RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SCGB1D4Q6XE38 83 aa8.37□□□□□ -1.07
HDAC1-208ENST00000482310 MIR7-3HGQ8N6C7 128 aa8.37□□□□□ -1.07
HDAC1-208ENST00000482310 SND1-IT1Q9HBX3 110 aa8.37□□□□□ -1.07
HDAC1-208ENST00000482310 CDK2AP2O75956 126 aa8.36□□□□□ -1.07
HDAC1-208ENST00000482310 SERTAD4-AS1Q5TG53 156 aa8.35□□□□□ -1.07
HDAC1-208ENST00000482310 LINC00587B1AMM8 73 aa8.34□□□□□ -1.07
HDAC1-208ENST00000482310 ADAMTSL4-AS1Q5T5F5 129 aa8.34□□□□□ -1.07
HDAC1-208ENST00000482310 PHF5AQ7RTV0 110 aaKnown RBP8.34□□□□□ -1.07
HDAC1-208ENST00000482310 C14orf144Q96I85 54 aa8.34□□□□□ -1.07
HDAC1-208ENST00000482310 PLAC8Q9NZF1 115 aa8.34□□□□□ -1.07
HDAC1-208ENST00000482310 LOC105371267A0A1B0GV96 52 aa8.33□□□□□ -1.08
HDAC1-208ENST00000482310 M0QXV9 152 aa8.33□□□□□ -1.08
HDAC1-208ENST00000482310 KRTAP7-1Q8IUC3 87 aa8.32□□□□□ -1.08
HDAC1-208ENST00000482310 BOD1L2Q8IYS8 172 aa8.31□□□□□ -1.08
HDAC1-208ENST00000482310 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
HDAC1-208ENST00000482310 NKAPP1Q8N9T2 125 aa8.31□□□□□ -1.08
HDAC1-208ENST00000482310 Q8NDZ9 215 aa8.31□□□□□ -1.08
HDAC1-208ENST00000482310 LITAFQ99732 161 aa8.31□□□□□ -1.08
HDAC1-208ENST00000482310 MIEN1Q9BRT3 115 aa8.31□□□□□ -1.08
HDAC1-208ENST00000482310 GAGE10A6NGK3 116 aa8.3□□□□□ -1.08
HDAC1-208ENST00000482310 TMEM238C9JI98 176 aa8.3□□□□□ -1.08
HDAC1-208ENST00000482310 NCR3O14931 201 aa8.3□□□□□ -1.08
HDAC1-208ENST00000482310 COX8AP10176 69 aa8.3□□□□□ -1.08
HDAC1-208ENST00000482310 HERC1Q15751 4861 aa8.29□□□□□ -1.08
HDAC1-208ENST00000482310 EIF4EBP3O60516 100 aaPredicted RBP8.29□□□□□ -1.08
HDAC1-208ENST00000482310 TIMM17BO60830 172 aa8.29□□□□□ -1.08
HDAC1-208ENST00000482310 S100A12P80511 92 aa8.29□□□□□ -1.08
HDAC1-208ENST00000482310 SOSTDC1Q6X4U4 206 aa8.29□□□□□ -1.08
HDAC1-208ENST00000482310 C22orf24Q9Y442 160 aa8.29□□□□□ -1.08
HDAC1-208ENST00000482310 VPREB1P12018 145 aa8.28□□□□□ -1.08
HDAC1-208ENST00000482310 UBE2BP63146 152 aa8.28□□□□□ -1.08
HDAC1-208ENST00000482310 PRR3P79522 188 aaKnown RBP8.28□□□□□ -1.08
HDAC1-208ENST00000482310 C7orf33Q8WU49 177 aa8.28□□□□□ -1.08
HDAC1-208ENST00000482310 RPL37AP8A6NKH3 93 aa8.27□□□□□ -1.09
HDAC1-208ENST00000482310 RPL24P83731 157 aaKnown RBP8.27□□□□□ -1.09
HDAC1-208ENST00000482310 Q5VSD8 79 aa8.27□□□□□ -1.09
HDAC1-208ENST00000482310 SLC25A34Q6PIV7 304 aa8.27□□□□□ -1.09
HDAC1-208ENST00000482310 SRSF9Q13242 221 aaKnown RBP eCLIP8.26□□□□□ -1.09
HDAC1-208ENST00000482310 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
HDAC1-208ENST00000482310 LINC00308Q8TCZ7 52 aa8.26□□□□□ -1.09
HDAC1-208ENST00000482310 SPANXDQ9BXN6 97 aa8.26□□□□□ -1.09
HDAC1-208ENST00000482310 SPANXCQ9NY87 97 aa8.26□□□□□ -1.09
HDAC1-208ENST00000482310 PLA2G2DQ9UNK4 145 aa8.26□□□□□ -1.09
HDAC1-208ENST00000482310 SMIM6P0DI80 62 aa8.25□□□□□ -1.09
HDAC1-208ENST00000482310 RPL37AP61513 92 aaKnown RBP8.25□□□□□ -1.09
HDAC1-208ENST00000482310 KRTAP11-1Q8IUC1 163 aa8.25□□□□□ -1.09
HDAC1-208ENST00000482310 IGKV2-28A0A075B6P5 120 aa8.24□□□□□ -1.09
HDAC1-208ENST00000482310 EPM2AB3EWF7 344 aa8.24□□□□□ -1.09
HDAC1-208ENST00000482310 FAM229AH3BQW9 127 aa8.24□□□□□ -1.09
HDAC1-208ENST00000482310 IGKV2D-28P01615 120 aa8.24□□□□□ -1.09
HDAC1-208ENST00000482310 LINC00167Q96N53 147 aa8.24□□□□□ -1.09
HDAC1-208ENST00000482310 PRO1933Q9H354 126 aa8.24□□□□□ -1.09
HDAC1-208ENST00000482310 FAT1Q14517 4588 aa8.24□□□□□ -1.09
HDAC1-208ENST00000482310 VPS13BQ7Z7G8 4022 aa8.23□□□□□ -1.09
HDAC1-208ENST00000482310 IGLV5-37A0A075B6J1 123 aa8.23□□□□□ -1.09
HDAC1-208ENST00000482310 LBHQ53QV2 105 aaPredicted RBP8.23□□□□□ -1.09
HDAC1-208ENST00000482310 MUSTN1Q8IVN3 82 aa8.23□□□□□ -1.09
HDAC1-208ENST00000482310 Q8N1X5 172 aa8.23□□□□□ -1.09
HDAC1-208ENST00000482310 HIST1H4GQ99525 98 aa8.23□□□□□ -1.09
HDAC1-208ENST00000482310 DLEU1O43261 78 aa8.22□□□□□ -1.09
HDAC1-208ENST00000482310 C2orf91Q6ZV80 131 aa8.22□□□□□ -1.09
HDAC1-208ENST00000482310 PSORS1C2Q9UIG4 136 aa8.22□□□□□ -1.09
HDAC1-208ENST00000482310 M0R378 163 aa8.21□□□□□ -1.1
HDAC1-208ENST00000482310 C1orf137Q5JT78 98 aa8.21□□□□□ -1.1
HDAC1-208ENST00000482310 SPANXB1Q9NS25 103 aaPredicted RBP8.21□□□□□ -1.1
HDAC1-208ENST00000482310 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
HDAC1-208ENST00000482310 PLA2G1BP04054 148 aaKnown RBP8.2□□□□□ -1.1
HDAC1-208ENST00000482310 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
HDAC1-208ENST00000482310 C12orf57Q99622 126 aa8.2□□□□□ -1.1
HDAC1-208ENST00000482310 IFITM1P13164 125 aa8.19□□□□□ -1.1
HDAC1-208ENST00000482310 S100A7L2Q5SY68 101 aa8.19□□□□□ -1.1
HDAC1-208ENST00000482310 Q6ZVH6 145 aa8.19□□□□□ -1.1
HDAC1-208ENST00000482310 OR13C6PQ8NH95 151 aa8.19□□□□□ -1.1
HDAC1-208ENST00000482310 COPS9Q8WXC6 57 aa8.19□□□□□ -1.1
HDAC1-208ENST00000482310 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
HDAC1-208ENST00000482310 TRBV10-3A0A0K0K1G6 114 aa8.18□□□□□ -1.1
HDAC1-208ENST00000482310 NDUFC2O95298 119 aa8.18□□□□□ -1.1
HDAC1-208ENST00000482310 UQCR10Q9UDW1 63 aa8.18□□□□□ -1.1
HDAC1-208ENST00000482310 DDTP30046 118 aa8.17□□□□□ -1.1
HDAC1-208ENST00000482310 HIGD1BQ9P298 99 aa8.17□□□□□ -1.1
HDAC1-208ENST00000482310 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
HDAC1-208ENST00000482310 IGLV1-50A0A075B6I6 118 aa8.16□□□□□ -1.1
HDAC1-208ENST00000482310 A4D1N5 150 aa8.16□□□□□ -1.1
HDAC1-208ENST00000482310 HNRNPA3P51991 378 aaKnown RBP8.16□□□□□ -1.1
HDAC1-208ENST00000482310 TRBV10-2A0A0K0K1G8 114 aa8.15□□□□□ -1.1
HDAC1-208ENST00000482310 KRTAP10-4P60372 401 aaPredicted RBP8.15□□□□□ -1.1
HDAC1-208ENST00000482310 LINC00337Q8N6G1 96 aa8.15□□□□□ -1.1
HDAC1-208ENST00000482310 A6NDN8 102 aa8.14□□□□□ -1.11
HDAC1-208ENST00000482310 REG3GQ6UW15 175 aa8.14□□□□□ -1.11
HDAC1-208ENST00000482310 TMEM126AQ9H061 195 aa8.14□□□□□ -1.11
HDAC1-208ENST00000482310 FAM19A1Q7Z5A9 133 aa8.13□□□□□ -1.11
HDAC1-208ENST00000482310 CEND1Q8N111 149 aa8.13□□□□□ -1.11
HDAC1-208ENST00000482310 PRYO14603 147 aa8.12□□□□□ -1.11
HDAC1-208ENST00000482310 UBE2AP49459 152 aa8.12□□□□□ -1.11
HDAC1-208ENST00000482310 LINC00518Q8N0U6 118 aa8.12□□□□□ -1.11
HDAC1-208ENST00000482310 TRAV23DV6A0A075B6W5 121 aa8.11□□□□□ -1.11
HDAC1-208ENST00000482310 TSTD3H0UI37 97 aa8.11□□□□□ -1.11
HDAC1-208ENST00000482310 BCE1O60756 84 aa8.11□□□□□ -1.11
HDAC1-208ENST00000482310 IGLV6-57P01721 117 aa8.11□□□□□ -1.11
HDAC1-208ENST00000482310 IGLV7-43P04211 117 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms