RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 S100A6P06703 90 aa7.29□□□□□ -1.24
CDK5RAP2-217ENST00000484546 SERTAD4-AS1Q5TG53 156 aa7.29□□□□□ -1.24
CDK5RAP2-217ENST00000484546 PET117Q6UWS5 81 aa7.29□□□□□ -1.24
CDK5RAP2-217ENST00000484546 NDUFA12Q9UI09 145 aa7.29□□□□□ -1.24
CDK5RAP2-217ENST00000484546 PSORS1C2Q9UIG4 136 aa7.29□□□□□ -1.24
CDK5RAP2-217ENST00000484546 C22orf24Q9Y442 160 aa7.29□□□□□ -1.24
CDK5RAP2-217ENST00000484546 A0A0U1RRA0 63 aa7.28□□□□□ -1.24
CDK5RAP2-217ENST00000484546 S100A2P29034 98 aa7.28□□□□□ -1.24
CDK5RAP2-217ENST00000484546 MRPL55Q7Z7F7 128 aaKnown RBP7.28□□□□□ -1.24
CDK5RAP2-217ENST00000484546 LRP1Q07954 4544 aaKnown RBP7.28□□□□□ -1.24
CDK5RAP2-217ENST00000484546 DMBT1Q9UGM3 2413 aaPredicted RBP7.27□□□□□ -1.25
CDK5RAP2-217ENST00000484546 J3QQQ9 107 aa7.27□□□□□ -1.25
CDK5RAP2-217ENST00000484546 RPL24P83731 157 aaKnown RBP7.27□□□□□ -1.25
CDK5RAP2-217ENST00000484546 SND1-IT1Q9HBX3 110 aa7.27□□□□□ -1.25
CDK5RAP2-217ENST00000484546 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
CDK5RAP2-217ENST00000484546 NMUP48645 174 aa7.26□□□□□ -1.25
CDK5RAP2-217ENST00000484546 SPINK6Q6UWN8 80 aa7.26□□□□□ -1.25
CDK5RAP2-217ENST00000484546 TP73-AS1Q9UF72 201 aa7.26□□□□□ -1.25
CDK5RAP2-217ENST00000484546 PLA2G2DQ9UNK4 145 aa7.26□□□□□ -1.25
CDK5RAP2-217ENST00000484546 KRTAP29-1A8MX34 341 aaPredicted RBP7.25□□□□□ -1.25
CDK5RAP2-217ENST00000484546 OXTP01178 125 aa7.25□□□□□ -1.25
CDK5RAP2-217ENST00000484546 SMIM13P0DJ93 91 aa7.25□□□□□ -1.25
CDK5RAP2-217ENST00000484546 LINC01545Q5VT33 79 aa7.25□□□□□ -1.25
CDK5RAP2-217ENST00000484546 REG3GQ6UW15 175 aa7.25□□□□□ -1.25
CDK5RAP2-217ENST00000484546 KRTAP7-1Q8IUC3 87 aa7.25□□□□□ -1.25
CDK5RAP2-217ENST00000484546 GAGE10A6NGK3 116 aa7.24□□□□□ -1.25
CDK5RAP2-217ENST00000484546 AKR1D1P51857 326 aa7.24□□□□□ -1.25
CDK5RAP2-217ENST00000484546 RPL37AP8A6NKH3 93 aa7.23□□□□□ -1.25
CDK5RAP2-217ENST00000484546 E9PLD3 99 aa7.23□□□□□ -1.25
CDK5RAP2-217ENST00000484546 IGLV7-43P04211 117 aa7.23□□□□□ -1.25
CDK5RAP2-217ENST00000484546 TSPEAR-AS2P59090 65 aa7.23□□□□□ -1.25
CDK5RAP2-217ENST00000484546 C4orf48Q5BLP8 95 aa7.23□□□□□ -1.25
CDK5RAP2-217ENST00000484546 MIR7-3HGQ8N6C7 128 aa7.23□□□□□ -1.25
CDK5RAP2-217ENST00000484546 MIEN1Q9BRT3 115 aa7.23□□□□□ -1.25
CDK5RAP2-217ENST00000484546 IGLV5-37A0A075B6J1 123 aa7.22□□□□□ -1.25
CDK5RAP2-217ENST00000484546 LOC105371267A0A1B0GV96 52 aa7.22□□□□□ -1.25
CDK5RAP2-217ENST00000484546 LINC00167Q96N53 147 aa7.22□□□□□ -1.25
CDK5RAP2-217ENST00000484546 KRTAP11-1Q8IUC1 163 aa7.21□□□□□ -1.26
CDK5RAP2-217ENST00000484546 BOD1L2Q8IYS8 172 aa7.21□□□□□ -1.26
CDK5RAP2-217ENST00000484546 DIRC1Q969H9 104 aa7.21□□□□□ -1.26
CDK5RAP2-217ENST00000484546 IGKV2-28A0A075B6P5 120 aa7.2□□□□□ -1.26
CDK5RAP2-217ENST00000484546 IGKV2D-28P01615 120 aa7.2□□□□□ -1.26
CDK5RAP2-217ENST00000484546 VPREB1P12018 145 aa7.2□□□□□ -1.26
CDK5RAP2-217ENST00000484546 HIST3H2BBQ8N257 126 aa7.2□□□□□ -1.26
CDK5RAP2-217ENST00000484546 SRSF9Q13242 221 aaKnown RBP eCLIP7.19□□□□□ -1.26
CDK5RAP2-217ENST00000484546 ZNF815PA8K554 130 aa7.18□□□□□ -1.26
CDK5RAP2-217ENST00000484546 BCE1O60756 84 aa7.18□□□□□ -1.26
CDK5RAP2-217ENST00000484546 RPL28P46779 137 aaKnown RBP7.18□□□□□ -1.26
CDK5RAP2-217ENST00000484546 UBE2AP49459 152 aa7.18□□□□□ -1.26
CDK5RAP2-217ENST00000484546 S100A12P80511 92 aa7.18□□□□□ -1.26
CDK5RAP2-217ENST00000484546 ATOH7Q8N100 152 aa7.18□□□□□ -1.26
CDK5RAP2-217ENST00000484546 DAND5Q8N907 189 aa7.18□□□□□ -1.26
CDK5RAP2-217ENST00000484546 HIST1H2BLQ99880 126 aa7.18□□□□□ -1.26
CDK5RAP2-217ENST00000484546 A0A0J9YXY3 114 aa7.17□□□□□ -1.26
CDK5RAP2-217ENST00000484546 HSBP1L1C9JCN9 74 aa7.17□□□□□ -1.26
CDK5RAP2-217ENST00000484546 M0R378 163 aa7.17□□□□□ -1.26
CDK5RAP2-217ENST00000484546 NCR3O14931 201 aa7.17□□□□□ -1.26
CDK5RAP2-217ENST00000484546 SNRPEP62304 92 aaKnown RBP7.17□□□□□ -1.26
CDK5RAP2-217ENST00000484546 H0Y9J4 135 aa7.16□□□□□ -1.26
CDK5RAP2-217ENST00000484546 ZNF861PO60384 105 aa7.16□□□□□ -1.26
CDK5RAP2-217ENST00000484546 SCGB1D4Q6XE38 83 aa7.16□□□□□ -1.26
CDK5RAP2-217ENST00000484546 IGLV1-50A0A075B6I6 118 aa7.15□□□□□ -1.26
CDK5RAP2-217ENST00000484546 IGKV2D-26A0A0A0MRZ7 120 aa7.15□□□□□ -1.26
CDK5RAP2-217ENST00000484546 NPC2P61916 151 aa7.15□□□□□ -1.26
CDK5RAP2-217ENST00000484546 C5orf52A6NGY3 159 aa7.14□□□□□ -1.27
CDK5RAP2-217ENST00000484546 FAM19A1Q7Z5A9 133 aa7.14□□□□□ -1.27
CDK5RAP2-217ENST00000484546 Q8NDZ9 215 aa7.14□□□□□ -1.27
CDK5RAP2-217ENST00000484546 LINC01600Q96MT4 127 aa7.14□□□□□ -1.27
CDK5RAP2-217ENST00000484546 TMEM238C9JI98 176 aa7.13□□□□□ -1.27
CDK5RAP2-217ENST00000484546 TIMM17BO60830 172 aa7.13□□□□□ -1.27
CDK5RAP2-217ENST00000484546 SCGB1D1O95968 90 aa7.13□□□□□ -1.27
CDK5RAP2-217ENST00000484546 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
CDK5RAP2-217ENST00000484546 TMEM126AQ9H061 195 aa7.13□□□□□ -1.27
CDK5RAP2-217ENST00000484546 SPANXB1Q9NS25 103 aaPredicted RBP7.13□□□□□ -1.27
CDK5RAP2-217ENST00000484546 ANKRD39Q53RE8 183 aa7.12□□□□□ -1.27
CDK5RAP2-217ENST00000484546 S100A7L2Q5SY68 101 aa7.12□□□□□ -1.27
CDK5RAP2-217ENST00000484546 TTTY13Q9BZ97 58 aa7.12□□□□□ -1.27
CDK5RAP2-217ENST00000484546 LOC107984156A0A0G2JMH3 177 aa7.11□□□□□ -1.27
CDK5RAP2-217ENST00000484546 LOC100996750A0A140TA64 210 aa7.11□□□□□ -1.27
CDK5RAP2-217ENST00000484546 PRYO14603 147 aa7.11□□□□□ -1.27
CDK5RAP2-217ENST00000484546 LORP23490 312 aaPredicted RBP7.11□□□□□ -1.27
CDK5RAP2-217ENST00000484546 ADAMTSL4-AS1Q5T5F5 129 aa7.11□□□□□ -1.27
CDK5RAP2-217ENST00000484546 ARL17AQ8IVW1 177 aa7.11□□□□□ -1.27
CDK5RAP2-217ENST00000484546 COPS9Q8WXC6 57 aa7.11□□□□□ -1.27
CDK5RAP2-217ENST00000484546 KRTAP4-6Q9BYQ5 205 aa7.11□□□□□ -1.27
CDK5RAP2-217ENST00000484546 HMCN2Q8NDA2 5059 aa7.11□□□□□ -1.27
CDK5RAP2-217ENST00000484546 TRBV10-3A0A0K0K1G6 114 aa7.1□□□□□ -1.27
CDK5RAP2-217ENST00000484546 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
CDK5RAP2-217ENST00000484546 NDUFC2O95298 119 aa7.1□□□□□ -1.27
CDK5RAP2-217ENST00000484546 DDTP30046 118 aa7.1□□□□□ -1.27
CDK5RAP2-217ENST00000484546 PRLHP81277 87 aa7.1□□□□□ -1.27
CDK5RAP2-217ENST00000484546 TNXBP22105 4242 aa7.1□□□□□ -1.27
CDK5RAP2-217ENST00000484546 ETDCA0A1B0GVM5 59 aa7.09□□□□□ -1.27
CDK5RAP2-217ENST00000484546 LINC00308Q8TCZ7 52 aa7.09□□□□□ -1.27
CDK5RAP2-217ENST00000484546 CBY1Q9Y3M2 126 aa7.09□□□□□ -1.27
CDK5RAP2-217ENST00000484546 LITAFQ99732 161 aa7.08□□□□□ -1.28
CDK5RAP2-217ENST00000484546 HIGD2AQ9BW72 106 aa7.08□□□□□ -1.28
CDK5RAP2-217ENST00000484546 SPANXCQ9NY87 97 aa7.08□□□□□ -1.28
CDK5RAP2-217ENST00000484546 RPL13AP40429 203 aaKnown RBP7.07□□□□□ -1.28
CDK5RAP2-217ENST00000484546 SOSTDC1Q6X4U4 206 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms