.11
HMGN1-220ENST00000492280 NKAPP1Q8N9T2 125 aa8.1□□□□□ -1.11
HMGN1-220ENST00000492280 TM2D3Q9BRN9 247 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms