RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 LEPROTO15243 131 aa5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 PLA2G1BP04054 148 aaKnown RBP5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 CHTF8P0CG12 524 aa5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 TSPEAR-AS2P59090 65 aa5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 HERVK_113P61574 105 aa5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 C9orf116Q5BN46 136 aaPredicted RBP5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 Q6ZRP5 223 aa5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 CIRBP-AS1Q8TBR5 109 aa5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 HERC1Q15751 4861 aa5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 LINC00528Q8N1L1 170 aa5.9□□□□□ -1.46
SHROOM3-207ENST00000485780 PLEKHB2Q96CS7 222 aa5.9□□□□□ -1.46
SHROOM3-207ENST00000485780 PLAC8Q9NZF1 115 aa5.9□□□□□ -1.46
SHROOM3-207ENST00000485780 A0A087WYN8 130 aa5.89□□□□□ -1.47
SHROOM3-207ENST00000485780 IGKV2-24A0A0C4DH68 120 aa5.89□□□□□ -1.47
SHROOM3-207ENST00000485780 HSBP1L1C9JCN9 74 aa5.89□□□□□ -1.47
SHROOM3-207ENST00000485780 J3QQQ9 107 aa5.89□□□□□ -1.47
SHROOM3-207ENST00000485780 DLEU1O43261 78 aa5.89□□□□□ -1.47
SHROOM3-207ENST00000485780 COX8AP10176 69 aa5.89□□□□□ -1.47
SHROOM3-207ENST00000485780 NMUP48645 174 aa5.89□□□□□ -1.47
SHROOM3-207ENST00000485780 RPL18AQ02543 176 aaKnown RBP5.89□□□□□ -1.47
SHROOM3-207ENST00000485780 COX17Q14061 63 aa5.89□□□□□ -1.47
SHROOM3-207ENST00000485780 HERV-K104P63124 156 aa5.88□□□□□ -1.47
SHROOM3-207ENST00000485780 GAGE2BQ13066 116 aa5.88□□□□□ -1.47
SHROOM3-207ENST00000485780 SLC25A34Q6PIV7 304 aa5.88□□□□□ -1.47
SHROOM3-207ENST00000485780 NDUFA12Q9UI09 145 aa5.88□□□□□ -1.47
SHROOM3-207ENST00000485780 ERG28Q9UKR5 140 aa5.88□□□□□ -1.47
SHROOM3-207ENST00000485780 HNRNPA3P51991 378 aaKnown RBP5.87□□□□□ -1.47
SHROOM3-207ENST00000485780 ANKRD39Q53RE8 183 aa5.87□□□□□ -1.47
SHROOM3-207ENST00000485780 C9orf129Q5T035 196 aaKnown RBP5.87□□□□□ -1.47
SHROOM3-207ENST00000485780 BOD1L2Q8IYS8 172 aa5.87□□□□□ -1.47
SHROOM3-207ENST00000485780 STPG4Q8N801 248 aa5.87□□□□□ -1.47
SHROOM3-207ENST00000485780 PKHD1L1Q86WI1 4243 aa5.86□□□□□ -1.47
SHROOM3-207ENST00000485780 IGKV2D-26A0A0A0MRZ7 120 aa5.86□□□□□ -1.47
SHROOM3-207ENST00000485780 MYMXA0A1B0GTQ4 84 aa5.86□□□□□ -1.47
SHROOM3-207ENST00000485780 LGALS3P17931 250 aaKnown RBP5.86□□□□□ -1.47
SHROOM3-207ENST00000485780 KRTAP7-1Q8IUC3 87 aa5.86□□□□□ -1.47
SHROOM3-207ENST00000485780 A0A1W2PNN7 141 aa5.85□□□□□ -1.47
SHROOM3-207ENST00000485780 GAGE2EQ4V326 116 aa5.85□□□□□ -1.47
SHROOM3-207ENST00000485780 GAGE2DQ9UEU5 116 aa5.85□□□□□ -1.47
SHROOM3-207ENST00000485780 A0A1B0GV90 55 aa5.84□□□□□ -1.47
SHROOM3-207ENST00000485780 J3QL48 77 aa5.84□□□□□ -1.47
SHROOM3-207ENST00000485780 PFN2P35080 140 aa5.84□□□□□ -1.47
SHROOM3-207ENST00000485780 COL5A1-AS1Q5SY13 56 aa5.84□□□□□ -1.47
SHROOM3-207ENST00000485780 C2orf91Q6ZV80 131 aa5.84□□□□□ -1.47
SHROOM3-207ENST00000485780 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.47
SHROOM3-207ENST00000485780 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
SHROOM3-207ENST00000485780 IGLV5-37A0A075B6J1 123 aa5.83□□□□□ -1.48
SHROOM3-207ENST00000485780 LOC107984156A0A0G2JMH3 177 aa5.83□□□□□ -1.48
SHROOM3-207ENST00000485780 A0A0J9YXY3 114 aa5.83□□□□□ -1.48
SHROOM3-207ENST00000485780 FAM168BA1KXE4 195 aa5.83□□□□□ -1.48
SHROOM3-207ENST00000485780 KRTAP10-4P60372 401 aaPredicted RBP5.83□□□□□ -1.48
SHROOM3-207ENST00000485780 ARL17AQ8IVW1 177 aa5.83□□□□□ -1.48
SHROOM3-207ENST00000485780 DPH3Q96FX2 82 aa5.83□□□□□ -1.48
SHROOM3-207ENST00000485780 SND1-IT1Q9HBX3 110 aa5.83□□□□□ -1.48
SHROOM3-207ENST00000485780 XAGE1AQ9HD64 81 aa5.83□□□□□ -1.48
SHROOM3-207ENST00000485780 TIMM17BO60830 172 aa5.82□□□□□ -1.48
SHROOM3-207ENST00000485780 SMIM13P0DJ93 91 aa5.82□□□□□ -1.48
SHROOM3-207ENST00000485780 RPL37AP61513 92 aaKnown RBP5.82□□□□□ -1.48
SHROOM3-207ENST00000485780 BVES-AS1Q5T3Y7 98 aa5.82□□□□□ -1.48
SHROOM3-207ENST00000485780 SERTAD4-AS1Q5TG53 156 aa5.82□□□□□ -1.48
SHROOM3-207ENST00000485780 PCP2Q8IVA1 136 aa5.82□□□□□ -1.48
SHROOM3-207ENST00000485780 LITAFQ99732 161 aa5.82□□□□□ -1.48
SHROOM3-207ENST00000485780 TTTY13Q9BZ97 58 aa5.82□□□□□ -1.48
SHROOM3-207ENST00000485780 HIGD1BQ9P298 99 aa5.82□□□□□ -1.48
SHROOM3-207ENST00000485780 TP73-AS1Q9UF72 201 aa5.82□□□□□ -1.48
SHROOM3-207ENST00000485780 ZNF815PA8K554 130 aa5.81□□□□□ -1.48
SHROOM3-207ENST00000485780 LINC00158P58513 81 aa5.81□□□□□ -1.48
SHROOM3-207ENST00000485780 MEIG1Q5JSS6 88 aa5.81□□□□□ -1.48
SHROOM3-207ENST00000485780 MIR7-3HGQ8N6C7 128 aa5.81□□□□□ -1.48
SHROOM3-207ENST00000485780 DMBT1Q9UGM3 2413 aaPredicted RBP5.81□□□□□ -1.48
SHROOM3-207ENST00000485780 M0QXV9 152 aa5.8□□□□□ -1.48
SHROOM3-207ENST00000485780 VPREB1P12018 145 aa5.8□□□□□ -1.48
SHROOM3-207ENST00000485780 HINT1P49773 126 aaPredicted RBP5.8□□□□□ -1.48
SHROOM3-207ENST00000485780 FAM19A5Q7Z5A7 132 aaPredicted RBP5.8□□□□□ -1.48
SHROOM3-207ENST00000485780 Q8NDZ9 215 aa5.8□□□□□ -1.48
SHROOM3-207ENST00000485780 C7orf33Q8WU49 177 aa5.8□□□□□ -1.48
SHROOM3-207ENST00000485780 PHF5AQ7RTV0 110 aaKnown RBP5.79□□□□□ -1.48
SHROOM3-207ENST00000485780 LRP1Q07954 4544 aaKnown RBP5.78□□□□□ -1.48
SHROOM3-207ENST00000485780 FLG2Q5D862 2391 aaPredicted RBP5.78□□□□□ -1.48
SHROOM3-207ENST00000485780 A0A0U1RRA0 63 aa5.78□□□□□ -1.48
SHROOM3-207ENST00000485780 HSD52Q0P140 79 aa5.78□□□□□ -1.48
SHROOM3-207ENST00000485780 BATFQ16520 125 aa5.78□□□□□ -1.48
SHROOM3-207ENST00000485780 ADAMTSL4-AS1Q5T5F5 129 aa5.78□□□□□ -1.48
SHROOM3-207ENST00000485780 PPDPFQ9H3Y8 114 aa5.78□□□□□ -1.48
SHROOM3-207ENST00000485780 C22orf24Q9Y442 160 aa5.78□□□□□ -1.48
SHROOM3-207ENST00000485780 KRTAP29-1A8MX34 341 aaPredicted RBP5.77□□□□□ -1.49
SHROOM3-207ENST00000485780 PRR3P79522 188 aaKnown RBP5.77□□□□□ -1.49
SHROOM3-207ENST00000485780 SOSTDC1Q6X4U4 206 aa5.77□□□□□ -1.49
SHROOM3-207ENST00000485780 MRPL55Q7Z7F7 128 aaKnown RBP5.77□□□□□ -1.49
SHROOM3-207ENST00000485780 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
SHROOM3-207ENST00000485780 DAND5Q8N907 189 aa5.77□□□□□ -1.49
SHROOM3-207ENST00000485780 TMEM238C9JI98 176 aa5.76□□□□□ -1.49
SHROOM3-207ENST00000485780 TAX1BP3O14907 124 aa5.76□□□□□ -1.49
SHROOM3-207ENST00000485780 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
SHROOM3-207ENST00000485780 RPL24P83731 157 aaKnown RBP5.76□□□□□ -1.49
SHROOM3-207ENST00000485780 TAL2Q16559 108 aa5.76□□□□□ -1.49
SHROOM3-207ENST00000485780 SPANXDQ9BXN6 97 aa5.76□□□□□ -1.49
SHROOM3-207ENST00000485780 SPANXCQ9NY87 97 aa5.76□□□□□ -1.49
SHROOM3-207ENST00000485780 NDUFC2O95298 119 aa5.75□□□□□ -1.49
SHROOM3-207ENST00000485780 OXTP01178 125 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms