RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 C9orf163Q8N9P6 203 aa5.86□□□□□ -1.47
SHROOM4-204ENST00000483955 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
SHROOM4-204ENST00000483955 ERG28Q9UKR5 140 aa5.86□□□□□ -1.47
SHROOM4-204ENST00000483955 A0A0J9YXY3 114 aa5.85□□□□□ -1.47
SHROOM4-204ENST00000483955 LOC107984640A0A0U1RRK4 108 aa5.85□□□□□ -1.47
SHROOM4-204ENST00000483955 NDUFC2-KCTD14E9PQ53 114 aa5.85□□□□□ -1.47
SHROOM4-204ENST00000483955 TIMM17BO60830 172 aa5.85□□□□□ -1.47
SHROOM4-204ENST00000483955 TLX1NBP0CAT3 122 aa5.85□□□□□ -1.47
SHROOM4-204ENST00000483955 LINC00518Q8N0U6 118 aa5.85□□□□□ -1.47
SHROOM4-204ENST00000483955 C14orf144Q96I85 54 aa5.85□□□□□ -1.47
SHROOM4-204ENST00000483955 TTTY13Q9BZ97 58 aa5.85□□□□□ -1.47
SHROOM4-204ENST00000483955 PFN2P35080 140 aa5.84□□□□□ -1.47
SHROOM4-204ENST00000483955 RPL18AQ02543 176 aaKnown RBP5.84□□□□□ -1.47
SHROOM4-204ENST00000483955 UQCR10Q9UDW1 63 aa5.84□□□□□ -1.47
SHROOM4-204ENST00000483955 KMT2CQ8NEZ4 4911 aaKnown RBP5.83□□□□□ -1.48
SHROOM4-204ENST00000483955 TSTD3H0UI37 97 aa5.83□□□□□ -1.48
SHROOM4-204ENST00000483955 SMIM13P0DJ93 91 aa5.83□□□□□ -1.48
SHROOM4-204ENST00000483955 LINC00158P58513 81 aa5.83□□□□□ -1.48
SHROOM4-204ENST00000483955 C9orf116Q5BN46 136 aaPredicted RBP5.83□□□□□ -1.48
SHROOM4-204ENST00000483955 KRTAP4-5Q9BYR2 181 aa5.83□□□□□ -1.48
SHROOM4-204ENST00000483955 RYR2Q92736 4967 aa5.82□□□□□ -1.48
SHROOM4-204ENST00000483955 A0A1B0GVY2 172 aa5.82□□□□□ -1.48
SHROOM4-204ENST00000483955 C16orf90A8MZG2 172 aa5.82□□□□□ -1.48
SHROOM4-204ENST00000483955 KRTAP10-2P60368 255 aa5.82□□□□□ -1.48
SHROOM4-204ENST00000483955 Q6ZVH6 145 aa5.82□□□□□ -1.48
SHROOM4-204ENST00000483955 COPS9Q8WXC6 57 aa5.82□□□□□ -1.48
SHROOM4-204ENST00000483955 MIEN1Q9BRT3 115 aa5.82□□□□□ -1.48
SHROOM4-204ENST00000483955 SPANXB1Q9NS25 103 aaPredicted RBP5.82□□□□□ -1.48
SHROOM4-204ENST00000483955 HIGD1BQ9P298 99 aa5.82□□□□□ -1.48
SHROOM4-204ENST00000483955 LINC00474Q9P2X8 69 aa5.82□□□□□ -1.48
SHROOM4-204ENST00000483955 FAT2Q9NYQ8 4349 aa5.81□□□□□ -1.48
SHROOM4-204ENST00000483955 LCE4AQ5TA78 99 aa5.81□□□□□ -1.48
SHROOM4-204ENST00000483955 MIR7-3HGQ8N6C7 128 aa5.81□□□□□ -1.48
SHROOM4-204ENST00000483955 SPANXDQ9BXN6 97 aa5.81□□□□□ -1.48
SHROOM4-204ENST00000483955 SPANXCQ9NY87 97 aa5.81□□□□□ -1.48
SHROOM4-204ENST00000483955 HNRNPA3P51991 378 aaKnown RBP5.8□□□□□ -1.48
SHROOM4-204ENST00000483955 Q6ZRP5 223 aa5.8□□□□□ -1.48
SHROOM4-204ENST00000483955 LITAFQ99732 161 aa5.8□□□□□ -1.48
SHROOM4-204ENST00000483955 PRO1933Q9H354 126 aa5.8□□□□□ -1.48
SHROOM4-204ENST00000483955 TP73-AS1Q9UF72 201 aa5.8□□□□□ -1.48
SHROOM4-204ENST00000483955 A0A096LNI7 61 aa5.79□□□□□ -1.48
SHROOM4-204ENST00000483955 IFITM1P13164 125 aa5.79□□□□□ -1.48
SHROOM4-204ENST00000483955 SRSF9Q13242 221 aaKnown RBP eCLIP5.79□□□□□ -1.48
SHROOM4-204ENST00000483955 SDIM1Q6ZPB5 146 aa5.79□□□□□ -1.48
SHROOM4-204ENST00000483955 C2orf91Q6ZV80 131 aa5.79□□□□□ -1.48
SHROOM4-204ENST00000483955 PPDPFQ9H3Y8 114 aa5.79□□□□□ -1.48
SHROOM4-204ENST00000483955 SND1-IT1Q9HBX3 110 aa5.79□□□□□ -1.48
SHROOM4-204ENST00000483955 IGKV2-24A0A0C4DH68 120 aa5.78□□□□□ -1.48
SHROOM4-204ENST00000483955 FUSP35637 526 aaKnown RBP eCLIP5.78□□□□□ -1.48
SHROOM4-204ENST00000483955 TAL2Q16559 108 aa5.78□□□□□ -1.48
SHROOM4-204ENST00000483955 DAND5Q8N907 189 aa5.78□□□□□ -1.48
SHROOM4-204ENST00000483955 HIST1H4GQ99525 98 aa5.78□□□□□ -1.48
SHROOM4-204ENST00000483955 LOC107984156A0A0G2JMH3 177 aa5.77□□□□□ -1.49
SHROOM4-204ENST00000483955 ADAMTSL4-AS1Q5T5F5 129 aa5.77□□□□□ -1.49
SHROOM4-204ENST00000483955 ARL17AQ8IVW1 177 aa5.77□□□□□ -1.49
SHROOM4-204ENST00000483955 SPACA4Q8TDM5 124 aa5.77□□□□□ -1.49
SHROOM4-204ENST00000483955 XAGE1AQ9HD64 81 aa5.77□□□□□ -1.49
SHROOM4-204ENST00000483955 NPC2P61916 151 aa5.76□□□□□ -1.49
SHROOM4-204ENST00000483955 RPL24P83731 157 aaKnown RBP5.76□□□□□ -1.49
SHROOM4-204ENST00000483955 HSD52Q0P140 79 aa5.76□□□□□ -1.49
SHROOM4-204ENST00000483955 C5orf47Q569G3 176 aa5.76□□□□□ -1.49
SHROOM4-204ENST00000483955 C9orf129Q5T035 196 aaKnown RBP5.76□□□□□ -1.49
SHROOM4-204ENST00000483955 LINC00308Q8TCZ7 52 aa5.76□□□□□ -1.49
SHROOM4-204ENST00000483955 DNAH11Q96DT5 4516 aa5.76□□□□□ -1.49
SHROOM4-204ENST00000483955 NDUFC2O95298 119 aa5.75□□□□□ -1.49
SHROOM4-204ENST00000483955 CHTF8P0CG12 524 aa5.75□□□□□ -1.49
SHROOM4-204ENST00000483955 KRTAP10-1P60331 282 aa5.75□□□□□ -1.49
SHROOM4-204ENST00000483955 Q6ZSA8 131 aa5.75□□□□□ -1.49
SHROOM4-204ENST00000483955 HECTD4Q9Y4D8 3996 aa5.75□□□□□ -1.49
SHROOM4-204ENST00000483955 C9orf118A6NHY6 69 aa5.74□□□□□ -1.49
SHROOM4-204ENST00000483955 SOSTDC1Q6X4U4 206 aa5.74□□□□□ -1.49
SHROOM4-204ENST00000483955 MUSTN1Q8IVN3 82 aa5.74□□□□□ -1.49
SHROOM4-204ENST00000483955 CEND1Q8N111 149 aa5.74□□□□□ -1.49
SHROOM4-204ENST00000483955 DPH3Q96FX2 82 aa5.74□□□□□ -1.49
SHROOM4-204ENST00000483955 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.74□□□□□ -1.49
SHROOM4-204ENST00000483955 IGLV5-37A0A075B6J1 123 aa5.73□□□□□ -1.49
SHROOM4-204ENST00000483955 M0R143 59 aa5.73□□□□□ -1.49
SHROOM4-204ENST00000483955 DDTP30046 118 aa5.73□□□□□ -1.49
SHROOM4-204ENST00000483955 FAM19A5Q7Z5A7 132 aaPredicted RBP5.73□□□□□ -1.49
SHROOM4-204ENST00000483955 NKAPP1Q8N9T2 125 aa5.73□□□□□ -1.49
SHROOM4-204ENST00000483955 PKD1P98161 4303 aa5.72□□□□□ -1.49
SHROOM4-204ENST00000483955 A0A087WYN8 130 aa5.72□□□□□ -1.49
SHROOM4-204ENST00000483955 TRBV10-2A0A0K0K1G8 114 aa5.72□□□□□ -1.49
SHROOM4-204ENST00000483955 M0QXV9 152 aa5.72□□□□□ -1.49
SHROOM4-204ENST00000483955 RPL13AP40429 203 aaKnown RBP5.72□□□□□ -1.49
SHROOM4-204ENST00000483955 DNAH5Q8TE73 4624 aa5.71□□□□□ -1.49
SHROOM4-204ENST00000483955 RYR3Q15413 4870 aa5.71□□□□□ -1.49
SHROOM4-204ENST00000483955 FAM168BA1KXE4 195 aa5.71□□□□□ -1.5
SHROOM4-204ENST00000483955 EPM2AB3EWF7 344 aa5.71□□□□□ -1.5
SHROOM4-204ENST00000483955 PANO1I0J062 215 aa5.71□□□□□ -1.5
SHROOM4-204ENST00000483955 PLAC8Q9NZF1 115 aa5.71□□□□□ -1.5
SHROOM4-204ENST00000483955 TRAV13-2A0A0B4J235 113 aa5.7□□□□□ -1.5
SHROOM4-204ENST00000483955 A0A1W2PNN7 141 aa5.7□□□□□ -1.5
SHROOM4-204ENST00000483955 M0R378 163 aa5.7□□□□□ -1.5
SHROOM4-204ENST00000483955 NCR3O14931 201 aa5.7□□□□□ -1.5
SHROOM4-204ENST00000483955 SCXQ7RTU7 201 aa5.7□□□□□ -1.5
SHROOM4-204ENST00000483955 MRPL55Q7Z7F7 128 aaKnown RBP5.7□□□□□ -1.5
SHROOM4-204ENST00000483955 C22orf24Q9Y442 160 aa5.7□□□□□ -1.5
SHROOM4-204ENST00000483955 A0A0B4J2C4 111 aa5.69□□□□□ -1.5
SHROOM4-204ENST00000483955 FXYD2P54710 66 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms