RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 FAM168BA1KXE4 195 aa4□□□□□ -1.77
SEC22C-215ENST00000487701 HSBP1O75506 76 aa4□□□□□ -1.77
SEC22C-215ENST00000487701 CKS1BP61024 79 aa4□□□□□ -1.77
SEC22C-215ENST00000487701 GAGE2EQ4V326 116 aa4□□□□□ -1.77
SEC22C-215ENST00000487701 C6orf226Q5I0X4 101 aa4□□□□□ -1.77
SEC22C-215ENST00000487701 KRTAP7-1Q8IUC3 87 aa4□□□□□ -1.77
SEC22C-215ENST00000487701 COX7B2Q8TF08 81 aa4□□□□□ -1.77
SEC22C-215ENST00000487701 GAGE2DQ9UEU5 116 aa4□□□□□ -1.77
SEC22C-215ENST00000487701 TRAV12-1A0A0B4J245 112 aa3.99□□□□□ -1.77
SEC22C-215ENST00000487701 NDUFC2-KCTD14E9PQ53 114 aa3.99□□□□□ -1.77
SEC22C-215ENST00000487701 F8VRH5 84 aa3.99□□□□□ -1.77
SEC22C-215ENST00000487701 H3BRM9 83 aa3.99□□□□□ -1.77
SEC22C-215ENST00000487701 PRR3P79522 188 aaKnown RBP3.99□□□□□ -1.77
SEC22C-215ENST00000487701 C9orf129Q5T035 196 aaKnown RBP3.99□□□□□ -1.77
SEC22C-215ENST00000487701 C7orf33Q8WU49 177 aa3.99□□□□□ -1.77
SEC22C-215ENST00000487701 FAT3Q8TDW7 4589 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HIST1H2BKO60814 126 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HIST1H2BJP06899 126 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 CFC1BP0CG36 223 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 CFC1P0CG37 223 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HIST1H2BOP23527 126 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HIST1H2BBP33778 126 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 CXCL5P42830 114 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HIST1H2BDP58876 126 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HIST1H2BCP62807 126 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HIST2H2BEQ16778 126 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.98□□□□□ -1.77
SEC22C-215ENST00000487701 PHF5AQ7RTV0 110 aaKnown RBP3.98□□□□□ -1.77
SEC22C-215ENST00000487701 FAM19A5Q7Z5A7 132 aaPredicted RBP3.98□□□□□ -1.77
SEC22C-215ENST00000487701 KRTAP11-1Q8IUC1 163 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HIST1H2BHQ93079 126 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HIST1H2BNQ99877 126 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HIST1H2BMQ99879 126 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 CHTOPQ9Y3Y2 248 aaKnown RBP3.98□□□□□ -1.77
SEC22C-215ENST00000487701 HERC1Q15751 4861 aa3.98□□□□□ -1.77
SEC22C-215ENST00000487701 TMEM223A0PJW6 202 aa3.97□□□□□ -1.77
SEC22C-215ENST00000487701 LEPROTL1O95214 131 aa3.97□□□□□ -1.77
SEC22C-215ENST00000487701 LINC01547P58512 204 aaPredicted RBP3.97□□□□□ -1.77
SEC22C-215ENST00000487701 TMEM170BQ5T4T1 132 aa3.97□□□□□ -1.77
SEC22C-215ENST00000487701 XAGE1AQ9HD64 81 aa3.97□□□□□ -1.77
SEC22C-215ENST00000487701 H0Y8G0 127 aa3.96□□□□□ -1.78
SEC22C-215ENST00000487701 ATP6V1G1O75348 118 aa3.96□□□□□ -1.78
SEC22C-215ENST00000487701 FABP4P15090 132 aa3.96□□□□□ -1.78
SEC22C-215ENST00000487701 ZNF625Q96I27 306 aaPredicted RBP3.96□□□□□ -1.78
SEC22C-215ENST00000487701 M0QXV9 152 aa3.95□□□□□ -1.78
SEC22C-215ENST00000487701 SCGB1D1O95968 90 aa3.95□□□□□ -1.78
SEC22C-215ENST00000487701 PMCHL2Q9BQD1 86 aa3.95□□□□□ -1.78
SEC22C-215ENST00000487701 PSORS1C2Q9UIG4 136 aa3.95□□□□□ -1.78
SEC22C-215ENST00000487701 HSPB8Q9UJY1 196 aa3.95□□□□□ -1.78
SEC22C-215ENST00000487701 TSPEAR-AS2P59090 65 aa3.94□□□□□ -1.78
SEC22C-215ENST00000487701 COA6Q5JTJ3 125 aaKnown RBP3.94□□□□□ -1.78
SEC22C-215ENST00000487701 ERG28Q9UKR5 140 aa3.94□□□□□ -1.78
SEC22C-215ENST00000487701 OXTP01178 125 aa3.93□□□□□ -1.78
SEC22C-215ENST00000487701 MT1HL1P0DM35 61 aa3.93□□□□□ -1.78
SEC22C-215ENST00000487701 S100A1P23297 94 aa3.93□□□□□ -1.78
SEC22C-215ENST00000487701 PLNP26678 52 aa3.93□□□□□ -1.78
SEC22C-215ENST00000487701 PFN2P35080 140 aa3.93□□□□□ -1.78
SEC22C-215ENST00000487701 SRSF9Q13242 221 aaKnown RBP eCLIP3.93□□□□□ -1.78
SEC22C-215ENST00000487701 C1orf137Q5JT78 98 aa3.93□□□□□ -1.78
SEC22C-215ENST00000487701 Q8NDZ9 215 aa3.93□□□□□ -1.78
SEC22C-215ENST00000487701 SND1-IT1Q9HBX3 110 aa3.93□□□□□ -1.78
SEC22C-215ENST00000487701 C22orf24Q9Y442 160 aa3.93□□□□□ -1.78
SEC22C-215ENST00000487701 SYS1-DBNDD2H3BUS1 97 aa3.92□□□□□ -1.78
SEC22C-215ENST00000487701 DPM2O94777 84 aa3.92□□□□□ -1.78
SEC22C-215ENST00000487701 IGKCP01834 107 aa3.92□□□□□ -1.78
SEC22C-215ENST00000487701 MAP1LC3CQ9BXW4 147 aa3.92□□□□□ -1.78
SEC22C-215ENST00000487701 LEPROTO15243 131 aa3.91□□□□□ -1.78
SEC22C-215ENST00000487701 IGLV7-43P04211 117 aa3.91□□□□□ -1.78
SEC22C-215ENST00000487701 VPREB1P12018 145 aa3.91□□□□□ -1.78
SEC22C-215ENST00000487701 UBE2BP63146 152 aa3.91□□□□□ -1.78
SEC22C-215ENST00000487701 COX17Q14061 63 aa3.91□□□□□ -1.78
SEC22C-215ENST00000487701 SFTA2Q6UW10 78 aa3.91□□□□□ -1.78
SEC22C-215ENST00000487701 SPINK6Q6UWN8 80 aa3.91□□□□□ -1.78
SEC22C-215ENST00000487701 MRPL55Q7Z7F7 128 aaKnown RBP3.91□□□□□ -1.78
SEC22C-215ENST00000487701 TP73-AS1Q9UF72 201 aa3.91□□□□□ -1.78
SEC22C-215ENST00000487701 NDUFA12Q9UI09 145 aa3.91□□□□□ -1.78
SEC22C-215ENST00000487701 TNXBP22105 4242 aa3.9□□□□□ -1.78
SEC22C-215ENST00000487701 A0A0U1RRA0 63 aa3.9□□□□□ -1.79
SEC22C-215ENST00000487701 C3orf79P0CE67 100 aa3.9□□□□□ -1.79
SEC22C-215ENST00000487701 SMIM13P0DJ93 91 aa3.9□□□□□ -1.79
SEC22C-215ENST00000487701 LINC01545Q5VT33 79 aa3.9□□□□□ -1.79
SEC22C-215ENST00000487701 LINC00167Q96N53 147 aa3.9□□□□□ -1.79
SEC22C-215ENST00000487701 RPL37AP8A6NKH3 93 aa3.89□□□□□ -1.79
SEC22C-215ENST00000487701 E9PLD3 99 aa3.89□□□□□ -1.79
SEC22C-215ENST00000487701 J3QQQ9 107 aa3.89□□□□□ -1.79
SEC22C-215ENST00000487701 LINC00158P58513 81 aa3.89□□□□□ -1.79
SEC22C-215ENST00000487701 HERVK_113P61574 105 aa3.89□□□□□ -1.79
SEC22C-215ENST00000487701 HERV-K104P63124 156 aa3.89□□□□□ -1.79
SEC22C-215ENST00000487701 LBHQ53QV2 105 aaPredicted RBP3.89□□□□□ -1.79
SEC22C-215ENST00000487701 PET117Q6UWS5 81 aa3.89□□□□□ -1.79
SEC22C-215ENST00000487701 NKAPP1Q8N9T2 125 aa3.89□□□□□ -1.79
SEC22C-215ENST00000487701 PLEKHB2Q96CS7 222 aa3.89□□□□□ -1.79
SEC22C-215ENST00000487701 LINC01600Q96MT4 127 aa3.89□□□□□ -1.79
SEC22C-215ENST00000487701 MYMXA0A1B0GTQ4 84 aa3.88□□□□□ -1.79
SEC22C-215ENST00000487701 KRTDAPP60985 99 aa3.88□□□□□ -1.79
SEC22C-215ENST00000487701 MEIG1Q5JSS6 88 aa3.88□□□□□ -1.79
SEC22C-215ENST00000487701 REG3GQ6UW15 175 aa3.88□□□□□ -1.79
SEC22C-215ENST00000487701 MIR7-3HGQ8N6C7 128 aa3.88□□□□□ -1.79
SEC22C-215ENST00000487701 DAND5Q8N907 189 aa3.88□□□□□ -1.79
SEC22C-215ENST00000487701 IGKV2-28A0A075B6P5 120 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms