RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 Q6Q795 121 aa4.98□□□□□ -1.61
SHROOM3-206ENST00000484236 Q6ZTC4 211 aa4.98□□□□□ -1.61
SHROOM3-206ENST00000484236 C11orf45Q8TAV5 145 aa4.98□□□□□ -1.61
SHROOM3-206ENST00000484236 RETNQ9HD89 108 aa4.98□□□□□ -1.61
SHROOM3-206ENST00000484236 DEFB131BA0A096LNP1 70 aa4.97□□□□□ -1.61
SHROOM3-206ENST00000484236 CYSRT1A8MQ03 144 aa4.97□□□□□ -1.61
SHROOM3-206ENST00000484236 C2orf48Q96LS8 159 aa4.97□□□□□ -1.61
SHROOM3-206ENST00000484236 LINC00167Q96N53 147 aa4.97□□□□□ -1.61
SHROOM3-206ENST00000484236 A0A087WYN8 130 aa4.96□□□□□ -1.62
SHROOM3-206ENST00000484236 NANOS2P60321 138 aaKnown RBP4.96□□□□□ -1.62
SHROOM3-206ENST00000484236 ESRGQ1W209 222 aa4.96□□□□□ -1.62
SHROOM3-206ENST00000484236 KRTAP26-1Q6PEX3 210 aa4.96□□□□□ -1.62
SHROOM3-206ENST00000484236 UNQ6190/PRO20217Q6UXQ8 127 aa4.96□□□□□ -1.62
SHROOM3-206ENST00000484236 WFDC10BQ8IUB3 73 aa4.96□□□□□ -1.62
SHROOM3-206ENST00000484236 C15orf53Q8NAA6 179 aa4.96□□□□□ -1.62
SHROOM3-206ENST00000484236 OBSCN-AS1Q96MR7 158 aa4.96□□□□□ -1.62
SHROOM3-206ENST00000484236 ORMDL1Q9P0S3 153 aa4.96□□□□□ -1.62
SHROOM3-206ENST00000484236 C22orf24Q9Y442 160 aa4.96□□□□□ -1.62
SHROOM3-206ENST00000484236 TRAV10A0A0B4J240 114 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 H3BQ85 93 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 ZNF561-AS1K7EIQ3 104 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 LECT2O14960 151 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 GAGE2BQ13066 116 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 GAGE2EQ4V326 116 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 C9orf116Q5BN46 136 aaPredicted RBP4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 S100A7L2Q5SY68 101 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 C10orf25Q5T742 122 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 C6orf223Q8N319 242 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 C1orf43Q9BWL3 253 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 Q9HAA7 133 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 GAGE2DQ9UEU5 116 aa4.95□□□□□ -1.62
SHROOM3-206ENST00000484236 A0A1B0GV72 72 aa4.94□□□□□ -1.62
SHROOM3-206ENST00000484236 IGLV6-57P01721 117 aa4.94□□□□□ -1.62
SHROOM3-206ENST00000484236 DNAH10OSP0CZ25 163 aa4.94□□□□□ -1.62
SHROOM3-206ENST00000484236 Q8N814 137 aa4.94□□□□□ -1.62
SHROOM3-206ENST00000484236 TM2D3Q9BRN9 247 aa4.94□□□□□ -1.62
SHROOM3-206ENST00000484236 C6orf48Q9UBA6 75 aa4.94□□□□□ -1.62
SHROOM3-206ENST00000484236 TRBV7-7A0A0K0K1E9 115 aa4.93□□□□□ -1.62
SHROOM3-206ENST00000484236 JMJD7-PLA2G4BH0Y9G9 81 aa4.93□□□□□ -1.62
SHROOM3-206ENST00000484236 TMEM256-PLSCR3K7ERE1 68 aa4.93□□□□□ -1.62
SHROOM3-206ENST00000484236 PRR3P79522 188 aaKnown RBP4.93□□□□□ -1.62
SHROOM3-206ENST00000484236 SDIM1Q6ZPB5 146 aa4.93□□□□□ -1.62
SHROOM3-206ENST00000484236 LINC00643Q86TS7 51 aa4.93□□□□□ -1.62
SHROOM3-206ENST00000484236 CAMK2N2Q96S95 79 aa4.93□□□□□ -1.62
SHROOM3-206ENST00000484236 IMUPQ9GZP8 106 aa4.93□□□□□ -1.62
SHROOM3-206ENST00000484236 TRBV7-6A0A0J9YX20 115 aa4.92□□□□□ -1.62
SHROOM3-206ENST00000484236 NCR3O14931 201 aa4.92□□□□□ -1.62
SHROOM3-206ENST00000484236 GHRHP01286 108 aa4.92□□□□□ -1.62
SHROOM3-206ENST00000484236 NDUFC2-KCTD14E9PQ53 114 aa4.91□□□□□ -1.62
SHROOM3-206ENST00000484236 C6orf99Q4VX62 202 aa4.91□□□□□ -1.62
SHROOM3-206ENST00000484236 LINC00575Q6W349 94 aa4.91□□□□□ -1.62
SHROOM3-206ENST00000484236 C15orf56Q8N910 161 aa4.91□□□□□ -1.62
SHROOM3-206ENST00000484236 LINC00526Q96FQ7 95 aa4.91□□□□□ -1.62
SHROOM3-206ENST00000484236 IGKV2D-24A0A075B6R9 120 aa4.9□□□□□ -1.63
SHROOM3-206ENST00000484236 hADV29S1A0JD25 119 aa4.9□□□□□ -1.63
SHROOM3-206ENST00000484236 TTC32Q5I0X7 151 aa4.9□□□□□ -1.63
SHROOM3-206ENST00000484236 Q8NDZ9 215 aa4.9□□□□□ -1.63
SHROOM3-206ENST00000484236 RMI2Q96E14 147 aa4.9□□□□□ -1.63
SHROOM3-206ENST00000484236 STAB1Q9NY15 2570 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 FLNBO75369 2602 aaKnown RBP4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 TRAV23DV6A0A075B6W5 121 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 K7EIL1 84 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 M0R378 163 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 TLX1NBP0CAT3 122 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 VPREB1P12018 145 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 RPL18AQ02543 176 aaKnown RBP4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 SYCNQ0VAF6 134 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 HIGD2BQ4VC39 106 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 GAGE2AQ6NT46 116 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 Q6ZRU5 148 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 DIRC1Q969H9 104 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 UPK3BQ9BT76 320 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 TRRAPQ9Y4A5 3859 aa4.89□□□□□ -1.63
SHROOM3-206ENST00000484236 MAST4O15021 2626 aa4.88□□□□□ -1.63
SHROOM3-206ENST00000484236 TRBV10-3A0A0K0K1G6 114 aa4.88□□□□□ -1.63
SHROOM3-206ENST00000484236 SLPIP03973 132 aa4.88□□□□□ -1.63
SHROOM3-206ENST00000484236 CCKP06307 115 aa4.88□□□□□ -1.63
SHROOM3-206ENST00000484236 TNP2Q05952 138 aa4.88□□□□□ -1.63
SHROOM3-206ENST00000484236 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
SHROOM3-206ENST00000484236 XAGE1AQ9HD64 81 aa4.88□□□□□ -1.63
SHROOM3-206ENST00000484236 C14orf132Q9NPU4 83 aa4.88□□□□□ -1.63
SHROOM3-206ENST00000484236 LINC00588Q9Y4M8 146 aa4.88□□□□□ -1.63
SHROOM3-206ENST00000484236 ZNF73O43830 326 aaPredicted RBP4.87□□□□□ -1.63
SHROOM3-206ENST00000484236 COX7BP24311 80 aa4.87□□□□□ -1.63
SHROOM3-206ENST00000484236 NDUFV3P56181 108 aaKnown RBP4.87□□□□□ -1.63
SHROOM3-206ENST00000484236 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.87□□□□□ -1.63
SHROOM3-206ENST00000484236 SMCR5Q8TEV8 140 aa4.87□□□□□ -1.63
SHROOM3-206ENST00000484236 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
SHROOM3-206ENST00000484236 PLA2G2DQ9UNK4 145 aa4.87□□□□□ -1.63
SHROOM3-206ENST00000484236 PDE6GP18545 87 aa4.86□□□□□ -1.63
SHROOM3-206ENST00000484236 ELOF1P60002 83 aaKnown RBP4.86□□□□□ -1.63
SHROOM3-206ENST00000484236 C9orf129Q5T035 196 aaKnown RBP4.86□□□□□ -1.63
SHROOM3-206ENST00000484236 Q6JHZ5 121 aa4.86□□□□□ -1.63
SHROOM3-206ENST00000484236 MRAPQ8TCY5 172 aa4.86□□□□□ -1.63
SHROOM3-206ENST00000484236 DNAH3Q8TD57 4116 aa4.86□□□□□ -1.63
SHROOM3-206ENST00000484236 BAHCC1Q9P281 2608 aa4.85□□□□□ -1.63
SHROOM3-206ENST00000484236 FBN1P35555 2871 aaKnown RBP4.85□□□□□ -1.63
SHROOM3-206ENST00000484236 LOC110117498A0A087WWA1 95 aa4.85□□□□□ -1.63
SHROOM3-206ENST00000484236 RBM3P98179 157 aaKnown RBP4.85□□□□□ -1.63
SHROOM3-206ENST00000484236 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms