RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 LITAFQ99732 161 aa7.85□□□□□ -1.15
HDAC1-210ENST00000490081 XAGE1AQ9HD64 81 aa7.85□□□□□ -1.15
HDAC1-210ENST00000490081 TP73-AS1Q9UF72 201 aa7.85□□□□□ -1.15
HDAC1-210ENST00000490081 COX8AP10176 69 aa7.84□□□□□ -1.15
HDAC1-210ENST00000490081 Q6ZVH6 145 aa7.84□□□□□ -1.15
HDAC1-210ENST00000490081 KRTAP7-1Q8IUC3 87 aa7.84□□□□□ -1.15
HDAC1-210ENST00000490081 BOD1L2Q8IYS8 172 aa7.84□□□□□ -1.15
HDAC1-210ENST00000490081 MIR7-3HGQ8N6C7 128 aa7.84□□□□□ -1.15
HDAC1-210ENST00000490081 VAMP8Q9BV40 100 aa7.84□□□□□ -1.15
HDAC1-210ENST00000490081 TTTY13Q9BZ97 58 aa7.84□□□□□ -1.15
HDAC1-210ENST00000490081 RPL24P83731 157 aaKnown RBP7.83□□□□□ -1.16
HDAC1-210ENST00000490081 ADAMTSL4-AS1Q5T5F5 129 aa7.83□□□□□ -1.16
HDAC1-210ENST00000490081 Q8N1X5 172 aa7.83□□□□□ -1.16
HDAC1-210ENST00000490081 TMEM238C9JI98 176 aa7.82□□□□□ -1.16
HDAC1-210ENST00000490081 LOC105371267A0A1B0GV96 52 aa7.81□□□□□ -1.16
HDAC1-210ENST00000490081 FAM168BA1KXE4 195 aa7.81□□□□□ -1.16
HDAC1-210ENST00000490081 SPATA45Q537H7 98 aa7.81□□□□□ -1.16
HDAC1-210ENST00000490081 SCGB1D4Q6XE38 83 aa7.81□□□□□ -1.16
HDAC1-210ENST00000490081 SPANXDQ9BXN6 97 aa7.81□□□□□ -1.16
HDAC1-210ENST00000490081 SPANXCQ9NY87 97 aa7.81□□□□□ -1.16
HDAC1-210ENST00000490081 PAM16Q9Y3D7 125 aa7.81□□□□□ -1.16
HDAC1-210ENST00000490081 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
HDAC1-210ENST00000490081 A0A0U1RRA0 63 aa7.8□□□□□ -1.16
HDAC1-210ENST00000490081 NDUFC2O95298 119 aa7.8□□□□□ -1.16
HDAC1-210ENST00000490081 VPREB1P12018 145 aa7.8□□□□□ -1.16
HDAC1-210ENST00000490081 IFITM1P13164 125 aa7.8□□□□□ -1.16
HDAC1-210ENST00000490081 LBHQ53QV2 105 aaPredicted RBP7.8□□□□□ -1.16
HDAC1-210ENST00000490081 SERTAD4-AS1Q5TG53 156 aa7.8□□□□□ -1.16
HDAC1-210ENST00000490081 COPS9Q8WXC6 57 aa7.8□□□□□ -1.16
HDAC1-210ENST00000490081 SPANXB1Q9NS25 103 aaPredicted RBP7.8□□□□□ -1.16
HDAC1-210ENST00000490081 C7orf33Q8WU49 177 aa7.79□□□□□ -1.16
HDAC1-210ENST00000490081 TRBV10-2A0A0K0K1G8 114 aa7.78□□□□□ -1.16
HDAC1-210ENST00000490081 FAM229AH3BQW9 127 aa7.78□□□□□ -1.16
HDAC1-210ENST00000490081 M0QXV9 152 aa7.78□□□□□ -1.16
HDAC1-210ENST00000490081 SMIM6P0DI80 62 aa7.78□□□□□ -1.16
HDAC1-210ENST00000490081 S100A12P80511 92 aa7.78□□□□□ -1.16
HDAC1-210ENST00000490081 HAMPP81172 84 aa7.78□□□□□ -1.16
HDAC1-210ENST00000490081 FAM19A5Q7Z5A7 132 aaPredicted RBP7.78□□□□□ -1.16
HDAC1-210ENST00000490081 MRPL55Q7Z7F7 128 aaKnown RBP7.78□□□□□ -1.16
HDAC1-210ENST00000490081 LINC00308Q8TCZ7 52 aa7.78□□□□□ -1.16
HDAC1-210ENST00000490081 MIEN1Q9BRT3 115 aa7.78□□□□□ -1.16
HDAC1-210ENST00000490081 HIGD1BQ9P298 99 aa7.78□□□□□ -1.16
HDAC1-210ENST00000490081 SLC25A34Q6PIV7 304 aa7.77□□□□□ -1.17
HDAC1-210ENST00000490081 SOSTDC1Q6X4U4 206 aa7.77□□□□□ -1.17
HDAC1-210ENST00000490081 LINC00528Q8N1L1 170 aa7.77□□□□□ -1.17
HDAC1-210ENST00000490081 DAND5Q8N907 189 aa7.77□□□□□ -1.17
HDAC1-210ENST00000490081 FAT1Q14517 4588 aa7.77□□□□□ -1.17
HDAC1-210ENST00000490081 M0R378 163 aa7.76□□□□□ -1.17
HDAC1-210ENST00000490081 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
HDAC1-210ENST00000490081 PHF5AQ7RTV0 110 aaKnown RBP7.76□□□□□ -1.17
HDAC1-210ENST00000490081 NKAPP1Q8N9T2 125 aa7.76□□□□□ -1.17
HDAC1-210ENST00000490081 Q8NDZ9 215 aa7.76□□□□□ -1.17
HDAC1-210ENST00000490081 C14orf144Q96I85 54 aa7.76□□□□□ -1.17
HDAC1-210ENST00000490081 EIF4EBP3O60516 100 aaPredicted RBP7.75□□□□□ -1.17
HDAC1-210ENST00000490081 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
HDAC1-210ENST00000490081 LINC00167Q96N53 147 aa7.75□□□□□ -1.17
HDAC1-210ENST00000490081 VPS13BQ7Z7G8 4022 aa7.75□□□□□ -1.17
HDAC1-210ENST00000490081 KRTAP10-4P60372 401 aaPredicted RBP7.74□□□□□ -1.17
HDAC1-210ENST00000490081 LINC00518Q8N0U6 118 aa7.74□□□□□ -1.17
HDAC1-210ENST00000490081 IGLV1-50A0A075B6I6 118 aa7.73□□□□□ -1.17
HDAC1-210ENST00000490081 SRSF9Q13242 221 aaKnown RBP eCLIP7.73□□□□□ -1.17
HDAC1-210ENST00000490081 SRRM2Q9UQ35 2752 aaKnown RBP7.72□□□□□ -1.17
HDAC1-210ENST00000490081 RPL37AP61513 92 aaKnown RBP7.72□□□□□ -1.17
HDAC1-210ENST00000490081 TAL2Q16559 108 aa7.72□□□□□ -1.17
HDAC1-210ENST00000490081 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
HDAC1-210ENST00000490081 Q5VSD8 79 aa7.72□□□□□ -1.17
HDAC1-210ENST00000490081 C2orf91Q6ZV80 131 aa7.72□□□□□ -1.17
HDAC1-210ENST00000490081 MUSTN1Q8IVN3 82 aa7.72□□□□□ -1.17
HDAC1-210ENST00000490081 UBE2BP63146 152 aa7.71□□□□□ -1.18
HDAC1-210ENST00000490081 PRR3P79522 188 aaKnown RBP7.71□□□□□ -1.18
HDAC1-210ENST00000490081 KRTAP11-1Q8IUC1 163 aa7.71□□□□□ -1.18
HDAC1-210ENST00000490081 UQCR10Q9UDW1 63 aa7.71□□□□□ -1.18
HDAC1-210ENST00000490081 PSORS1C2Q9UIG4 136 aa7.71□□□□□ -1.18
HDAC1-210ENST00000490081 KCNQ1DNQ9H478 68 aa7.7□□□□□ -1.18
HDAC1-210ENST00000490081 CBY1Q9Y3M2 126 aa7.7□□□□□ -1.18
HDAC1-210ENST00000490081 IGKV2-28A0A075B6P5 120 aa7.69□□□□□ -1.18
HDAC1-210ENST00000490081 IGKV2D-28P01615 120 aa7.69□□□□□ -1.18
HDAC1-210ENST00000490081 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
HDAC1-210ENST00000490081 NPC2P61916 151 aa7.69□□□□□ -1.18
HDAC1-210ENST00000490081 HIST1H4GQ99525 98 aa7.69□□□□□ -1.18
HDAC1-210ENST00000490081 TMEM126AQ9H061 195 aa7.68□□□□□ -1.18
HDAC1-210ENST00000490081 GAGE10A6NGK3 116 aa7.67□□□□□ -1.18
HDAC1-210ENST00000490081 RPL37AP8A6NKH3 93 aa7.67□□□□□ -1.18
HDAC1-210ENST00000490081 PRYO14603 147 aa7.67□□□□□ -1.18
HDAC1-210ENST00000490081 NCR3O14931 201 aa7.67□□□□□ -1.18
HDAC1-210ENST00000490081 DDTP30046 118 aa7.67□□□□□ -1.18
HDAC1-210ENST00000490081 SPRR1AP35321 89 aa7.67□□□□□ -1.18
HDAC1-210ENST00000490081 TRBV10-3A0A0K0K1G6 114 aa7.66□□□□□ -1.18
HDAC1-210ENST00000490081 BCE1O60756 84 aa7.66□□□□□ -1.18
HDAC1-210ENST00000490081 C1orf137Q5JT78 98 aa7.66□□□□□ -1.18
HDAC1-210ENST00000490081 S100A7L2Q5SY68 101 aa7.66□□□□□ -1.18
HDAC1-210ENST00000490081 REG3GQ6UW15 175 aa7.66□□□□□ -1.18
HDAC1-210ENST00000490081 TRAV13-2A0A0B4J235 113 aa7.65□□□□□ -1.18
HDAC1-210ENST00000490081 A4D1N5 150 aa7.65□□□□□ -1.18
HDAC1-210ENST00000490081 H0Y9J4 135 aa7.65□□□□□ -1.18
HDAC1-210ENST00000490081 IGLV7-43P04211 117 aa7.65□□□□□ -1.18
HDAC1-210ENST00000490081 LINC00337Q8N6G1 96 aa7.65□□□□□ -1.18
HDAC1-210ENST00000490081 C12orf57Q99622 126 aa7.65□□□□□ -1.18
HDAC1-210ENST00000490081 HERC1Q15751 4861 aa7.64□□□□□ -1.19
HDAC1-210ENST00000490081 KRTAP4-16G5E9R7 235 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms