RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 TMEM126AQ9H061 195 aa13.57□□□□□ -0.24
HPS3-206ENST00000486530 IGKV2D-24A0A075B6R9 120 aa13.56□□□□□ -0.24
HPS3-206ENST00000486530 PRR3P79522 188 aaKnown RBP13.56□□□□□ -0.24
HPS3-206ENST00000486530 C2orf48Q96LS8 159 aa13.55□□□□□ -0.24
HPS3-206ENST00000486530 F8WDY8 70 aa13.53□□□□□ -0.24
HPS3-206ENST00000486530 Q8NDZ9 215 aa13.53□□□□□ -0.24
HPS3-206ENST00000486530 A0A087WYN8 130 aa13.53□□□□□ -0.24
HPS3-206ENST00000486530 NCR3O14931 201 aa13.53□□□□□ -0.24
HPS3-206ENST00000486530 DNAL4O96015 105 aa13.53□□□□□ -0.24
HPS3-206ENST00000486530 SIGMAR1Q99720 223 aa13.53□□□□□ -0.24
HPS3-206ENST00000486530 BAALC-AS2P0C853 105 aa13.52□□□□□ -0.25
HPS3-206ENST00000486530 CDIP1Q9H305 208 aa13.52□□□□□ -0.25
HPS3-206ENST00000486530 PCP4P48539 62 aa13.5□□□□□ -0.25
HPS3-206ENST00000486530 Q9HAA7 133 aa13.5□□□□□ -0.25
HPS3-206ENST00000486530 S100A7L2Q5SY68 101 aa13.5□□□□□ -0.25
HPS3-206ENST00000486530 Q6ZRU5 148 aa13.5□□□□□ -0.25
HPS3-206ENST00000486530 UPK3BQ9BT76 320 aa13.5□□□□□ -0.25
HPS3-206ENST00000486530 LECT2O14960 151 aa13.47□□□□□ -0.25
HPS3-206ENST00000486530 A0A1B0GX51 115 aa13.46□□□□□ -0.25
HPS3-206ENST00000486530 COL7A1Q02388 2944 aa13.46□□□□□ -0.26
HPS3-206ENST00000486530 NDUFC2-KCTD14E9PQ53 114 aa13.45□□□□□ -0.26
HPS3-206ENST00000486530 RMI2Q96E14 147 aa13.45□□□□□ -0.26
HPS3-206ENST00000486530 XAGE1AQ9HD64 81 aa13.45□□□□□ -0.26
HPS3-206ENST00000486530 IGLV6-57P01721 117 aa13.44□□□□□ -0.26
HPS3-206ENST00000486530 RPL18AQ02543 176 aaKnown RBP13.44□□□□□ -0.26
HPS3-206ENST00000486530 C22orf24Q9Y442 160 aa13.44□□□□□ -0.26
HPS3-206ENST00000486530 SYCNQ0VAF6 134 aa13.43□□□□□ -0.26
HPS3-206ENST00000486530 NHLRC4P0CG21 123 aaPredicted RBP13.42□□□□□ -0.26
HPS3-206ENST00000486530 C6orf99Q4VX62 202 aa13.42□□□□□ -0.26
HPS3-206ENST00000486530 FAM240AA0A1B0GVK7 77 aa13.41□□□□□ -0.26
HPS3-206ENST00000486530 LINC00167Q96N53 147 aa13.4□□□□□ -0.26
HPS3-206ENST00000486530 ORMDL1Q9P0S3 153 aa13.4□□□□□ -0.26
HPS3-206ENST00000486530 VPREB1P12018 145 aa13.39□□□□□ -0.27
HPS3-206ENST00000486530 XGP55808 180 aa13.39□□□□□ -0.27
HPS3-206ENST00000486530 Q8N814 137 aa13.39□□□□□ -0.27
HPS3-206ENST00000486530 SNCGO76070 127 aa13.38□□□□□ -0.27
HPS3-206ENST00000486530 INAFM2P0DMQ5 153 aa13.38□□□□□ -0.27
HPS3-206ENST00000486530 SCGB1A1P11684 91 aa13.38□□□□□ -0.27
HPS3-206ENST00000486530 STAB2Q8WWQ8 2551 aa13.37□□□□□ -0.27
HPS3-206ENST00000486530 TRBV10-3A0A0K0K1G6 114 aa13.37□□□□□ -0.27
HPS3-206ENST00000486530 USP17L23D6RBM5 183 aa13.37□□□□□ -0.27
HPS3-206ENST00000486530 GAGE2EQ4V326 116 aa13.36□□□□□ -0.27
HPS3-206ENST00000486530 Q6ZRP5 223 aa13.36□□□□□ -0.27
HPS3-206ENST00000486530 GAGE2DQ9UEU5 116 aa13.36□□□□□ -0.27
HPS3-206ENST00000486530 TRAV23DV6A0A075B6W5 121 aa13.36□□□□□ -0.27
HPS3-206ENST00000486530 SLPIP03973 132 aa13.36□□□□□ -0.27
HPS3-206ENST00000486530 MT-ATP8P03928 68 aa13.35□□□□□ -0.27
HPS3-206ENST00000486530 M0R378 163 aa13.34□□□□□ -0.27
HPS3-206ENST00000486530 LINC00575Q6W349 94 aa13.34□□□□□ -0.27
HPS3-206ENST00000486530 ACYP1P07311 99 aa13.33□□□□□ -0.27
HPS3-206ENST00000486530 TLX1NBP0CAT3 122 aa13.33□□□□□ -0.27
HPS3-206ENST00000486530 C21orf62-AS1Q17RA5 79 aa13.33□□□□□ -0.27
HPS3-206ENST00000486530 CASC10Q5T4H9 136 aa13.33□□□□□ -0.27
HPS3-206ENST00000486530 MEGF8Q7Z7M0 2845 aa13.33□□□□□ -0.28
HPS3-206ENST00000486530 APLNQ9ULZ1 77 aa13.33□□□□□ -0.28
HPS3-206ENST00000486530 PRKDCP78527 4128 aaKnown RBP13.32□□□□□ -0.28
HPS3-206ENST00000486530 DIRC1Q969H9 104 aa13.32□□□□□ -0.28
HPS3-206ENST00000486530 OBSCN-AS1Q96MR7 158 aa13.32□□□□□ -0.28
HPS3-206ENST00000486530 DYNC2H1Q8NCM8 4307 aaKnown RBP13.32□□□□□ -0.28
HPS3-206ENST00000486530 DNAH1Q9P2D7 4330 aa13.31□□□□□ -0.28
HPS3-206ENST00000486530 C9orf129Q5T035 196 aaKnown RBP13.3□□□□□ -0.28
HPS3-206ENST00000486530 UBE2DNLQ8IWF7 75 aa13.3□□□□□ -0.28
HPS3-206ENST00000486530 hADV29S1A0JD25 119 aa13.29□□□□□ -0.28
HPS3-206ENST00000486530 TMEM256-PLSCR3K7ERE1 68 aa13.29□□□□□ -0.28
HPS3-206ENST00000486530 ZNF73O43830 326 aaPredicted RBP13.29□□□□□ -0.28
HPS3-206ENST00000486530 TRBV7-6A0A0J9YX20 115 aa13.27□□□□□ -0.28
HPS3-206ENST00000486530 KRTAP1-5Q9BYS1 174 aa13.25□□□□□ -0.29
HPS3-206ENST00000486530 NUPR2A6NF83 97 aa13.25□□□□□ -0.29
HPS3-206ENST00000486530 COX7BP24311 80 aa13.25□□□□□ -0.29
HPS3-206ENST00000486530 C14orf132Q9NPU4 83 aa13.25□□□□□ -0.29
HPS3-206ENST00000486530 PLA2G2DQ9UNK4 145 aa13.25□□□□□ -0.29
HPS3-206ENST00000486530 JMJD7-PLA2G4BH0Y9G9 81 aa13.24□□□□□ -0.29
HPS3-206ENST00000486530 ELOF1P60002 83 aaKnown RBP13.24□□□□□ -0.29
HPS3-206ENST00000486530 NKAPP1Q8N9T2 125 aa13.24□□□□□ -0.29
HPS3-206ENST00000486530 GAGE2AQ6NT46 116 aa13.23□□□□□ -0.29
HPS3-206ENST00000486530 H3BQ85 93 aa13.21□□□□□ -0.29
HPS3-206ENST00000486530 SERTAD4-AS1Q5TG53 156 aa13.21□□□□□ -0.3
HPS3-206ENST00000486530 TTC32Q5I0X7 151 aa13.2□□□□□ -0.3
HPS3-206ENST00000486530 CSMD3Q7Z407 3707 aa13.19□□□□□ -0.3
HPS3-206ENST00000486530 IGLV5-37A0A075B6J1 123 aa13.19□□□□□ -0.3
HPS3-206ENST00000486530 LOC107984640A0A0U1RRK4 108 aa13.19□□□□□ -0.3
HPS3-206ENST00000486530 Q6ZQY7 126 aa13.19□□□□□ -0.3
HPS3-206ENST00000486530 PSCAO43653 123 aa13.18□□□□□ -0.3
HPS3-206ENST00000486530 SDIM1Q6ZPB5 146 aa13.18□□□□□ -0.3
HPS3-206ENST00000486530 DNAH7Q8WXX0 4024 aa13.17□□□□□ -0.3
HPS3-206ENST00000486530 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.17□□□□□ -0.3
HPS3-206ENST00000486530 C7orf33Q8WU49 177 aa13.17□□□□□ -0.3
HPS3-206ENST00000486530 KCNQ1DNQ9H478 68 aa13.17□□□□□ -0.3
HPS3-206ENST00000486530 GAGE2BQ13066 116 aa13.16□□□□□ -0.3
HPS3-206ENST00000486530 Q6Q795 121 aa13.16□□□□□ -0.3
HPS3-206ENST00000486530 LINC00528Q8N1L1 170 aa13.16□□□□□ -0.3
HPS3-206ENST00000486530 A0A1B0GV72 72 aa13.15□□□□□ -0.3
HPS3-206ENST00000486530 GHRHP01286 108 aa13.15□□□□□ -0.3
HPS3-206ENST00000486530 SMCR5Q8TEV8 140 aa13.14□□□□□ -0.31
HPS3-206ENST00000486530 LINC00643Q86TS7 51 aa13.14□□□□□ -0.31
HPS3-206ENST00000486530 LYSTQ99698 3801 aa13.14□□□□□ -0.31
HPS3-206ENST00000486530 PLECQ15149 4684 aaKnown RBP13.13□□□□□ -0.31
HPS3-206ENST00000486530 CNBPP62633 177 aaKnown RBP13.13□□□□□ -0.31
HPS3-206ENST00000486530 CCKP06307 115 aa13.12□□□□□ -0.31
HPS3-206ENST00000486530 C14orf177Q52M58 125 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms