RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 GAGE2EQ4V326 116 aa7.94□□□□□ -1.14
SEC61A1-206ENST00000491668 LINC00474Q9P2X8 69 aa7.94□□□□□ -1.14
SEC61A1-206ENST00000491668 GAGE2DQ9UEU5 116 aa7.94□□□□□ -1.14
SEC61A1-206ENST00000491668 LINC00587B1AMM8 73 aa7.93□□□□□ -1.14
SEC61A1-206ENST00000491668 LINC00158P58513 81 aa7.93□□□□□ -1.14
SEC61A1-206ENST00000491668 ANKRD39Q53RE8 183 aa7.93□□□□□ -1.14
SEC61A1-206ENST00000491668 ERG28Q9UKR5 140 aa7.93□□□□□ -1.14
SEC61A1-206ENST00000491668 IGKV2D-26A0A0A0MRZ7 120 aa7.92□□□□□ -1.14
SEC61A1-206ENST00000491668 ZNF815PA8K554 130 aa7.92□□□□□ -1.14
SEC61A1-206ENST00000491668 PTTG1IPP53801 180 aa7.92□□□□□ -1.14
SEC61A1-206ENST00000491668 Q6ZRP5 223 aa7.92□□□□□ -1.14
SEC61A1-206ENST00000491668 TNXBP22105 4242 aa7.91□□□□□ -1.14
SEC61A1-206ENST00000491668 A0A0U1RRA0 63 aa7.91□□□□□ -1.14
SEC61A1-206ENST00000491668 TLX1NBP0CAT3 122 aa7.91□□□□□ -1.14
SEC61A1-206ENST00000491668 PRR3P79522 188 aaKnown RBP7.91□□□□□ -1.14
SEC61A1-206ENST00000491668 COX17Q14061 63 aa7.91□□□□□ -1.14
SEC61A1-206ENST00000491668 VAMP8Q9BV40 100 aa7.91□□□□□ -1.14
SEC61A1-206ENST00000491668 SCGB1D4Q6XE38 83 aa7.9□□□□□ -1.14
SEC61A1-206ENST00000491668 C7orf33Q8WU49 177 aa7.9□□□□□ -1.14
SEC61A1-206ENST00000491668 PAM16Q9Y3D7 125 aa7.9□□□□□ -1.14
SEC61A1-206ENST00000491668 UBR4Q5T4S7 5183 aa7.9□□□□□ -1.15
SEC61A1-206ENST00000491668 SMIM13P0DJ93 91 aa7.89□□□□□ -1.15
SEC61A1-206ENST00000491668 PYY3Q5JQD4 70 aa7.89□□□□□ -1.15
SEC61A1-206ENST00000491668 SERTAD4-AS1Q5TG53 156 aa7.89□□□□□ -1.15
SEC61A1-206ENST00000491668 TTTY13Q9BZ97 58 aa7.89□□□□□ -1.15
SEC61A1-206ENST00000491668 XAGE1AQ9HD64 81 aa7.89□□□□□ -1.15
SEC61A1-206ENST00000491668 A0A1W2PNN7 141 aa7.88□□□□□ -1.15
SEC61A1-206ENST00000491668 SPATA45Q537H7 98 aa7.88□□□□□ -1.15
SEC61A1-206ENST00000491668 A0A0J9YXY3 114 aa7.87□□□□□ -1.15
SEC61A1-206ENST00000491668 PCP2Q8IVA1 136 aa7.87□□□□□ -1.15
SEC61A1-206ENST00000491668 S100A12P80511 92 aa7.86□□□□□ -1.15
SEC61A1-206ENST00000491668 MIR7-3HGQ8N6C7 128 aa7.86□□□□□ -1.15
SEC61A1-206ENST00000491668 SRSF9Q13242 221 aaKnown RBP eCLIP7.85□□□□□ -1.15
SEC61A1-206ENST00000491668 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
SEC61A1-206ENST00000491668 MIEN1Q9BRT3 115 aa7.85□□□□□ -1.15
SEC61A1-206ENST00000491668 SND1-IT1Q9HBX3 110 aa7.85□□□□□ -1.15
SEC61A1-206ENST00000491668 TMEM238C9JI98 176 aa7.84□□□□□ -1.15
SEC61A1-206ENST00000491668 C9orf129Q5T035 196 aaKnown RBP7.84□□□□□ -1.15
SEC61A1-206ENST00000491668 DAND5Q8N907 189 aa7.84□□□□□ -1.15
SEC61A1-206ENST00000491668 TIMM17BO60830 172 aa7.83□□□□□ -1.16
SEC61A1-206ENST00000491668 C14orf144Q96I85 54 aa7.83□□□□□ -1.16
SEC61A1-206ENST00000491668 FAM168BA1KXE4 195 aa7.82□□□□□ -1.16
SEC61A1-206ENST00000491668 COX8AP10176 69 aa7.82□□□□□ -1.16
SEC61A1-206ENST00000491668 NPC2P61916 151 aa7.82□□□□□ -1.16
SEC61A1-206ENST00000491668 RPL24P83731 157 aaKnown RBP7.82□□□□□ -1.16
SEC61A1-206ENST00000491668 NKAPP1Q8N9T2 125 aa7.82□□□□□ -1.16
SEC61A1-206ENST00000491668 LINC01600Q96MT4 127 aa7.82□□□□□ -1.16
SEC61A1-206ENST00000491668 PLA2G2DQ9UNK4 145 aa7.82□□□□□ -1.16
SEC61A1-206ENST00000491668 LOC105371267A0A1B0GV96 52 aa7.81□□□□□ -1.16
SEC61A1-206ENST00000491668 SMIM6P0DI80 62 aa7.81□□□□□ -1.16
SEC61A1-206ENST00000491668 SLC25A34Q6PIV7 304 aa7.81□□□□□ -1.16
SEC61A1-206ENST00000491668 KRTAP7-1Q8IUC3 87 aa7.81□□□□□ -1.16
SEC61A1-206ENST00000491668 BOD1L2Q8IYS8 172 aa7.81□□□□□ -1.16
SEC61A1-206ENST00000491668 M0QXV9 152 aa7.8□□□□□ -1.16
SEC61A1-206ENST00000491668 ADAMTSL4-AS1Q5T5F5 129 aa7.8□□□□□ -1.16
SEC61A1-206ENST00000491668 SPINK6Q6UWN8 80 aa7.8□□□□□ -1.16
SEC61A1-206ENST00000491668 PHF5AQ7RTV0 110 aaKnown RBP7.8□□□□□ -1.16
SEC61A1-206ENST00000491668 KRTAP11-1Q8IUC1 163 aa7.8□□□□□ -1.16
SEC61A1-206ENST00000491668 COPS9Q8WXC6 57 aa7.8□□□□□ -1.16
SEC61A1-206ENST00000491668 LITAFQ99732 161 aa7.79□□□□□ -1.16
SEC61A1-206ENST00000491668 PSORS1C2Q9UIG4 136 aa7.79□□□□□ -1.16
SEC61A1-206ENST00000491668 DLEU1O43261 78 aa7.78□□□□□ -1.16
SEC61A1-206ENST00000491668 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
SEC61A1-206ENST00000491668 UBE2BP63146 152 aa7.78□□□□□ -1.16
SEC61A1-206ENST00000491668 LBHQ53QV2 105 aaPredicted RBP7.78□□□□□ -1.16
SEC61A1-206ENST00000491668 Q6ZVH6 145 aa7.78□□□□□ -1.16
SEC61A1-206ENST00000491668 SPANXDQ9BXN6 97 aa7.78□□□□□ -1.16
SEC61A1-206ENST00000491668 SPANXCQ9NY87 97 aa7.78□□□□□ -1.16
SEC61A1-206ENST00000491668 C22orf24Q9Y442 160 aa7.78□□□□□ -1.16
SEC61A1-206ENST00000491668 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.17
SEC61A1-206ENST00000491668 LINC00308Q8TCZ7 52 aa7.77□□□□□ -1.17
SEC61A1-206ENST00000491668 TP73-AS1Q9UF72 201 aa7.77□□□□□ -1.17
SEC61A1-206ENST00000491668 LRP2P98164 4655 aa7.77□□□□□ -1.17
SEC61A1-206ENST00000491668 GAGE10A6NGK3 116 aa7.76□□□□□ -1.17
SEC61A1-206ENST00000491668 VPREB1P12018 145 aa7.76□□□□□ -1.17
SEC61A1-206ENST00000491668 IFITM1P13164 125 aa7.76□□□□□ -1.17
SEC61A1-206ENST00000491668 MRPL55Q7Z7F7 128 aaKnown RBP7.76□□□□□ -1.17
SEC61A1-206ENST00000491668 HIST1H4GQ99525 98 aa7.76□□□□□ -1.17
SEC61A1-206ENST00000491668 IGLV5-37A0A075B6J1 123 aa7.75□□□□□ -1.17
SEC61A1-206ENST00000491668 NCR3O14931 201 aa7.75□□□□□ -1.17
SEC61A1-206ENST00000491668 LOC107984156A0A0G2JMH3 177 aa7.74□□□□□ -1.17
SEC61A1-206ENST00000491668 M0R378 163 aa7.74□□□□□ -1.17
SEC61A1-206ENST00000491668 SOSTDC1Q6X4U4 206 aa7.74□□□□□ -1.17
SEC61A1-206ENST00000491668 MUSTN1Q8IVN3 82 aa7.74□□□□□ -1.17
SEC61A1-206ENST00000491668 ARL17AQ8IVW1 177 aa7.74□□□□□ -1.17
SEC61A1-206ENST00000491668 SPANXB1Q9NS25 103 aaPredicted RBP7.74□□□□□ -1.17
SEC61A1-206ENST00000491668 UQCR10Q9UDW1 63 aa7.74□□□□□ -1.17
SEC61A1-206ENST00000491668 RPL37AP8A6NKH3 93 aa7.73□□□□□ -1.17
SEC61A1-206ENST00000491668 NDUFC2O95298 119 aa7.73□□□□□ -1.17
SEC61A1-206ENST00000491668 C1orf137Q5JT78 98 aa7.73□□□□□ -1.17
SEC61A1-206ENST00000491668 REG3GQ6UW15 175 aa7.73□□□□□ -1.17
SEC61A1-206ENST00000491668 LINC00167Q96N53 147 aa7.73□□□□□ -1.17
SEC61A1-206ENST00000491668 C12orf57Q99622 126 aa7.73□□□□□ -1.17
SEC61A1-206ENST00000491668 EIF4EBP3O60516 100 aaPredicted RBP7.72□□□□□ -1.17
SEC61A1-206ENST00000491668 S100A7L2Q5SY68 101 aa7.72□□□□□ -1.17
SEC61A1-206ENST00000491668 Q8NDZ9 215 aa7.72□□□□□ -1.17
SEC61A1-206ENST00000491668 PRO1933Q9H354 126 aa7.72□□□□□ -1.17
SEC61A1-206ENST00000491668 HIGD1BQ9P298 99 aa7.72□□□□□ -1.17
SEC61A1-206ENST00000491668 IGKV2-28A0A075B6P5 120 aa7.71□□□□□ -1.18
SEC61A1-206ENST00000491668 IGKV2D-28P01615 120 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms