RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 TMEM126AQ9H061 195 aa10.52□□□□□ -0.73
RXRA-202ENST00000481739 LINC00588Q9Y4M8 146 aa10.52□□□□□ -0.73
RXRA-202ENST00000481739 C10orf25Q5T742 122 aa10.51□□□□□ -0.73
RXRA-202ENST00000481739 UPK3BQ9BT76 320 aa10.51□□□□□ -0.73
RXRA-202ENST00000481739 C9orf116Q5BN46 136 aaPredicted RBP10.51□□□□□ -0.73
RXRA-202ENST00000481739 CAMK2N2Q96S95 79 aa10.5□□□□□ -0.73
RXRA-202ENST00000481739 APLNQ9ULZ1 77 aa10.5□□□□□ -0.73
RXRA-202ENST00000481739 TGP01266 2768 aa10.5□□□□□ -0.73
RXRA-202ENST00000481739 IGKV2D-24A0A075B6R9 120 aa10.49□□□□□ -0.73
RXRA-202ENST00000481739 RMI2Q96E14 147 aa10.49□□□□□ -0.73
RXRA-202ENST00000481739 C6orf48Q9UBA6 75 aa10.49□□□□□ -0.73
RXRA-202ENST00000481739 CSMD3Q7Z407 3707 aa10.49□□□□□ -0.73
RXRA-202ENST00000481739 C15orf56Q8N910 161 aa10.48□□□□□ -0.73
RXRA-202ENST00000481739 UBE2DNLQ8IWF7 75 aa10.47□□□□□ -0.73
RXRA-202ENST00000481739 A0A1B0GX51 115 aa10.47□□□□□ -0.73
RXRA-202ENST00000481739 LINC00526Q96FQ7 95 aa10.47□□□□□ -0.73
RXRA-202ENST00000481739 DNAL4O96015 105 aa10.46□□□□□ -0.74
RXRA-202ENST00000481739 PLECQ15149 4684 aaKnown RBP10.46□□□□□ -0.74
RXRA-202ENST00000481739 HIGD2BQ4VC39 106 aa10.45□□□□□ -0.74
RXRA-202ENST00000481739 FAM218AQ96MZ4 157 aa10.45□□□□□ -0.74
RXRA-202ENST00000481739 TENM2Q9NT68 2774 aa10.45□□□□□ -0.74
RXRA-202ENST00000481739 S100A7L2Q5SY68 101 aa10.44□□□□□ -0.74
RXRA-202ENST00000481739 NDUFC2-KCTD14E9PQ53 114 aa10.43□□□□□ -0.74
RXRA-202ENST00000481739 TEX49A0A1B0GTD5 131 aa10.42□□□□□ -0.74
RXRA-202ENST00000481739 SNCGO76070 127 aa10.42□□□□□ -0.74
RXRA-202ENST00000481739 Q6ZRU5 148 aa10.42□□□□□ -0.74
RXRA-202ENST00000481739 Q9HAA7 133 aa10.42□□□□□ -0.74
RXRA-202ENST00000481739 STARD9Q9P2P6 4700 aa10.42□□□□□ -0.74
RXRA-202ENST00000481739 BAALC-AS2P0C853 105 aa10.42□□□□□ -0.74
RXRA-202ENST00000481739 SYCNQ0VAF6 134 aa10.41□□□□□ -0.74
RXRA-202ENST00000481739 LYSTQ99698 3801 aa10.41□□□□□ -0.74
RXRA-202ENST00000481739 NCR3O14931 201 aa10.4□□□□□ -0.74
RXRA-202ENST00000481739 IGLV6-57P01721 117 aa10.4□□□□□ -0.74
RXRA-202ENST00000481739 PRR3P79522 188 aaKnown RBP10.4□□□□□ -0.74
RXRA-202ENST00000481739 A0A087WYN8 130 aa10.4□□□□□ -0.75
RXRA-202ENST00000481739 WWC2-AS2Q96NR7 200 aa10.4□□□□□ -0.75
RXRA-202ENST00000481739 SIGMAR1Q99720 223 aa10.4□□□□□ -0.75
RXRA-202ENST00000481739 Q8NDZ9 215 aa10.39□□□□□ -0.75
RXRA-202ENST00000481739 FAM240AA0A1B0GVK7 77 aa10.38□□□□□ -0.75
RXRA-202ENST00000481739 LECT2O14960 151 aa10.37□□□□□ -0.75
RXRA-202ENST00000481739 INAFM2P0DMQ5 153 aa10.37□□□□□ -0.75
RXRA-202ENST00000481739 RPL18AQ02543 176 aaKnown RBP10.37□□□□□ -0.75
RXRA-202ENST00000481739 LINC00167Q96N53 147 aa10.37□□□□□ -0.75
RXRA-202ENST00000481739 CDIP1Q9H305 208 aa10.37□□□□□ -0.75
RXRA-202ENST00000481739 XAGE1AQ9HD64 81 aa10.37□□□□□ -0.75
RXRA-202ENST00000481739 TLX1NBP0CAT3 122 aa10.36□□□□□ -0.75
RXRA-202ENST00000481739 C6orf99Q4VX62 202 aa10.35□□□□□ -0.75
RXRA-202ENST00000481739 ORMDL1Q9P0S3 153 aa10.35□□□□□ -0.75
RXRA-202ENST00000481739 USP17L23D6RBM5 183 aa10.35□□□□□ -0.75
RXRA-202ENST00000481739 VPREB1P12018 145 aa10.35□□□□□ -0.75
RXRA-202ENST00000481739 DNAH1Q9P2D7 4330 aa10.34□□□□□ -0.75
RXRA-202ENST00000481739 M0R378 163 aa10.34□□□□□ -0.75
RXRA-202ENST00000481739 ACYP1P07311 99 aa10.34□□□□□ -0.75
RXRA-202ENST00000481739 Q8N814 137 aa10.33□□□□□ -0.76
RXRA-202ENST00000481739 VPS13DQ5THJ4 4388 aa10.33□□□□□ -0.76
RXRA-202ENST00000481739 TRAV23DV6A0A075B6W5 121 aa10.33□□□□□ -0.76
RXRA-202ENST00000481739 TRBV7-6A0A0J9YX20 115 aa10.33□□□□□ -0.76
RXRA-202ENST00000481739 SCGB1A1P11684 91 aa10.33□□□□□ -0.76
RXRA-202ENST00000481739 TRBV10-3A0A0K0K1G6 114 aa10.32□□□□□ -0.76
RXRA-202ENST00000481739 Q6ZRP5 223 aa10.32□□□□□ -0.76
RXRA-202ENST00000481739 H3BQ85 93 aa10.31□□□□□ -0.76
RXRA-202ENST00000481739 PCP4P48539 62 aa10.31□□□□□ -0.76
RXRA-202ENST00000481739 LINC00575Q6W349 94 aa10.31□□□□□ -0.76
RXRA-202ENST00000481739 DIRC1Q969H9 104 aa10.31□□□□□ -0.76
RXRA-202ENST00000481739 C22orf24Q9Y442 160 aa10.31□□□□□ -0.76
RXRA-202ENST00000481739 GAGE2EQ4V326 116 aa10.3□□□□□ -0.76
RXRA-202ENST00000481739 GAGE2DQ9UEU5 116 aa10.3□□□□□ -0.76
RXRA-202ENST00000481739 PLA2G2DQ9UNK4 145 aa10.3□□□□□ -0.76
RXRA-202ENST00000481739 TMEM256-PLSCR3K7ERE1 68 aa10.3□□□□□ -0.76
RXRA-202ENST00000481739 CASC10Q5T4H9 136 aa10.29□□□□□ -0.76
RXRA-202ENST00000481739 OBSCN-AS1Q96MR7 158 aa10.29□□□□□ -0.76
RXRA-202ENST00000481739 KRTAP1-5Q9BYS1 174 aa10.29□□□□□ -0.76
RXRA-202ENST00000481739 ZNF73O43830 326 aaPredicted RBP10.28□□□□□ -0.76
RXRA-202ENST00000481739 GHRHP01286 108 aa10.28□□□□□ -0.76
RXRA-202ENST00000481739 NBDYA0A0U1RRE5 68 aa10.27□□□□□ -0.77
RXRA-202ENST00000481739 hADV29S1A0JD25 119 aa10.27□□□□□ -0.77
RXRA-202ENST00000481739 C3orf84H3BNL1 204 aa10.27□□□□□ -0.77
RXRA-202ENST00000481739 TTC32Q5I0X7 151 aa10.27□□□□□ -0.77
RXRA-202ENST00000481739 JMJD7-PLA2G4BH0Y9G9 81 aa10.26□□□□□ -0.77
RXRA-202ENST00000481739 C9orf129Q5T035 196 aaKnown RBP10.26□□□□□ -0.77
RXRA-202ENST00000481739 XGP55808 180 aa10.26□□□□□ -0.77
RXRA-202ENST00000481739 NKAPP1Q8N9T2 125 aa10.26□□□□□ -0.77
RXRA-202ENST00000481739 SLPIP03973 132 aa10.25□□□□□ -0.77
RXRA-202ENST00000481739 ELOF1P60002 83 aaKnown RBP10.25□□□□□ -0.77
RXRA-202ENST00000481739 C14orf177Q52M58 125 aa10.25□□□□□ -0.77
RXRA-202ENST00000481739 IGLV5-37A0A075B6J1 123 aa10.24□□□□□ -0.77
RXRA-202ENST00000481739 M0R2N4 97 aa10.24□□□□□ -0.77
RXRA-202ENST00000481739 LY6G6CO95867 125 aa10.24□□□□□ -0.77
RXRA-202ENST00000481739 COX7BP24311 80 aa10.24□□□□□ -0.77
RXRA-202ENST00000481739 LOC107984640A0A0U1RRK4 108 aa10.23□□□□□ -0.77
RXRA-202ENST00000481739 PSCAO43653 123 aa10.23□□□□□ -0.77
RXRA-202ENST00000481739 MT-ATP8P03928 68 aa10.21□□□□□ -0.77
RXRA-202ENST00000481739 CNBPP62633 177 aaKnown RBP10.21□□□□□ -0.77
RXRA-202ENST00000481739 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.21□□□□□ -0.77
RXRA-202ENST00000481739 KCNQ1DNQ9H478 68 aa10.21□□□□□ -0.78
RXRA-202ENST00000481739 DNAH10Q8IVF4 4471 aa10.21□□□□□ -0.78
RXRA-202ENST00000481739 ALMS1Q8TCU4 4167 aa10.2□□□□□ -0.78
RXRA-202ENST00000481739 PKIGQ9Y2B9 76 aa10.19□□□□□ -0.78
RXRA-202ENST00000481739 LINC00476Q8WZB0 136 aa10.19□□□□□ -0.78
RXRA-202ENST00000481739 SERTAD4-AS1Q5TG53 156 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms