RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 PMVKQ15126 192 aa6.83□□□□□ -1.32
FDPS-215ENST00000490140 CBLN2Q8IUK8 224 aa6.83□□□□□ -1.32
FDPS-215ENST00000490140 TMEM126AQ9H061 195 aa6.83□□□□□ -1.32
FDPS-215ENST00000490140 CST9LQ9H4G1 147 aa6.83□□□□□ -1.32
FDPS-215ENST00000490140 CHTOPQ9Y3Y2 248 aaKnown RBP6.83□□□□□ -1.32
FDPS-215ENST00000490140 PFN2P35080 140 aa6.82□□□□□ -1.32
FDPS-215ENST00000490140 C4orf48Q5BLP8 95 aa6.81□□□□□ -1.32
FDPS-215ENST00000490140 FP248Q71RG6 208 aaPredicted RBP6.81□□□□□ -1.32
FDPS-215ENST00000490140 PPDPFQ9H3Y8 114 aa6.81□□□□□ -1.32
FDPS-215ENST00000490140 ZNF706Q9Y5V0 76 aaPredicted RBP6.81□□□□□ -1.32
FDPS-215ENST00000490140 PCP4P48539 62 aa6.8□□□□□ -1.32
FDPS-215ENST00000490140 FA2HQ7L5A8 372 aa6.8□□□□□ -1.32
FDPS-215ENST00000490140 C12orf57Q99622 126 aa6.8□□□□□ -1.32
FDPS-215ENST00000490140 ERG28Q9UKR5 140 aa6.8□□□□□ -1.32
FDPS-215ENST00000490140 LINC01546A6NGU7 62 aa6.79□□□□□ -1.32
FDPS-215ENST00000490140 VPREB1P12018 145 aa6.79□□□□□ -1.32
FDPS-215ENST00000490140 KIAA1644Q3SXP7 199 aa6.79□□□□□ -1.32
FDPS-215ENST00000490140 COX19Q49B96 90 aa6.79□□□□□ -1.32
FDPS-215ENST00000490140 LINC00337Q8N6G1 96 aa6.79□□□□□ -1.32
FDPS-215ENST00000490140 SND1-IT1Q9HBX3 110 aa6.79□□□□□ -1.32
FDPS-215ENST00000490140 IGLV5-39A0A0G2JS06 123 aa6.78□□□□□ -1.32
FDPS-215ENST00000490140 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
FDPS-215ENST00000490140 COLCA2A8K830 154 aa6.78□□□□□ -1.32
FDPS-215ENST00000490140 TMEM238C9JI98 176 aa6.78□□□□□ -1.32
FDPS-215ENST00000490140 PLEKHB2Q96CS7 222 aa6.78□□□□□ -1.32
FDPS-215ENST00000490140 HIGD2AQ9BW72 106 aa6.78□□□□□ -1.32
FDPS-215ENST00000490140 M0R378 163 aa6.77□□□□□ -1.33
FDPS-215ENST00000490140 IGLC3P0DOY3 106 aa6.77□□□□□ -1.33
FDPS-215ENST00000490140 NDUFA12Q9UI09 145 aa6.77□□□□□ -1.33
FDPS-215ENST00000490140 SMIM6P0DI80 62 aa6.76□□□□□ -1.33
FDPS-215ENST00000490140 NDUFA6P56556 154 aa6.76□□□□□ -1.33
FDPS-215ENST00000490140 YPEL4Q96NS1 127 aa6.76□□□□□ -1.33
FDPS-215ENST00000490140 C3orf22Q8N5N4 141 aa6.75□□□□□ -1.33
FDPS-215ENST00000490140 MUC17Q685J3 4493 aa6.75□□□□□ -1.33
FDPS-215ENST00000490140 FAM19A2Q8N3H0 131 aa6.74□□□□□ -1.33
FDPS-215ENST00000490140 SPRR4Q96PI1 79 aa6.74□□□□□ -1.33
FDPS-215ENST00000490140 HSBP1L1C9JCN9 74 aa6.73□□□□□ -1.33
FDPS-215ENST00000490140 SPINK1P00995 79 aa6.73□□□□□ -1.33
FDPS-215ENST00000490140 ZNF22P17026 224 aaPredicted RBP6.73□□□□□ -1.33
FDPS-215ENST00000490140 LINC01547P58512 204 aaPredicted RBP6.73□□□□□ -1.33
FDPS-215ENST00000490140 LINC00587B1AMM8 73 aa6.72□□□□□ -1.33
FDPS-215ENST00000490140 PRYO14603 147 aa6.72□□□□□ -1.33
FDPS-215ENST00000490140 LINC00158P58513 81 aa6.72□□□□□ -1.33
FDPS-215ENST00000490140 SEC61BP60468 96 aaKnown RBP6.72□□□□□ -1.33
FDPS-215ENST00000490140 TMEM170BQ5T4T1 132 aa6.72□□□□□ -1.33
FDPS-215ENST00000490140 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
FDPS-215ENST00000490140 HBDP02042 147 aa6.71□□□□□ -1.34
FDPS-215ENST00000490140 AKR1D1P51857 326 aa6.71□□□□□ -1.34
FDPS-215ENST00000490140 FABP9Q0Z7S8 132 aa6.71□□□□□ -1.34
FDPS-215ENST00000490140 ASB16-AS1Q495Z4 193 aa6.71□□□□□ -1.34
FDPS-215ENST00000490140 Q8NBF4 154 aa6.7□□□□□ -1.34
FDPS-215ENST00000490140 ETDCA0A1B0GVM5 59 aa6.69□□□□□ -1.34
FDPS-215ENST00000490140 KRTAP13-3Q3SY46 172 aa6.69□□□□□ -1.34
FDPS-215ENST00000490140 DAND5Q8N907 189 aa6.69□□□□□ -1.34
FDPS-215ENST00000490140 TRAPPC1Q9Y5R8 145 aa6.69□□□□□ -1.34
FDPS-215ENST00000490140 TRGC2P03986 189 aa6.68□□□□□ -1.34
FDPS-215ENST00000490140 RPS29P62273 56 aaKnown RBP6.68□□□□□ -1.34
FDPS-215ENST00000490140 BAGE3Q86Y29 109 aa6.68□□□□□ -1.34
FDPS-215ENST00000490140 C11orf86A6NJI1 115 aa6.67□□□□□ -1.34
FDPS-215ENST00000490140 LINC00614P0C842 121 aa6.67□□□□□ -1.34
FDPS-215ENST00000490140 MEIG1Q5JSS6 88 aa6.67□□□□□ -1.34
FDPS-215ENST00000490140 BOD1L2Q8IYS8 172 aa6.67□□□□□ -1.34
FDPS-215ENST00000490140 HERV-K104P63124 156 aa6.66□□□□□ -1.34
FDPS-215ENST00000490140 Q8NDZ9 215 aa6.66□□□□□ -1.34
FDPS-215ENST00000490140 MAP1LC3CQ9BXW4 147 aa6.66□□□□□ -1.34
FDPS-215ENST00000490140 KCNQ1DNQ9H478 68 aa6.66□□□□□ -1.34
FDPS-215ENST00000490140 A0A096LNJ9 63 aa6.65□□□□□ -1.34
FDPS-215ENST00000490140 A0A0U1RRA0 63 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 NCR3O14931 201 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 SLC25A20O43772 301 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 HIST1H2BKO60814 126 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 HIST1H2BJP06899 126 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 HIST1H2BOP23527 126 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 HIST1H2BBP33778 126 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 SPRR1AP35321 89 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 HIST1H2BDP58876 126 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 HIST1H2BCP62807 126 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 HIST2H2BEQ16778 126 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 LINC00483Q53H64 154 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.64□□□□□ -1.35
FDPS-215ENST00000490140 C18orf32Q8TCD1 76 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 SMCR5Q8TEV8 140 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 HIST1H2BHQ93079 126 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 HIST1H2BNQ99877 126 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 HIST1H2BMQ99879 126 aa6.64□□□□□ -1.35
FDPS-215ENST00000490140 SSBP3-AS1Q7Z2R9 100 aa6.63□□□□□ -1.35
FDPS-215ENST00000490140 IGLV9-49A0A0B4J1Y8 123 aa6.62□□□□□ -1.35
FDPS-215ENST00000490140 TMEM223A0PJW6 202 aa6.62□□□□□ -1.35
FDPS-215ENST00000490140 SMIM13P0DJ93 91 aa6.62□□□□□ -1.35
FDPS-215ENST00000490140 MOBPQ13875 183 aa6.62□□□□□ -1.35
FDPS-215ENST00000490140 PMCHL1Q16048 86 aa6.62□□□□□ -1.35
FDPS-215ENST00000490140 COA6Q5JTJ3 125 aaKnown RBP6.62□□□□□ -1.35
FDPS-215ENST00000490140 GAGE2AQ6NT46 116 aa6.62□□□□□ -1.35
FDPS-215ENST00000490140 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
FDPS-215ENST00000490140 TRAV12-1A0A0B4J245 112 aa6.61□□□□□ -1.35
FDPS-215ENST00000490140 MYMXA0A1B0GTQ4 84 aa6.61□□□□□ -1.35
FDPS-215ENST00000490140 C5orf52A6NGY3 159 aa6.61□□□□□ -1.35
FDPS-215ENST00000490140 S100A2P29034 98 aa6.61□□□□□ -1.35
FDPS-215ENST00000490140 SNRPEP62304 92 aaKnown RBP6.61□□□□□ -1.35
FDPS-215ENST00000490140 TRBV10-3A0A0K0K1G6 114 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms