RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 EPM2AB3EWF7 344 aa5.18□□□□□ -1.58
SF1-218ENST00000489544 SCGB1D1O95968 90 aa5.18□□□□□ -1.58
SF1-218ENST00000489544 KRTAP11-1Q8IUC1 163 aa5.18□□□□□ -1.58
SF1-218ENST00000489544 DAND5Q8N907 189 aa5.18□□□□□ -1.58
SF1-218ENST00000489544 Q8NDZ9 215 aa5.18□□□□□ -1.58
SF1-218ENST00000489544 SND1-IT1Q9HBX3 110 aa5.18□□□□□ -1.58
SF1-218ENST00000489544 A0A0J9YXY3 114 aa5.17□□□□□ -1.58
SF1-218ENST00000489544 NMUP48645 174 aa5.17□□□□□ -1.58
SF1-218ENST00000489544 HERV-K104P63124 156 aa5.17□□□□□ -1.58
SF1-218ENST00000489544 SFTA2Q6UW10 78 aa5.17□□□□□ -1.58
SF1-218ENST00000489544 MIR7-3HGQ8N6C7 128 aa5.17□□□□□ -1.58
SF1-218ENST00000489544 ZNF815PA8K554 130 aa5.16□□□□□ -1.58
SF1-218ENST00000489544 FAM229AH3BQW9 127 aa5.16□□□□□ -1.58
SF1-218ENST00000489544 M0QXV9 152 aa5.16□□□□□ -1.58
SF1-218ENST00000489544 KRTAP10-4P60372 401 aaPredicted RBP5.16□□□□□ -1.58
SF1-218ENST00000489544 COX17Q14061 63 aa5.16□□□□□ -1.58
SF1-218ENST00000489544 ADAMTSL4-AS1Q5T5F5 129 aa5.16□□□□□ -1.58
SF1-218ENST00000489544 PCP2Q8IVA1 136 aa5.16□□□□□ -1.58
SF1-218ENST00000489544 C22orf24Q9Y442 160 aa5.16□□□□□ -1.58
SF1-218ENST00000489544 VPS13BQ7Z7G8 4022 aa5.15□□□□□ -1.58
SF1-218ENST00000489544 GAGE10A6NGK3 116 aa5.15□□□□□ -1.59
SF1-218ENST00000489544 RPL37AP61513 92 aaKnown RBP5.15□□□□□ -1.59
SF1-218ENST00000489544 NPC2P61916 151 aa5.15□□□□□ -1.59
SF1-218ENST00000489544 C7orf33Q8WU49 177 aa5.15□□□□□ -1.59
SF1-218ENST00000489544 TP73-AS1Q9UF72 201 aa5.15□□□□□ -1.59
SF1-218ENST00000489544 EIF4EBP3O60516 100 aaPredicted RBP5.14□□□□□ -1.59
SF1-218ENST00000489544 HNRNPA3P51991 378 aaKnown RBP5.14□□□□□ -1.59
SF1-218ENST00000489544 PRR3P79522 188 aaKnown RBP5.14□□□□□ -1.59
SF1-218ENST00000489544 LITAFQ99732 161 aa5.14□□□□□ -1.59
SF1-218ENST00000489544 RPL37AP8A6NKH3 93 aa5.13□□□□□ -1.59
SF1-218ENST00000489544 VPREB1P12018 145 aa5.13□□□□□ -1.59
SF1-218ENST00000489544 JOSD1Q15040 202 aaPredicted RBP5.13□□□□□ -1.59
SF1-218ENST00000489544 PYY3Q5JQD4 70 aa5.13□□□□□ -1.59
SF1-218ENST00000489544 SOSTDC1Q6X4U4 206 aa5.13□□□□□ -1.59
SF1-218ENST00000489544 BOD1L2Q8IYS8 172 aa5.13□□□□□ -1.59
SF1-218ENST00000489544 PSORS1C2Q9UIG4 136 aa5.13□□□□□ -1.59
SF1-218ENST00000489544 PLA2G2DQ9UNK4 145 aa5.13□□□□□ -1.59
SF1-218ENST00000489544 HERC1Q15751 4861 aa5.13□□□□□ -1.59
SF1-218ENST00000489544 LINC00587B1AMM8 73 aa5.12□□□□□ -1.59
SF1-218ENST00000489544 HSBP1L1C9JCN9 74 aa5.12□□□□□ -1.59
SF1-218ENST00000489544 PLA2G1BP04054 148 aaKnown RBP5.12□□□□□ -1.59
SF1-218ENST00000489544 AKR1D1P51857 326 aa5.12□□□□□ -1.59
SF1-218ENST00000489544 UBE2BP63146 152 aa5.12□□□□□ -1.59
SF1-218ENST00000489544 MRPL55Q7Z7F7 128 aaKnown RBP5.12□□□□□ -1.59
SF1-218ENST00000489544 LINC00167Q96N53 147 aa5.12□□□□□ -1.59
SF1-218ENST00000489544 SRRM2Q9UQ35 2752 aaKnown RBP5.11□□□□□ -1.59
SF1-218ENST00000489544 IGLV5-37A0A075B6J1 123 aa5.11□□□□□ -1.59
SF1-218ENST00000489544 NCR3O14931 201 aa5.11□□□□□ -1.59
SF1-218ENST00000489544 SCGB1D4Q6XE38 83 aa5.11□□□□□ -1.59
SF1-218ENST00000489544 NKAPP1Q8N9T2 125 aa5.11□□□□□ -1.59
SF1-218ENST00000489544 PAM16Q9Y3D7 125 aa5.11□□□□□ -1.59
SF1-218ENST00000489544 IGKV2-28A0A075B6P5 120 aa5.1□□□□□ -1.59
SF1-218ENST00000489544 IGKV2D-28P01615 120 aa5.1□□□□□ -1.59
SF1-218ENST00000489544 INAFM2P0DMQ5 153 aa5.1□□□□□ -1.59
SF1-218ENST00000489544 RPL24P83731 157 aaKnown RBP5.1□□□□□ -1.59
SF1-218ENST00000489544 C1orf137Q5JT78 98 aa5.1□□□□□ -1.59
SF1-218ENST00000489544 C14orf144Q96I85 54 aa5.1□□□□□ -1.59
SF1-218ENST00000489544 PKHD1L1Q86WI1 4243 aa5.1□□□□□ -1.59
SF1-218ENST00000489544 TIMM17BO60830 172 aa5.09□□□□□ -1.59
SF1-218ENST00000489544 SPATA45Q537H7 98 aa5.09□□□□□ -1.59
SF1-218ENST00000489544 LBHQ53QV2 105 aaPredicted RBP5.09□□□□□ -1.59
SF1-218ENST00000489544 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
SF1-218ENST00000489544 LINC00308Q8TCZ7 52 aa5.09□□□□□ -1.59
SF1-218ENST00000489544 MIEN1Q9BRT3 115 aa5.09□□□□□ -1.59
SF1-218ENST00000489544 VAMP8Q9BV40 100 aa5.09□□□□□ -1.59
SF1-218ENST00000489544 LOC107984156A0A0G2JMH3 177 aa5.08□□□□□ -1.6
SF1-218ENST00000489544 TMEM238C9JI98 176 aa5.08□□□□□ -1.6
SF1-218ENST00000489544 M0R378 163 aa5.08□□□□□ -1.6
SF1-218ENST00000489544 COX8AP10176 69 aa5.08□□□□□ -1.6
SF1-218ENST00000489544 ARL17AQ8IVW1 177 aa5.08□□□□□ -1.6
SF1-218ENST00000489544 LRP1Q07954 4544 aaKnown RBP5.08□□□□□ -1.6
SF1-218ENST00000489544 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
SF1-218ENST00000489544 IGLV1-50A0A075B6I6 118 aa5.07□□□□□ -1.6
SF1-218ENST00000489544 C21orf62-AS1Q17RA5 79 aa5.07□□□□□ -1.6
SF1-218ENST00000489544 MUSTN1Q8IVN3 82 aa5.07□□□□□ -1.6
SF1-218ENST00000489544 SPANXDQ9BXN6 97 aa5.07□□□□□ -1.6
SF1-218ENST00000489544 SPANXCQ9NY87 97 aa5.07□□□□□ -1.6
SF1-218ENST00000489544 FLG2Q5D862 2391 aaPredicted RBP5.07□□□□□ -1.6
SF1-218ENST00000489544 TRBV10-3A0A0K0K1G6 114 aa5.06□□□□□ -1.6
SF1-218ENST00000489544 IGLV7-43P04211 117 aa5.06□□□□□ -1.6
SF1-218ENST00000489544 SRSF9Q13242 221 aaKnown RBP eCLIP5.06□□□□□ -1.6
SF1-218ENST00000489544 MYCBP2O75592 4640 aa5.06□□□□□ -1.6
SF1-218ENST00000489544 NDUFC2O95298 119 aa5.05□□□□□ -1.6
SF1-218ENST00000489544 SPANXB1Q9NS25 103 aaPredicted RBP5.05□□□□□ -1.6
SF1-218ENST00000489544 LOC105371267A0A1B0GV96 52 aa5.04□□□□□ -1.6
SF1-218ENST00000489544 A6NJY4 79 aa5.04□□□□□ -1.6
SF1-218ENST00000489544 DLEU1O43261 78 aa5.04□□□□□ -1.6
SF1-218ENST00000489544 BCE1O60756 84 aa5.04□□□□□ -1.6
SF1-218ENST00000489544 DDTP30046 118 aa5.04□□□□□ -1.6
SF1-218ENST00000489544 PRLHP81277 87 aa5.04□□□□□ -1.6
SF1-218ENST00000489544 REG3GQ6UW15 175 aa5.04□□□□□ -1.6
SF1-218ENST00000489544 C2orf91Q6ZV80 131 aa5.04□□□□□ -1.6
SF1-218ENST00000489544 TMEM126AQ9H061 195 aa5.04□□□□□ -1.6
SF1-218ENST00000489544 TRBV10-2A0A0K0K1G8 114 aa5.03□□□□□ -1.6
SF1-218ENST00000489544 S100A7L2Q5SY68 101 aa5.03□□□□□ -1.6
SF1-218ENST00000489544 SLC25A34Q6PIV7 304 aa5.03□□□□□ -1.6
SF1-218ENST00000489544 LINC00337Q8N6G1 96 aa5.03□□□□□ -1.6
SF1-218ENST00000489544 ZNF861PO60384 105 aa5.02□□□□□ -1.61
SF1-218ENST00000489544 IGLV6-57P01721 117 aa5.02□□□□□ -1.61
SF1-218ENST00000489544 IFITM1P13164 125 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms