RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 TLX1NBP0CAT3 122 aa7.21□□□□□ -1.26
USP11-210ENST00000489030 SMIM6P0DI80 62 aa7.21□□□□□ -1.26
USP11-210ENST00000489030 C9orf116Q5BN46 136 aaPredicted RBP7.21□□□□□ -1.26
USP11-210ENST00000489030 MEIG1Q5JSS6 88 aa7.21□□□□□ -1.26
USP11-210ENST00000489030 ERG28Q9UKR5 140 aa7.21□□□□□ -1.26
USP11-210ENST00000489030 A0A087WYN8 130 aa7.2□□□□□ -1.26
USP11-210ENST00000489030 NDUFC2-KCTD14E9PQ53 114 aa7.2□□□□□ -1.26
USP11-210ENST00000489030 PFN2P35080 140 aa7.2□□□□□ -1.26
USP11-210ENST00000489030 A0A0J9YXY3 114 aa7.19□□□□□ -1.26
USP11-210ENST00000489030 COX8AP10176 69 aa7.19□□□□□ -1.26
USP11-210ENST00000489030 LINC00158P58513 81 aa7.19□□□□□ -1.26
USP11-210ENST00000489030 RPL18AQ02543 176 aaKnown RBP7.19□□□□□ -1.26
USP11-210ENST00000489030 SCGB1D4Q6XE38 83 aa7.19□□□□□ -1.26
USP11-210ENST00000489030 PCP2Q8IVA1 136 aa7.19□□□□□ -1.26
USP11-210ENST00000489030 TTTY13Q9BZ97 58 aa7.19□□□□□ -1.26
USP11-210ENST00000489030 DLEU1O43261 78 aa7.18□□□□□ -1.26
USP11-210ENST00000489030 SMIM13P0DJ93 91 aa7.18□□□□□ -1.26
USP11-210ENST00000489030 BOD1L2Q8IYS8 172 aa7.18□□□□□ -1.26
USP11-210ENST00000489030 LINC00474Q9P2X8 69 aa7.18□□□□□ -1.26
USP11-210ENST00000489030 TIMM17BO60830 172 aa7.17□□□□□ -1.26
USP11-210ENST00000489030 GAGE2BQ13066 116 aa7.17□□□□□ -1.26
USP11-210ENST00000489030 GAGE2EQ4V326 116 aa7.17□□□□□ -1.26
USP11-210ENST00000489030 Q6ZRP5 223 aa7.17□□□□□ -1.26
USP11-210ENST00000489030 SPACA4Q8TDM5 124 aa7.17□□□□□ -1.26
USP11-210ENST00000489030 DPH3Q96FX2 82 aa7.17□□□□□ -1.26
USP11-210ENST00000489030 C14orf144Q96I85 54 aa7.17□□□□□ -1.26
USP11-210ENST00000489030 GAGE2DQ9UEU5 116 aa7.17□□□□□ -1.26
USP11-210ENST00000489030 A0A0U1RRA0 63 aa7.16□□□□□ -1.26
USP11-210ENST00000489030 PTTG1IPP53801 180 aa7.16□□□□□ -1.26
USP11-210ENST00000489030 SLC25A34Q6PIV7 304 aa7.16□□□□□ -1.26
USP11-210ENST00000489030 LINC01600Q96MT4 127 aa7.16□□□□□ -1.26
USP11-210ENST00000489030 A0A096LNI7 61 aa7.15□□□□□ -1.26
USP11-210ENST00000489030 TMEM238C9JI98 176 aa7.15□□□□□ -1.26
USP11-210ENST00000489030 IGKV2-24A0A0C4DH68 120 aa7.14□□□□□ -1.27
USP11-210ENST00000489030 Q6ZVH6 145 aa7.14□□□□□ -1.27
USP11-210ENST00000489030 MIR7-3HGQ8N6C7 128 aa7.14□□□□□ -1.27
USP11-210ENST00000489030 C12orf57Q99622 126 aa7.14□□□□□ -1.27
USP11-210ENST00000489030 PLAC8Q9NZF1 115 aa7.14□□□□□ -1.27
USP11-210ENST00000489030 KRTAP10-8P60410 259 aa7.13□□□□□ -1.27
USP11-210ENST00000489030 PRR3P79522 188 aaKnown RBP7.13□□□□□ -1.27
USP11-210ENST00000489030 ADAMTSL4-AS1Q5T5F5 129 aa7.13□□□□□ -1.27
USP11-210ENST00000489030 COPS9Q8WXC6 57 aa7.13□□□□□ -1.27
USP11-210ENST00000489030 SND1-IT1Q9HBX3 110 aa7.13□□□□□ -1.27
USP11-210ENST00000489030 SRSF9Q13242 221 aaKnown RBP eCLIP7.12□□□□□ -1.27
USP11-210ENST00000489030 LINC00518Q8N0U6 118 aa7.12□□□□□ -1.27
USP11-210ENST00000489030 LITAFQ99732 161 aa7.12□□□□□ -1.27
USP11-210ENST00000489030 MIEN1Q9BRT3 115 aa7.12□□□□□ -1.27
USP11-210ENST00000489030 SPANXDQ9BXN6 97 aa7.12□□□□□ -1.27
USP11-210ENST00000489030 XAGE1AQ9HD64 81 aa7.12□□□□□ -1.27
USP11-210ENST00000489030 SPANXCQ9NY87 97 aa7.12□□□□□ -1.27
USP11-210ENST00000489030 HIGD1BQ9P298 99 aa7.12□□□□□ -1.27
USP11-210ENST00000489030 UQCR10Q9UDW1 63 aa7.12□□□□□ -1.27
USP11-210ENST00000489030 LPAP08519 4548 aa7.11□□□□□ -1.27
USP11-210ENST00000489030 LOC107984156A0A0G2JMH3 177 aa7.11□□□□□ -1.27
USP11-210ENST00000489030 IFITM1P13164 125 aa7.11□□□□□ -1.27
USP11-210ENST00000489030 C9orf129Q5T035 196 aaKnown RBP7.11□□□□□ -1.27
USP11-210ENST00000489030 ARL17AQ8IVW1 177 aa7.11□□□□□ -1.27
USP11-210ENST00000489030 DAND5Q8N907 189 aa7.11□□□□□ -1.27
USP11-210ENST00000489030 SPANXB1Q9NS25 103 aaPredicted RBP7.11□□□□□ -1.27
USP11-210ENST00000489030 RPL24P83731 157 aaKnown RBP7.1□□□□□ -1.27
USP11-210ENST00000489030 LINC00308Q8TCZ7 52 aa7.1□□□□□ -1.27
USP11-210ENST00000489030 HIST1H4GQ99525 98 aa7.09□□□□□ -1.27
USP11-210ENST00000489030 PRO1933Q9H354 126 aa7.09□□□□□ -1.27
USP11-210ENST00000489030 A0A1W2PNN7 141 aa7.08□□□□□ -1.28
USP11-210ENST00000489030 TSTD3H0UI37 97 aa7.08□□□□□ -1.28
USP11-210ENST00000489030 NPC2P61916 151 aa7.08□□□□□ -1.28
USP11-210ENST00000489030 MUSTN1Q8IVN3 82 aa7.08□□□□□ -1.28
USP11-210ENST00000489030 C7orf33Q8WU49 177 aa7.08□□□□□ -1.28
USP11-210ENST00000489030 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
USP11-210ENST00000489030 NDUFC2O95298 119 aa7.07□□□□□ -1.28
USP11-210ENST00000489030 TAL2Q16559 108 aa7.07□□□□□ -1.28
USP11-210ENST00000489030 C2orf91Q6ZV80 131 aa7.07□□□□□ -1.28
USP11-210ENST00000489030 NKAPP1Q8N9T2 125 aa7.07□□□□□ -1.28
USP11-210ENST00000489030 TP73-AS1Q9UF72 201 aa7.07□□□□□ -1.28
USP11-210ENST00000489030 IGLV5-37A0A075B6J1 123 aa7.06□□□□□ -1.28
USP11-210ENST00000489030 FAM168BA1KXE4 195 aa7.06□□□□□ -1.28
USP11-210ENST00000489030 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
USP11-210ENST00000489030 C22orf24Q9Y442 160 aa7.06□□□□□ -1.28
USP11-210ENST00000489030 VPREB1P12018 145 aa7.05□□□□□ -1.28
USP11-210ENST00000489030 LBHQ53QV2 105 aaPredicted RBP7.05□□□□□ -1.28
USP11-210ENST00000489030 SOSTDC1Q6X4U4 206 aa7.05□□□□□ -1.28
USP11-210ENST00000489030 M0R378 163 aa7.04□□□□□ -1.28
USP11-210ENST00000489030 TRBV10-2A0A0K0K1G8 114 aa7.03□□□□□ -1.28
USP11-210ENST00000489030 M0QXV9 152 aa7.03□□□□□ -1.28
USP11-210ENST00000489030 EIF4EBP3O60516 100 aaPredicted RBP7.03□□□□□ -1.28
USP11-210ENST00000489030 SPINK6Q6UWN8 80 aa7.03□□□□□ -1.28
USP11-210ENST00000489030 MRPL55Q7Z7F7 128 aaKnown RBP7.03□□□□□ -1.28
USP11-210ENST00000489030 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
USP11-210ENST00000489030 HSD52Q0P140 79 aa7.02□□□□□ -1.29
USP11-210ENST00000489030 PHF5AQ7RTV0 110 aaKnown RBP7.02□□□□□ -1.29
USP11-210ENST00000489030 CEND1Q8N111 149 aa7.02□□□□□ -1.29
USP11-210ENST00000489030 NCR3O14931 201 aa7.01□□□□□ -1.29
USP11-210ENST00000489030 Q8NDZ9 215 aa7.01□□□□□ -1.29
USP11-210ENST00000489030 LINC00167Q96N53 147 aa7.01□□□□□ -1.29
USP11-210ENST00000489030 TMEM238LA0A1B0GVL6 79 aa7□□□□□ -1.29
USP11-210ENST00000489030 A4D1N5 150 aa7□□□□□ -1.29
USP11-210ENST00000489030 A6NJY4 79 aa7□□□□□ -1.29
USP11-210ENST00000489030 UBE2BP63146 152 aa7□□□□□ -1.29
USP11-210ENST00000489030 S100A7L2Q5SY68 101 aa7□□□□□ -1.29
USP11-210ENST00000489030 REG3GQ6UW15 175 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms