RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
TNXB-205ENST00000486148 APOC4P55056 127 aa11.95□□□□□ -0.5
TNXB-205ENST00000486148 Q8NAQ8 132 aa11.94□□□□□ -0.5
TNXB-205ENST00000486148 HECTD1Q9ULT8 2610 aa11.94□□□□□ -0.5
TNXB-205ENST00000486148 OTOGQ6ZRI0 2925 aa11.94□□□□□ -0.5
TNXB-205ENST00000486148 TRAV23DV6A0A075B6W5 121 aa11.94□□□□□ -0.5
TNXB-205ENST00000486148 Q8NDZ9 215 aa11.94□□□□□ -0.5
TNXB-205ENST00000486148 MRAPQ8TCY5 172 aa11.94□□□□□ -0.5
TNXB-205ENST00000486148 COX17Q14061 63 aa11.93□□□□□ -0.5
TNXB-205ENST00000486148 NOTCH2Q04721 2471 aa11.92□□□□□ -0.5
TNXB-205ENST00000486148 NDUFC2O95298 119 aa11.92□□□□□ -0.5
TNXB-205ENST00000486148 HTN3P15516 51 aa11.92□□□□□ -0.5
TNXB-205ENST00000486148 FAM19A1Q7Z5A9 133 aa11.92□□□□□ -0.5
TNXB-205ENST00000486148 ORMDL1Q9P0S3 153 aa11.92□□□□□ -0.5
TNXB-205ENST00000486148 NDUFC2-KCTD14E9PQ53 114 aa11.91□□□□□ -0.5
TNXB-205ENST00000486148 C20orf197Q8N268 126 aa11.91□□□□□ -0.5
TNXB-205ENST00000486148 NSD1Q96L73 2696 aaPredicted RBP11.9□□□□□ -0.5
TNXB-205ENST00000486148 C6orf223Q8N319 242 aa11.9□□□□□ -0.5
TNXB-205ENST00000486148 CCKP06307 115 aa11.9□□□□□ -0.5
TNXB-205ENST00000486148 C10orf25Q5T742 122 aa11.9□□□□□ -0.5
TNXB-205ENST00000486148 LINC00336Q6ZUF6 198 aa11.89□□□□□ -0.51
TNXB-205ENST00000486148 LINC00167Q96N53 147 aa11.89□□□□□ -0.51
TNXB-205ENST00000486148 MIFP14174 115 aa11.89□□□□□ -0.51
TNXB-205ENST00000486148 FAM236DA0A1B0GTK5 79 aa11.88□□□□□ -0.51
TNXB-205ENST00000486148 EPM2AB3EWF7 344 aa11.88□□□□□ -0.51
TNXB-205ENST00000486148 FAM236CP0DP71 79 aa11.88□□□□□ -0.51
TNXB-205ENST00000486148 UNQ6190/PRO20217Q6UXQ8 127 aa11.88□□□□□ -0.51
TNXB-205ENST00000486148 Q8N814 137 aa11.88□□□□□ -0.51
TNXB-205ENST00000486148 SPART-AS1P0CW21 52 aa11.87□□□□□ -0.51
TNXB-205ENST00000486148 ENHOQ6UWT2 76 aa11.87□□□□□ -0.51
TNXB-205ENST00000486148 LELP1Q5T871 98 aa11.87□□□□□ -0.51
TNXB-205ENST00000486148 TRRAPQ9Y4A5 3859 aa11.87□□□□□ -0.51
TNXB-205ENST00000486148 SPAG11BQ08648 103 aa11.86□□□□□ -0.51
TNXB-205ENST00000486148 ATRQ13535 2644 aa11.86□□□□□ -0.51
TNXB-205ENST00000486148 KLK12Q9UKR0 248 aa11.85□□□□□ -0.51
TNXB-205ENST00000486148 C6orf99Q4VX62 202 aa11.85□□□□□ -0.51
TNXB-205ENST00000486148 IGHV4-30-4P0DP06 118 aa11.84□□□□□ -0.51
TNXB-205ENST00000486148 H7BZZ5 65 aa11.84□□□□□ -0.51
TNXB-205ENST00000486148 PRO0628Q9UI54 55 aa11.84□□□□□ -0.51
TNXB-205ENST00000486148 HIVEP1P15822 2718 aa11.84□□□□□ -0.51
TNXB-205ENST00000486148 CYSRT1A8MQ03 144 aa11.83□□□□□ -0.51
TNXB-205ENST00000486148 PRR34Q9NV39 138 aa11.83□□□□□ -0.52
TNXB-205ENST00000486148 LYPD5Q6UWN5 251 aa11.83□□□□□ -0.52
TNXB-205ENST00000486148 S100A7L2Q5SY68 101 aa11.82□□□□□ -0.52
TNXB-205ENST00000486148 ATP5EP2Q5VTU8 51 aa11.82□□□□□ -0.52
TNXB-205ENST00000486148 SERP1Q9Y6X1 66 aa11.82□□□□□ -0.52
TNXB-205ENST00000486148 TEP1Q99973 2627 aaKnown RBP11.82□□□□□ -0.52
TNXB-205ENST00000486148 A0A0J9YWU9 116 aa11.8□□□□□ -0.52
TNXB-205ENST00000486148 TMEM256-PLSCR3K7ERE1 68 aa11.8□□□□□ -0.52
TNXB-205ENST00000486148 JMJD7-PLA2G4BH0Y9G9 81 aa11.78□□□□□ -0.52
TNXB-205ENST00000486148 LINC00575Q6W349 94 aa11.78□□□□□ -0.52
TNXB-205ENST00000486148 FP248Q71RG6 208 aaPredicted RBP11.78□□□□□ -0.52
TNXB-205ENST00000486148 C1orf43Q9BWL3 253 aa11.76□□□□□ -0.53
TNXB-205ENST00000486148 C6orf48Q9UBA6 75 aa11.75□□□□□ -0.53
TNXB-205ENST00000486148 TRBV10-3A0A0K0K1G6 114 aa11.75□□□□□ -0.53
TNXB-205ENST00000486148 IGLV6-57P01721 117 aa11.75□□□□□ -0.53
TNXB-205ENST00000486148 MUC7Q8TAX7 377 aa11.75□□□□□ -0.53
TNXB-205ENST00000486148 TRAV7A0A075B6U4 112 aa11.74□□□□□ -0.53
TNXB-205ENST00000486148 RETNQ9HD89 108 aa11.74□□□□□ -0.53
TNXB-205ENST00000486148 SNURFQ9Y675 71 aa11.74□□□□□ -0.53
TNXB-205ENST00000486148 XAGE1AQ9HD64 81 aa11.73□□□□□ -0.53
TNXB-205ENST00000486148 RMI2Q96E14 147 aa11.73□□□□□ -0.53
TNXB-205ENST00000486148 UBL5Q9BZL1 73 aa11.73□□□□□ -0.53
TNXB-205ENST00000486148 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
TNXB-205ENST00000486148 GVQW2A0A096LPI5 108 aaPredicted RBP11.73□□□□□ -0.53
TNXB-205ENST00000486148 WFDC10BQ8IUB3 73 aa11.73□□□□□ -0.53
TNXB-205ENST00000486148 KLKP1Q107X0 134 aa11.72□□□□□ -0.53
TNXB-205ENST00000486148 TRAV10A0A0B4J240 114 aa11.72□□□□□ -0.53
TNXB-205ENST00000486148 HIGD2BQ4VC39 106 aa11.7□□□□□ -0.54
TNXB-205ENST00000486148 M0R2N4 97 aa11.69□□□□□ -0.54
TNXB-205ENST00000486148 KPRPQ5T749 579 aaPredicted RBP11.69□□□□□ -0.54
TNXB-205ENST00000486148 LINC00474Q9P2X8 69 aa11.69□□□□□ -0.54
TNXB-205ENST00000486148 SMIM26A0A096LP01 95 aa11.69□□□□□ -0.54
TNXB-205ENST00000486148 F8WEM9 126 aa11.69□□□□□ -0.54
TNXB-205ENST00000486148 OXLD1Q5BKU9 147 aa11.69□□□□□ -0.54
TNXB-205ENST00000486148 ZNF561-AS1K7EIQ3 104 aa11.67□□□□□ -0.54
TNXB-205ENST00000486148 KRTAP10-11P60412 298 aa11.67□□□□□ -0.54
TNXB-205ENST00000486148 KRTAP26-1Q6PEX3 210 aa11.67□□□□□ -0.54
TNXB-205ENST00000486148 Q6ZQY7 126 aa11.67□□□□□ -0.54
TNXB-205ENST00000486148 Q6ZTC4 211 aa11.66□□□□□ -0.54
TNXB-205ENST00000486148 BCE1O60756 84 aa11.66□□□□□ -0.54
TNXB-205ENST00000486148 LINC01547P58512 204 aaPredicted RBP11.66□□□□□ -0.54
TNXB-205ENST00000486148 RBM3P98179 157 aaKnown RBP11.66□□□□□ -0.54
TNXB-205ENST00000486148 Q6ZQT0 140 aa11.66□□□□□ -0.54
TNXB-205ENST00000486148 LAMTOR3Q9UHA4 124 aa11.66□□□□□ -0.54
TNXB-205ENST00000486148 PKD1L1Q8TDX9 2849 aa11.66□□□□□ -0.54
TNXB-205ENST00000486148 CAMK2N2Q96S95 79 aa11.65□□□□□ -0.54
TNXB-205ENST00000486148 DIRC1Q969H9 104 aa11.64□□□□□ -0.55
TNXB-205ENST00000486148 TRBV7-6A0A0J9YX20 115 aa11.63□□□□□ -0.55
TNXB-205ENST00000486148 H3BNG1 76 aa11.63□□□□□ -0.55
TNXB-205ENST00000486148 F8WDY8 70 aa11.63□□□□□ -0.55
TNXB-205ENST00000486148 Q6ZRU5 148 aa11.63□□□□□ -0.55
TNXB-205ENST00000486148 ZNF73O43830 326 aaPredicted RBP11.62□□□□□ -0.55
TNXB-205ENST00000486148 VPREB1P12018 145 aa11.62□□□□□ -0.55
TNXB-205ENST00000486148 HAMPP81172 84 aa11.62□□□□□ -0.55
TNXB-205ENST00000486148 C15orf56Q8N910 161 aa11.62□□□□□ -0.55
TNXB-205ENST00000486148 LOC110117498A0A087WWA1 95 aa11.62□□□□□ -0.55
TNXB-205ENST00000486148 ESRGQ1W209 222 aa11.62□□□□□ -0.55
TNXB-205ENST00000486148 Q6ZVQ6 151 aa11.62□□□□□ -0.55
TNXB-205ENST00000486148 EGFEM1PQ0D2K5 195 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms