RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 HIVEP2P31629 2446 aa12.33□□□□□ -0.44
SSR4-209ENST00000482902 BCE1O60756 84 aa12.32□□□□□ -0.44
SSR4-209ENST00000482902 DEFB135Q30KP9 77 aa12.32□□□□□ -0.44
SSR4-209ENST00000482902 Q6ZQT0 140 aa12.32□□□□□ -0.44
SSR4-209ENST00000482902 GCN1Q92616 2671 aaKnown RBP12.31□□□□□ -0.44
SSR4-209ENST00000482902 CD164L2Q6UWJ8 174 aa12.31□□□□□ -0.44
SSR4-209ENST00000482902 MRAPQ8TCY5 172 aa12.31□□□□□ -0.44
SSR4-209ENST00000482902 J3QKU1 62 aa12.31□□□□□ -0.44
SSR4-209ENST00000482902 Q8N3U1 123 aa12.31□□□□□ -0.44
SSR4-209ENST00000482902 NBEAL2Q6ZNJ1 2754 aa12.3□□□□□ -0.44
SSR4-209ENST00000482902 IGLV10-54A0A075B6I4 117 aa12.3□□□□□ -0.44
SSR4-209ENST00000482902 KIAA0087Q14695 138 aa12.3□□□□□ -0.44
SSR4-209ENST00000482902 CHCHD10Q8WYQ3 142 aaPredicted RBP12.3□□□□□ -0.44
SSR4-209ENST00000482902 ANGP03950 147 aaKnown RBP12.3□□□□□ -0.44
SSR4-209ENST00000482902 C9orf66Q5T8R8 295 aa12.3□□□□□ -0.44
SSR4-209ENST00000482902 KLKP1Q107X0 134 aa12.29□□□□□ -0.44
SSR4-209ENST00000482902 M0R2N4 97 aa12.28□□□□□ -0.44
SSR4-209ENST00000482902 LINC01547P58512 204 aaPredicted RBP12.28□□□□□ -0.44
SSR4-209ENST00000482902 REG3AQ06141 175 aa12.28□□□□□ -0.44
SSR4-209ENST00000482902 C6orf99Q4VX62 202 aa12.28□□□□□ -0.44
SSR4-209ENST00000482902 LOC110117498A0A087WWA1 95 aa12.28□□□□□ -0.44
SSR4-209ENST00000482902 IGHV4-28A0A0C4DH34 117 aa12.28□□□□□ -0.44
SSR4-209ENST00000482902 DAD1P61803 113 aa12.28□□□□□ -0.44
SSR4-209ENST00000482902 UNC79Q9P2D8 2635 aa12.27□□□□□ -0.44
SSR4-209ENST00000482902 TRAV10A0A0B4J240 114 aa12.27□□□□□ -0.45
SSR4-209ENST00000482902 RBM3P98179 157 aaKnown RBP12.27□□□□□ -0.45
SSR4-209ENST00000482902 LINC00575Q6W349 94 aa12.27□□□□□ -0.45
SSR4-209ENST00000482902 Q8NDZ9 215 aa12.26□□□□□ -0.45
SSR4-209ENST00000482902 COX17Q14061 63 aa12.26□□□□□ -0.45
SSR4-209ENST00000482902 ZNF561-AS1K7EIQ3 104 aa12.25□□□□□ -0.45
SSR4-209ENST00000482902 APOC4P55056 127 aa12.25□□□□□ -0.45
SSR4-209ENST00000482902 C9orf116Q5BN46 136 aaPredicted RBP12.25□□□□□ -0.45
SSR4-209ENST00000482902 LINC00336Q6ZUF6 198 aa12.25□□□□□ -0.45
SSR4-209ENST00000482902 Q6ZVQ6 151 aa12.25□□□□□ -0.45
SSR4-209ENST00000482902 C6orf223Q8N319 242 aa12.25□□□□□ -0.45
SSR4-209ENST00000482902 CELA1Q9UNI1 258 aa12.24□□□□□ -0.45
SSR4-209ENST00000482902 SNURFQ9Y675 71 aa12.24□□□□□ -0.45
SSR4-209ENST00000482902 FASNP49327 2511 aaKnown RBP12.23□□□□□ -0.45
SSR4-209ENST00000482902 RMI2Q96E14 147 aa12.23□□□□□ -0.45
SSR4-209ENST00000482902 HAMPP81172 84 aa12.22□□□□□ -0.45
SSR4-209ENST00000482902 PRO0628Q9UI54 55 aa12.22□□□□□ -0.45
SSR4-209ENST00000482902 VWFP04275 2813 aa12.22□□□□□ -0.45
SSR4-209ENST00000482902 FP248Q71RG6 208 aaPredicted RBP12.21□□□□□ -0.46
SSR4-209ENST00000482902 Q8NAQ8 132 aa12.21□□□□□ -0.46
SSR4-209ENST00000482902 HELZ2Q9BYK8 2649 aaKnown RBP12.21□□□□□ -0.46
SSR4-209ENST00000482902 HTN3P15516 51 aa12.2□□□□□ -0.46
SSR4-209ENST00000482902 LAMTOR3Q9UHA4 124 aa12.2□□□□□ -0.46
SSR4-209ENST00000482902 F8WEM9 126 aa12.2□□□□□ -0.46
SSR4-209ENST00000482902 CXCL6P80162 114 aa12.19□□□□□ -0.46
SSR4-209ENST00000482902 SMIM26A0A096LP01 95 aa12.18□□□□□ -0.46
SSR4-209ENST00000482902 INAFM1C9JVW0 142 aa12.18□□□□□ -0.46
SSR4-209ENST00000482902 MIFP14174 115 aa12.18□□□□□ -0.46
SSR4-209ENST00000482902 SPAG11BQ08648 103 aa12.17□□□□□ -0.46
SSR4-209ENST00000482902 C10orf25Q5T742 122 aa12.17□□□□□ -0.46
SSR4-209ENST00000482902 SPART-AS1P0CW21 52 aa12.17□□□□□ -0.46
SSR4-209ENST00000482902 LELP1Q5T871 98 aa12.17□□□□□ -0.46
SSR4-209ENST00000482902 UNQ6190/PRO20217Q6UXQ8 127 aa12.17□□□□□ -0.46
SSR4-209ENST00000482902 TM2D3Q9BRN9 247 aa12.14□□□□□ -0.47
SSR4-209ENST00000482902 KLK12Q9UKR0 248 aa12.14□□□□□ -0.47
SSR4-209ENST00000482902 TRBV7-4A0A0J9YYF1 115 aa12.13□□□□□ -0.47
SSR4-209ENST00000482902 Q6ZQY7 126 aa12.13□□□□□ -0.47
SSR4-209ENST00000482902 CYSRT1A8MQ03 144 aa12.13□□□□□ -0.47
SSR4-209ENST00000482902 PDE6GP18545 87 aa12.13□□□□□ -0.47
SSR4-209ENST00000482902 MUC7Q8TAX7 377 aa12.12□□□□□ -0.47
SSR4-209ENST00000482902 PRR34Q9NV39 138 aa12.11□□□□□ -0.47
SSR4-209ENST00000482902 TRBV7-6A0A0J9YX20 115 aa12.11□□□□□ -0.47
SSR4-209ENST00000482902 NDUFC1O43677 76 aa12.11□□□□□ -0.47
SSR4-209ENST00000482902 IGLV6-57P01721 117 aa12.11□□□□□ -0.47
SSR4-209ENST00000482902 LINC00474Q9P2X8 69 aa12.11□□□□□ -0.47
SSR4-209ENST00000482902 A0A0J9YWU9 116 aa12.1□□□□□ -0.47
SSR4-209ENST00000482902 IGHV4-30-4P0DP06 118 aa12.1□□□□□ -0.47
SSR4-209ENST00000482902 SCXQ7RTU7 201 aa12.1□□□□□ -0.47
SSR4-209ENST00000482902 NOTCH2Q04721 2471 aa12.08□□□□□ -0.48
SSR4-209ENST00000482902 TENM1Q9UKZ4 2725 aa12.07□□□□□ -0.48
SSR4-209ENST00000482902 ATP5EP56381 51 aaPredicted RBP12.07□□□□□ -0.48
SSR4-209ENST00000482902 C1orf43Q9BWL3 253 aa12.07□□□□□ -0.48
SSR4-209ENST00000482902 H3BQ85 93 aa12.06□□□□□ -0.48
SSR4-209ENST00000482902 NREPQ16612 68 aa12.06□□□□□ -0.48
SSR4-209ENST00000482902 HECTD1Q9ULT8 2610 aa12.05□□□□□ -0.48
SSR4-209ENST00000482902 C6orf48Q9UBA6 75 aa12.04□□□□□ -0.48
SSR4-209ENST00000482902 GVQW2A0A096LPI5 108 aaPredicted RBP12.03□□□□□ -0.48
SSR4-209ENST00000482902 TMEM254Q8TBM7 123 aa12.03□□□□□ -0.48
SSR4-209ENST00000482902 KMT2BQ9UMN6 2715 aaPredicted RBP12.03□□□□□ -0.48
SSR4-209ENST00000482902 OTOGQ6ZRI0 2925 aa12.03□□□□□ -0.48
SSR4-209ENST00000482902 XAGE1AQ9HD64 81 aa12.02□□□□□ -0.49
SSR4-209ENST00000482902 NSD1Q96L73 2696 aaPredicted RBP12.02□□□□□ -0.49
SSR4-209ENST00000482902 BPY2O14599 106 aa12.01□□□□□ -0.49
SSR4-209ENST00000482902 TRRAPQ9Y4A5 3859 aa12.01□□□□□ -0.49
SSR4-209ENST00000482902 ERC2-IT1O76042 136 aa12□□□□□ -0.49
SSR4-209ENST00000482902 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12□□□□□ -0.49
SSR4-209ENST00000482902 DIRC1Q969H9 104 aa12□□□□□ -0.49
SSR4-209ENST00000482902 PKIGQ9Y2B9 76 aa12□□□□□ -0.49
SSR4-209ENST00000482902 FAM229BQ4G0N7 80 aa11.99□□□□□ -0.49
SSR4-209ENST00000482902 ATRQ13535 2644 aa11.99□□□□□ -0.49
SSR4-209ENST00000482902 WFDC10BQ8IUB3 73 aa11.99□□□□□ -0.49
SSR4-209ENST00000482902 HIGD2BQ4VC39 106 aa11.98□□□□□ -0.49
SSR4-209ENST00000482902 RETNQ9HD89 108 aa11.97□□□□□ -0.49
SSR4-209ENST00000482902 KPRPQ5T749 579 aaPredicted RBP11.97□□□□□ -0.49
SSR4-209ENST00000482902 Q8N9L7 120 aa11.96□□□□□ -0.49
SSR4-209ENST00000482902 CAMK2N2Q96S95 79 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms