RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 HSPB8Q9UJY1 196 aa8.1□□□□□ -1.11
VARS-226ENST00000483275 IGKV2-28A0A075B6P5 120 aa8.09□□□□□ -1.11
VARS-226ENST00000483275 IGKV2D-28P01615 120 aa8.09□□□□□ -1.11
VARS-226ENST00000483275 UBE2AP49459 152 aa8.09□□□□□ -1.11
VARS-226ENST00000483275 KRTAP13-1Q8IUC0 172 aa8.09□□□□□ -1.11
VARS-226ENST00000483275 FABP4P15090 132 aa8.07□□□□□ -1.12
VARS-226ENST00000483275 PRLHP81277 87 aa8.07□□□□□ -1.12
VARS-226ENST00000483275 LINC00304Q8N9R0 145 aa8.07□□□□□ -1.12
VARS-226ENST00000483275 MUC17Q685J3 4493 aa8.07□□□□□ -1.12
VARS-226ENST00000483275 IGLV5-39A0A0G2JS06 123 aa8.06□□□□□ -1.12
VARS-226ENST00000483275 SFTA2Q6UW10 78 aa8.06□□□□□ -1.12
VARS-226ENST00000483275 NKAPP1Q8N9T2 125 aa8.06□□□□□ -1.12
VARS-226ENST00000483275 LINC00310P59036 64 aa8.05□□□□□ -1.12
VARS-226ENST00000483275 IGLV5-37A0A075B6J1 123 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 TMEM223A0PJW6 202 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 TMEM238C9JI98 176 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 HIST1H2BKO60814 126 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 HIST1H2BJP06899 126 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 S100A1P23297 94 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 HIST1H2BOP23527 126 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 HIST1H2BBP33778 126 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 HIST1H2BDP58876 126 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 HIST1H2BCP62807 126 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 HIST2H2BEQ16778 126 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.04□□□□□ -1.12
VARS-226ENST00000483275 HIST1H2BHQ93079 126 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 HIST1H2BNQ99877 126 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 HIST1H2BMQ99879 126 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 MAP1LC3CQ9BXW4 147 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 CDIP1Q9H305 208 aa8.04□□□□□ -1.12
VARS-226ENST00000483275 PFN2P35080 140 aa8.03□□□□□ -1.12
VARS-226ENST00000483275 IGLV7-46A0A075B6I9 117 aa8.02□□□□□ -1.13
VARS-226ENST00000483275 PLNP26678 52 aa8.02□□□□□ -1.13
VARS-226ENST00000483275 FAM229BQ4G0N7 80 aa8.02□□□□□ -1.13
VARS-226ENST00000483275 C3orf22Q8N5N4 141 aa8.02□□□□□ -1.13
VARS-226ENST00000483275 ZNF625Q96I27 306 aaPredicted RBP8.02□□□□□ -1.13
VARS-226ENST00000483275 ERG28Q9UKR5 140 aa8.02□□□□□ -1.13
VARS-226ENST00000483275 IGKV2D-26A0A0A0MRZ7 120 aa8.01□□□□□ -1.13
VARS-226ENST00000483275 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
VARS-226ENST00000483275 DPM2O94777 84 aa8.01□□□□□ -1.13
VARS-226ENST00000483275 HERVK_113P61574 105 aa8.01□□□□□ -1.13
VARS-226ENST00000483275 COX17Q14061 63 aa8.01□□□□□ -1.13
VARS-226ENST00000483275 FAM19A1Q7Z5A9 133 aa8.01□□□□□ -1.13
VARS-226ENST00000483275 Q8NDZ9 215 aa8.01□□□□□ -1.13
VARS-226ENST00000483275 ATP6V1G1O75348 118 aa8□□□□□ -1.13
VARS-226ENST00000483275 TPRXLQ17RH7 258 aa8□□□□□ -1.13
VARS-226ENST00000483275 IGKCP01834 107 aa7.99□□□□□ -1.13
VARS-226ENST00000483275 VPREB1P12018 145 aa7.99□□□□□ -1.13
VARS-226ENST00000483275 TMEM126AQ9H061 195 aa7.99□□□□□ -1.13
VARS-226ENST00000483275 LINC00158P58513 81 aa7.98□□□□□ -1.13
VARS-226ENST00000483275 MEIG1Q5JSS6 88 aa7.98□□□□□ -1.13
VARS-226ENST00000483275 PMCHL2Q9BQD1 86 aa7.98□□□□□ -1.13
VARS-226ENST00000483275 SND1-IT1Q9HBX3 110 aa7.98□□□□□ -1.13
VARS-226ENST00000483275 MYMXA0A1B0GTQ4 84 aa7.97□□□□□ -1.13
VARS-226ENST00000483275 LINC00587B1AMM8 73 aa7.97□□□□□ -1.13
VARS-226ENST00000483275 M0R378 163 aa7.97□□□□□ -1.13
VARS-226ENST00000483275 HERV-K104P63124 156 aa7.97□□□□□ -1.13
VARS-226ENST00000483275 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
VARS-226ENST00000483275 LEPROTO15243 131 aa7.96□□□□□ -1.14
VARS-226ENST00000483275 RPL24P83731 157 aaKnown RBP7.96□□□□□ -1.14
VARS-226ENST00000483275 PPDPFQ9H3Y8 114 aa7.96□□□□□ -1.14
VARS-226ENST00000483275 NDUFA12Q9UI09 145 aa7.96□□□□□ -1.14
VARS-226ENST00000483275 A0A0U1RRA0 63 aa7.95□□□□□ -1.14
VARS-226ENST00000483275 SYS1-DBNDD2H3BUS1 97 aa7.95□□□□□ -1.14
VARS-226ENST00000483275 LGALS3P17931 250 aaKnown RBP7.95□□□□□ -1.14
VARS-226ENST00000483275 HIGD2AQ9BW72 106 aa7.95□□□□□ -1.14
VARS-226ENST00000483275 PET117Q6UWS5 81 aa7.94□□□□□ -1.14
VARS-226ENST00000483275 J3QQQ9 107 aa7.93□□□□□ -1.14
VARS-226ENST00000483275 SMIM13P0DJ93 91 aa7.93□□□□□ -1.14
VARS-226ENST00000483275 COA6Q5JTJ3 125 aaKnown RBP7.93□□□□□ -1.14
VARS-226ENST00000483275 NMUP48645 174 aa7.92□□□□□ -1.14
VARS-226ENST00000483275 C20orf202A1L168 122 aa7.91□□□□□ -1.14
VARS-226ENST00000483275 KRTDAPP60985 99 aa7.91□□□□□ -1.14
VARS-226ENST00000483275 DAND5Q8N907 189 aa7.91□□□□□ -1.14
VARS-226ENST00000483275 LINC01545Q5VT33 79 aa7.9□□□□□ -1.14
VARS-226ENST00000483275 MIR7-3HGQ8N6C7 128 aa7.9□□□□□ -1.14
VARS-226ENST00000483275 SPRR4Q96PI1 79 aa7.9□□□□□ -1.14
VARS-226ENST00000483275 E9PLD3 99 aa7.89□□□□□ -1.15
VARS-226ENST00000483275 C3orf79P0CE67 100 aa7.89□□□□□ -1.15
VARS-226ENST00000483275 TSPEAR-AS2P59090 65 aa7.89□□□□□ -1.15
VARS-226ENST00000483275 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
VARS-226ENST00000483275 S100A6P06703 90 aa7.88□□□□□ -1.15
VARS-226ENST00000483275 S100A2P29034 98 aa7.88□□□□□ -1.15
VARS-226ENST00000483275 BOD1L2Q8IYS8 172 aa7.88□□□□□ -1.15
VARS-226ENST00000483275 Q8NBF4 154 aa7.88□□□□□ -1.15
VARS-226ENST00000483275 AKR1D1P51857 326 aa7.87□□□□□ -1.15
VARS-226ENST00000483275 KRTAP13-3Q3SY46 172 aa7.87□□□□□ -1.15
VARS-226ENST00000483275 MIEN1Q9BRT3 115 aa7.87□□□□□ -1.15
VARS-226ENST00000483275 NCR3O14931 201 aa7.85□□□□□ -1.15
VARS-226ENST00000483275 LINC00337Q8N6G1 96 aa7.85□□□□□ -1.15
VARS-226ENST00000483275 S100A12P80511 92 aa7.84□□□□□ -1.15
VARS-226ENST00000483275 FSIP2Q5CZC0 6907 aa7.83□□□□□ -1.16
VARS-226ENST00000483275 A0A0J9YXY3 114 aa7.83□□□□□ -1.16
VARS-226ENST00000483275 CTAG1AP78358 180 aa7.83□□□□□ -1.16
VARS-226ENST00000483275 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
VARS-226ENST00000483275 SPAG11AQ6PDA7 123 aa7.83□□□□□ -1.16
VARS-226ENST00000483275 FP248Q71RG6 208 aaPredicted RBP7.83□□□□□ -1.16
VARS-226ENST00000483275 ZNF815PA8K554 130 aa7.82□□□□□ -1.16
VARS-226ENST00000483275 ASB16-AS1Q495Z4 193 aa7.82□□□□□ -1.16
VARS-226ENST00000483275 ZNF706Q9Y5V0 76 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms