RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 PAM16Q9Y3D7 125 aa7.07□□□□□ -1.28
SRSF4-204ENST00000489898 LINC01545Q5VT33 79 aa7.06□□□□□ -1.28
SRSF4-204ENST00000489898 XAGE1AQ9HD64 81 aa7.06□□□□□ -1.28
SRSF4-204ENST00000489898 TINCRA0A1B0GVN0 87 aa7.05□□□□□ -1.28
SRSF4-204ENST00000489898 F8VRH5 84 aa7.05□□□□□ -1.28
SRSF4-204ENST00000489898 SPATA45Q537H7 98 aa7.05□□□□□ -1.28
SRSF4-204ENST00000489898 KRTAP13-1Q8IUC0 172 aa7.05□□□□□ -1.28
SRSF4-204ENST00000489898 ATOH7Q8N100 152 aa7.05□□□□□ -1.28
SRSF4-204ENST00000489898 Q8NDZ9 215 aa7.05□□□□□ -1.28
SRSF4-204ENST00000489898 IGLV5-39A0A0G2JS06 123 aa7.04□□□□□ -1.28
SRSF4-204ENST00000489898 PLNP26678 52 aa7.04□□□□□ -1.28
SRSF4-204ENST00000489898 DIRC1Q969H9 104 aa7.04□□□□□ -1.28
SRSF4-204ENST00000489898 CST9LQ9H4G1 147 aa7.04□□□□□ -1.28
SRSF4-204ENST00000489898 TOMM7Q9P0U1 55 aa7.04□□□□□ -1.28
SRSF4-204ENST00000489898 C22orf24Q9Y442 160 aa7.04□□□□□ -1.28
SRSF4-204ENST00000489898 TRAV12-1A0A0B4J245 112 aa7.03□□□□□ -1.28
SRSF4-204ENST00000489898 DPM2O94777 84 aa7.03□□□□□ -1.28
SRSF4-204ENST00000489898 PMCHL2Q9BQD1 86 aa7.03□□□□□ -1.28
SRSF4-204ENST00000489898 PRO1933Q9H354 126 aa7.03□□□□□ -1.28
SRSF4-204ENST00000489898 TP73-AS1Q9UF72 201 aa7.03□□□□□ -1.28
SRSF4-204ENST00000489898 IGLV5-37A0A075B6J1 123 aa7.02□□□□□ -1.29
SRSF4-204ENST00000489898 IGKCP01834 107 aa7.02□□□□□ -1.29
SRSF4-204ENST00000489898 IGLC3P0DOY3 106 aa7.02□□□□□ -1.29
SRSF4-204ENST00000489898 CHTOPQ9Y3Y2 248 aaKnown RBP7.02□□□□□ -1.29
SRSF4-204ENST00000489898 A0A087X002 238 aa7.01□□□□□ -1.29
SRSF4-204ENST00000489898 SPINK8P0C7L1 97 aa7.01□□□□□ -1.29
SRSF4-204ENST00000489898 ZNF22P17026 224 aaPredicted RBP7.01□□□□□ -1.29
SRSF4-204ENST00000489898 CXCL5P42830 114 aa7.01□□□□□ -1.29
SRSF4-204ENST00000489898 SEC11AP67812 179 aa7.01□□□□□ -1.29
SRSF4-204ENST00000489898 PMVKQ15126 192 aa7.01□□□□□ -1.29
SRSF4-204ENST00000489898 COX7B2Q8TF08 81 aa7.01□□□□□ -1.29
SRSF4-204ENST00000489898 IGLV1-50A0A075B6I6 118 aa7□□□□□ -1.29
SRSF4-204ENST00000489898 ZNF861PO60384 105 aa7□□□□□ -1.29
SRSF4-204ENST00000489898 CKS1BP61024 79 aa7□□□□□ -1.29
SRSF4-204ENST00000489898 HERVK_113P61574 105 aa7□□□□□ -1.29
SRSF4-204ENST00000489898 C6orf226Q5I0X4 101 aa7□□□□□ -1.29
SRSF4-204ENST00000489898 GEMIN7Q9H840 131 aaKnown RBP7□□□□□ -1.29
SRSF4-204ENST00000489898 UQCR10Q9UDW1 63 aa7□□□□□ -1.29
SRSF4-204ENST00000489898 PRSS2P07478 247 aa6.99□□□□□ -1.29
SRSF4-204ENST00000489898 DDTP30046 118 aa6.99□□□□□ -1.29
SRSF4-204ENST00000489898 UBE2BP63146 152 aa6.99□□□□□ -1.29
SRSF4-204ENST00000489898 MRPL55Q7Z7F7 128 aaKnown RBP6.99□□□□□ -1.29
SRSF4-204ENST00000489898 LINC00167Q96N53 147 aa6.98□□□□□ -1.29
SRSF4-204ENST00000489898 C11orf86A6NJI1 115 aa6.97□□□□□ -1.29
SRSF4-204ENST00000489898 KRTAP13-2Q52LG2 175 aa6.97□□□□□ -1.29
SRSF4-204ENST00000489898 SLC25A34Q6PIV7 304 aa6.97□□□□□ -1.29
SRSF4-204ENST00000489898 MIEN1Q9BRT3 115 aa6.97□□□□□ -1.29
SRSF4-204ENST00000489898 BCE1O60756 84 aa6.96□□□□□ -1.3
SRSF4-204ENST00000489898 VPREB1P12018 145 aa6.96□□□□□ -1.3
SRSF4-204ENST00000489898 NMUP48645 174 aa6.96□□□□□ -1.3
SRSF4-204ENST00000489898 ZNF625Q96I27 306 aaPredicted RBP6.96□□□□□ -1.3
SRSF4-204ENST00000489898 TMEM170BQ5T4T1 132 aa6.95□□□□□ -1.3
SRSF4-204ENST00000489898 FAT4Q6V0I7 4981 aa6.95□□□□□ -1.3
SRSF4-204ENST00000489898 RPL37AP8A6NKH3 93 aa6.94□□□□□ -1.3
SRSF4-204ENST00000489898 C14orf144Q96I85 54 aa6.94□□□□□ -1.3
SRSF4-204ENST00000489898 H3BRM9 83 aa6.93□□□□□ -1.3
SRSF4-204ENST00000489898 COX8AP10176 69 aa6.93□□□□□ -1.3
SRSF4-204ENST00000489898 GAGE10A6NGK3 116 aa6.92□□□□□ -1.3
SRSF4-204ENST00000489898 LINC00587B1AMM8 73 aa6.92□□□□□ -1.3
SRSF4-204ENST00000489898 ANKRD39Q53RE8 183 aa6.92□□□□□ -1.3
SRSF4-204ENST00000489898 SND1-IT1Q9HBX3 110 aa6.92□□□□□ -1.3
SRSF4-204ENST00000489898 LBHQ53QV2 105 aaPredicted RBP6.91□□□□□ -1.3
SRSF4-204ENST00000489898 ANAPC11Q9NYG5 84 aa6.91□□□□□ -1.3
SRSF4-204ENST00000489898 ERG28Q9UKR5 140 aa6.91□□□□□ -1.3
SRSF4-204ENST00000489898 E9PLD3 99 aa6.9□□□□□ -1.3
SRSF4-204ENST00000489898 M0R378 163 aa6.9□□□□□ -1.3
SRSF4-204ENST00000489898 LCE2BO14633 110 aa6.9□□□□□ -1.3
SRSF4-204ENST00000489898 LGALS3P17931 250 aaKnown RBP6.9□□□□□ -1.3
SRSF4-204ENST00000489898 RPL13AP40429 203 aaKnown RBP6.9□□□□□ -1.3
SRSF4-204ENST00000489898 IGKV2-28A0A075B6P5 120 aa6.89□□□□□ -1.31
SRSF4-204ENST00000489898 TMEM223A0PJW6 202 aa6.89□□□□□ -1.31
SRSF4-204ENST00000489898 TMEM238C9JI98 176 aa6.89□□□□□ -1.31
SRSF4-204ENST00000489898 M0R143 59 aa6.89□□□□□ -1.31
SRSF4-204ENST00000489898 IGKV2D-28P01615 120 aa6.89□□□□□ -1.31
SRSF4-204ENST00000489898 PLEKHB2Q96CS7 222 aa6.89□□□□□ -1.31
SRSF4-204ENST00000489898 DLEU1O43261 78 aa6.88□□□□□ -1.31
SRSF4-204ENST00000489898 PFN2P35080 140 aa6.88□□□□□ -1.31
SRSF4-204ENST00000489898 RPL28P46779 137 aaKnown RBP6.88□□□□□ -1.31
SRSF4-204ENST00000489898 TSPEAR-AS2P59090 65 aa6.88□□□□□ -1.31
SRSF4-204ENST00000489898 CTAG1AP78358 180 aa6.88□□□□□ -1.31
SRSF4-204ENST00000489898 PRLHP81277 87 aa6.88□□□□□ -1.31
SRSF4-204ENST00000489898 BATFQ16520 125 aa6.88□□□□□ -1.31
SRSF4-204ENST00000489898 SCGB1D4Q6XE38 83 aa6.88□□□□□ -1.31
SRSF4-204ENST00000489898 TMEM126AQ9H061 195 aa6.88□□□□□ -1.31
SRSF4-204ENST00000489898 ZNF815PA8K554 130 aa6.87□□□□□ -1.31
SRSF4-204ENST00000489898 BOD1L2Q8IYS8 172 aa6.87□□□□□ -1.31
SRSF4-204ENST00000489898 MYMXA0A1B0GTQ4 84 aa6.86□□□□□ -1.31
SRSF4-204ENST00000489898 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
SRSF4-204ENST00000489898 LEPROTO15243 131 aa6.86□□□□□ -1.31
SRSF4-204ENST00000489898 COX17Q14061 63 aa6.86□□□□□ -1.31
SRSF4-204ENST00000489898 PCP2Q8IVA1 136 aa6.86□□□□□ -1.31
SRSF4-204ENST00000489898 IGKV2D-26A0A0A0MRZ7 120 aa6.85□□□□□ -1.31
SRSF4-204ENST00000489898 J3QQQ9 107 aa6.85□□□□□ -1.31
SRSF4-204ENST00000489898 HSD52Q0P140 79 aa6.85□□□□□ -1.31
SRSF4-204ENST00000489898 FAM229BQ4G0N7 80 aa6.85□□□□□ -1.31
SRSF4-204ENST00000489898 SPRR1AP35321 89 aa6.84□□□□□ -1.31
SRSF4-204ENST00000489898 NKAPP1Q8N9T2 125 aa6.84□□□□□ -1.31
SRSF4-204ENST00000489898 HINT1P49773 126 aaPredicted RBP6.83□□□□□ -1.32
SRSF4-204ENST00000489898 HIGD1BQ9P298 99 aa6.83□□□□□ -1.32
SRSF4-204ENST00000489898 CRYGAP11844 174 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 490.7 ms