RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ARL17AQ8IVW1 177 aa10.85□□□□□ -0.67
ERCC3-207ENST00000490062 ANKRD39Q53RE8 183 aa10.84□□□□□ -0.67
ERCC3-207ENST00000490062 PHF5AQ7RTV0 110 aaKnown RBP10.84□□□□□ -0.67
ERCC3-207ENST00000490062 C22orf24Q9Y442 160 aa10.84□□□□□ -0.67
ERCC3-207ENST00000490062 A0A0J9YXY3 114 aa10.83□□□□□ -0.68
ERCC3-207ENST00000490062 ATOH7Q8N100 152 aa10.83□□□□□ -0.68
ERCC3-207ENST00000490062 MIR7-3HGQ8N6C7 128 aa10.83□□□□□ -0.68
ERCC3-207ENST00000490062 TIMM17BO60830 172 aa10.82□□□□□ -0.68
ERCC3-207ENST00000490062 VPREB1P12018 145 aa10.82□□□□□ -0.68
ERCC3-207ENST00000490062 PRR3P79522 188 aaKnown RBP10.82□□□□□ -0.68
ERCC3-207ENST00000490062 LBHQ53QV2 105 aaPredicted RBP10.82□□□□□ -0.68
ERCC3-207ENST00000490062 SRRM2Q9UQ35 2752 aaKnown RBP10.82□□□□□ -0.68
ERCC3-207ENST00000490062 RPL24P83731 157 aaKnown RBP10.81□□□□□ -0.68
ERCC3-207ENST00000490062 PCLOQ9Y6V0 5065 aa10.8□□□□□ -0.68
ERCC3-207ENST00000490062 ZNF815PA8K554 130 aa10.8□□□□□ -0.68
ERCC3-207ENST00000490062 MRPL55Q7Z7F7 128 aaKnown RBP10.8□□□□□ -0.68
ERCC3-207ENST00000490062 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
ERCC3-207ENST00000490062 LITAFQ99732 161 aa10.79□□□□□ -0.68
ERCC3-207ENST00000490062 SCGB1D1O95968 90 aa10.78□□□□□ -0.68
ERCC3-207ENST00000490062 JOSD1Q15040 202 aaPredicted RBP10.78□□□□□ -0.68
ERCC3-207ENST00000490062 KRTAP11-1Q8IUC1 163 aa10.78□□□□□ -0.68
ERCC3-207ENST00000490062 Q8NDZ9 215 aa10.78□□□□□ -0.68
ERCC3-207ENST00000490062 TTTY13Q9BZ97 58 aa10.78□□□□□ -0.68
ERCC3-207ENST00000490062 PSORS1C2Q9UIG4 136 aa10.78□□□□□ -0.68
ERCC3-207ENST00000490062 HSBP1L1C9JCN9 74 aa10.77□□□□□ -0.69
ERCC3-207ENST00000490062 NKAPP1Q8N9T2 125 aa10.77□□□□□ -0.69
ERCC3-207ENST00000490062 INAFM2P0DMQ5 153 aa10.76□□□□□ -0.69
ERCC3-207ENST00000490062 ADAMTSL4-AS1Q5T5F5 129 aa10.76□□□□□ -0.69
ERCC3-207ENST00000490062 LINC00167Q96N53 147 aa10.76□□□□□ -0.69
ERCC3-207ENST00000490062 TMA7Q9Y2S6 64 aaKnown RBP10.76□□□□□ -0.69
ERCC3-207ENST00000490062 PKHD1L1Q86WI1 4243 aa10.76□□□□□ -0.69
ERCC3-207ENST00000490062 UBE2BP63146 152 aa10.75□□□□□ -0.69
ERCC3-207ENST00000490062 PPDPFQ9H3Y8 114 aa10.75□□□□□ -0.69
ERCC3-207ENST00000490062 NDUFC2O95298 119 aa10.74□□□□□ -0.69
ERCC3-207ENST00000490062 PCP2Q8IVA1 136 aa10.74□□□□□ -0.69
ERCC3-207ENST00000490062 BOD1L2Q8IYS8 172 aa10.74□□□□□ -0.69
ERCC3-207ENST00000490062 HNRNPA3P51991 378 aaKnown RBP10.73□□□□□ -0.69
ERCC3-207ENST00000490062 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.69
ERCC3-207ENST00000490062 DAND5Q8N907 189 aa10.73□□□□□ -0.69
ERCC3-207ENST00000490062 M0R378 163 aa10.72□□□□□ -0.69
ERCC3-207ENST00000490062 SOSTDC1Q6X4U4 206 aa10.72□□□□□ -0.69
ERCC3-207ENST00000490062 Q6ZVH6 145 aa10.72□□□□□ -0.69
ERCC3-207ENST00000490062 SPANXDQ9BXN6 97 aa10.72□□□□□ -0.69
ERCC3-207ENST00000490062 SPANXCQ9NY87 97 aa10.72□□□□□ -0.69
ERCC3-207ENST00000490062 IGLV1-50A0A075B6I6 118 aa10.71□□□□□ -0.69
ERCC3-207ENST00000490062 TRBV10-2A0A0K0K1G8 114 aa10.71□□□□□ -0.69
ERCC3-207ENST00000490062 TMEM238C9JI98 176 aa10.71□□□□□ -0.69
ERCC3-207ENST00000490062 MIEN1Q9BRT3 115 aa10.71□□□□□ -0.69
ERCC3-207ENST00000490062 C1orf137Q5JT78 98 aa10.7□□□□□ -0.7
ERCC3-207ENST00000490062 SCGB1D4Q6XE38 83 aa10.7□□□□□ -0.7
ERCC3-207ENST00000490062 LINC00308Q8TCZ7 52 aa10.7□□□□□ -0.7
ERCC3-207ENST00000490062 IGLV7-43P04211 117 aa10.69□□□□□ -0.7
ERCC3-207ENST00000490062 SPINK6Q6UWN8 80 aa10.69□□□□□ -0.7
ERCC3-207ENST00000490062 FLG2Q5D862 2391 aaPredicted RBP10.69□□□□□ -0.7
ERCC3-207ENST00000490062 DLEU1O43261 78 aa10.68□□□□□ -0.7
ERCC3-207ENST00000490062 EIF4EBP3O60516 100 aaPredicted RBP10.68□□□□□ -0.7
ERCC3-207ENST00000490062 PYY3Q5JQD4 70 aa10.68□□□□□ -0.7
ERCC3-207ENST00000490062 SPANXB1Q9NS25 103 aaPredicted RBP10.68□□□□□ -0.7
ERCC3-207ENST00000490062 GAGE10A6NGK3 116 aa10.67□□□□□ -0.7
ERCC3-207ENST00000490062 RPL37AP8A6NKH3 93 aa10.67□□□□□ -0.7
ERCC3-207ENST00000490062 COX8AP10176 69 aa10.67□□□□□ -0.7
ERCC3-207ENST00000490062 IFITM1P13164 125 aa10.67□□□□□ -0.7
ERCC3-207ENST00000490062 MYCBP2O75592 4640 aa10.67□□□□□ -0.7
ERCC3-207ENST00000490062 BCE1O60756 84 aa10.66□□□□□ -0.7
ERCC3-207ENST00000490062 COPS9Q8WXC6 57 aa10.66□□□□□ -0.7
ERCC3-207ENST00000490062 VAMP8Q9BV40 100 aa10.65□□□□□ -0.7
ERCC3-207ENST00000490062 IGKV2-28A0A075B6P5 120 aa10.64□□□□□ -0.71
ERCC3-207ENST00000490062 IGKV2D-28P01615 120 aa10.64□□□□□ -0.71
ERCC3-207ENST00000490062 KCNQ1DNQ9H478 68 aa10.64□□□□□ -0.71
ERCC3-207ENST00000490062 FAT3Q8TDW7 4589 aa10.64□□□□□ -0.71
ERCC3-207ENST00000490062 NCR3O14931 201 aa10.63□□□□□ -0.71
ERCC3-207ENST00000490062 SPATA45Q537H7 98 aa10.63□□□□□ -0.71
ERCC3-207ENST00000490062 KRTAP13-1Q8IUC0 172 aa10.63□□□□□ -0.71
ERCC3-207ENST00000490062 KRTAP29-1A8MX34 341 aaPredicted RBP10.62□□□□□ -0.71
ERCC3-207ENST00000490062 PRYO14603 147 aa10.62□□□□□ -0.71
ERCC3-207ENST00000490062 ZNF861PO60384 105 aa10.62□□□□□ -0.71
ERCC3-207ENST00000490062 IGLV6-57P01721 117 aa10.62□□□□□ -0.71
ERCC3-207ENST00000490062 SPRR1AP35321 89 aa10.62□□□□□ -0.71
ERCC3-207ENST00000490062 NPC2P61916 151 aa10.62□□□□□ -0.71
ERCC3-207ENST00000490062 REG3GQ6UW15 175 aa10.62□□□□□ -0.71
ERCC3-207ENST00000490062 TMEM126AQ9H061 195 aa10.62□□□□□ -0.71
ERCC3-207ENST00000490062 PAM16Q9Y3D7 125 aa10.62□□□□□ -0.71
ERCC3-207ENST00000490062 OXTP01178 125 aa10.61□□□□□ -0.71
ERCC3-207ENST00000490062 LRP1Q07954 4544 aaKnown RBP10.61□□□□□ -0.71
ERCC3-207ENST00000490062 TRBV10-3A0A0K0K1G6 114 aa10.6□□□□□ -0.71
ERCC3-207ENST00000490062 LINC00518Q8N0U6 118 aa10.6□□□□□ -0.71
ERCC3-207ENST00000490062 DIRC1Q969H9 104 aa10.6□□□□□ -0.71
ERCC3-207ENST00000490062 DDTP30046 118 aa10.59□□□□□ -0.71
ERCC3-207ENST00000490062 RPL28P46779 137 aaKnown RBP10.59□□□□□ -0.71
ERCC3-207ENST00000490062 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
ERCC3-207ENST00000490062 H0Y9J4 135 aa10.58□□□□□ -0.72
ERCC3-207ENST00000490062 MUSTN1Q8IVN3 82 aa10.58□□□□□ -0.72
ERCC3-207ENST00000490062 LINC00337Q8N6G1 96 aa10.58□□□□□ -0.72
ERCC3-207ENST00000490062 HIGD1BQ9P298 99 aa10.58□□□□□ -0.72
ERCC3-207ENST00000490062 S100A12P80511 92 aa10.57□□□□□ -0.72
ERCC3-207ENST00000490062 CBY1Q9Y3M2 126 aa10.57□□□□□ -0.72
ERCC3-207ENST00000490062 SLC25A34Q6PIV7 304 aa10.56□□□□□ -0.72
ERCC3-207ENST00000490062 C14orf144Q96I85 54 aa10.56□□□□□ -0.72
ERCC3-207ENST00000490062 S100A7L2Q5SY68 101 aa10.55□□□□□ -0.72
ERCC3-207ENST00000490062 UBE2AP49459 152 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms