RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 E9PLD3 99 aa12.41□□□□□ -0.42
VPS36-204ENST00000480923 UBE2BP63146 152 aa12.41□□□□□ -0.42
VPS36-204ENST00000480923 SRSF9Q13242 221 aaKnown RBP eCLIP12.41□□□□□ -0.42
VPS36-204ENST00000480923 LEPROTO15243 131 aa12.4□□□□□ -0.42
VPS36-204ENST00000480923 PLEKHB2Q96CS7 222 aa12.4□□□□□ -0.42
VPS36-204ENST00000480923 MT1HL1P0DM35 61 aa12.39□□□□□ -0.43
VPS36-204ENST00000480923 REG3GQ6UW15 175 aa12.38□□□□□ -0.43
VPS36-204ENST00000480923 KRTAP11-1Q8IUC1 163 aa12.38□□□□□ -0.43
VPS36-204ENST00000480923 ANKRD39Q53RE8 183 aa12.37□□□□□ -0.43
VPS36-204ENST00000480923 SERTAD4-AS1Q5TG53 156 aa12.37□□□□□ -0.43
VPS36-204ENST00000480923 VAMP8Q9BV40 100 aa12.37□□□□□ -0.43
VPS36-204ENST00000480923 J3QQQ9 107 aa12.36□□□□□ -0.43
VPS36-204ENST00000480923 SMIM6P0DI80 62 aa12.36□□□□□ -0.43
VPS36-204ENST00000480923 LINC01600Q96MT4 127 aa12.36□□□□□ -0.43
VPS36-204ENST00000480923 LGALS3P17931 250 aaKnown RBP12.35□□□□□ -0.43
VPS36-204ENST00000480923 SFTA2Q6UW10 78 aa12.35□□□□□ -0.43
VPS36-204ENST00000480923 IGLV7-43P04211 117 aa12.34□□□□□ -0.43
VPS36-204ENST00000480923 C22orf24Q9Y442 160 aa12.34□□□□□ -0.43
VPS36-204ENST00000480923 IGKV2D-26A0A0A0MRZ7 120 aa12.33□□□□□ -0.44
VPS36-204ENST00000480923 NMUP48645 174 aa12.33□□□□□ -0.44
VPS36-204ENST00000480923 S100A12P80511 92 aa12.33□□□□□ -0.44
VPS36-204ENST00000480923 PAM16Q9Y3D7 125 aa12.33□□□□□ -0.44
VPS36-204ENST00000480923 TSPEAR-AS2P59090 65 aa12.32□□□□□ -0.44
VPS36-204ENST00000480923 LBHQ53QV2 105 aaPredicted RBP12.32□□□□□ -0.44
VPS36-204ENST00000480923 NDUFA12Q9UI09 145 aa12.32□□□□□ -0.44
VPS36-204ENST00000480923 MYMXA0A1B0GTQ4 84 aa12.31□□□□□ -0.44
VPS36-204ENST00000480923 PFN2P35080 140 aa12.31□□□□□ -0.44
VPS36-204ENST00000480923 SPATA45Q537H7 98 aa12.31□□□□□ -0.44
VPS36-204ENST00000480923 DIRC1Q969H9 104 aa12.29□□□□□ -0.44
VPS36-204ENST00000480923 ZNF625Q96I27 306 aaPredicted RBP12.29□□□□□ -0.44
VPS36-204ENST00000480923 TP73-AS1Q9UF72 201 aa12.29□□□□□ -0.44
VPS36-204ENST00000480923 HERV-K104P63124 156 aa12.28□□□□□ -0.44
VPS36-204ENST00000480923 MRPL55Q7Z7F7 128 aaKnown RBP12.28□□□□□ -0.44
VPS36-204ENST00000480923 ZNF815PA8K554 130 aa12.27□□□□□ -0.45
VPS36-204ENST00000480923 ERG28Q9UKR5 140 aa12.27□□□□□ -0.45
VPS36-204ENST00000480923 PLA2G2DQ9UNK4 145 aa12.27□□□□□ -0.45
VPS36-204ENST00000480923 HMCN2Q8NDA2 5059 aa12.27□□□□□ -0.45
VPS36-204ENST00000480923 PCP2Q8IVA1 136 aa12.26□□□□□ -0.45
VPS36-204ENST00000480923 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
VPS36-204ENST00000480923 LINC00587B1AMM8 73 aa12.24□□□□□ -0.45
VPS36-204ENST00000480923 H0Y9J4 135 aa12.24□□□□□ -0.45
VPS36-204ENST00000480923 COX8AP10176 69 aa12.24□□□□□ -0.45
VPS36-204ENST00000480923 NKAPP1Q8N9T2 125 aa12.24□□□□□ -0.45
VPS36-204ENST00000480923 GAGE10A6NGK3 116 aa12.23□□□□□ -0.45
VPS36-204ENST00000480923 KRTAP10-8P60410 259 aa12.23□□□□□ -0.45
VPS36-204ENST00000480923 COX17Q14061 63 aa12.23□□□□□ -0.45
VPS36-204ENST00000480923 LINC00167Q96N53 147 aa12.23□□□□□ -0.45
VPS36-204ENST00000480923 C12orf57Q99622 126 aa12.23□□□□□ -0.45
VPS36-204ENST00000480923 IGLV5-37A0A075B6J1 123 aa12.22□□□□□ -0.45
VPS36-204ENST00000480923 RPL37AP8A6NKH3 93 aa12.22□□□□□ -0.45
VPS36-204ENST00000480923 MEIG1Q5JSS6 88 aa12.22□□□□□ -0.45
VPS36-204ENST00000480923 C14orf144Q96I85 54 aa12.22□□□□□ -0.45
VPS36-204ENST00000480923 SND1-IT1Q9HBX3 110 aa12.22□□□□□ -0.45
VPS36-204ENST00000480923 DLEU1O43261 78 aa12.21□□□□□ -0.45
VPS36-204ENST00000480923 BOD1L2Q8IYS8 172 aa12.21□□□□□ -0.45
VPS36-204ENST00000480923 TNXBP22105 4242 aa12.21□□□□□ -0.45
VPS36-204ENST00000480923 A0A0J9YXY3 114 aa12.2□□□□□ -0.46
VPS36-204ENST00000480923 LINC00158P58513 81 aa12.2□□□□□ -0.46
VPS36-204ENST00000480923 SLC25A34Q6PIV7 304 aa12.2□□□□□ -0.46
VPS36-204ENST00000480923 SCGB1D4Q6XE38 83 aa12.2□□□□□ -0.46
VPS36-204ENST00000480923 LINC00518Q8N0U6 118 aa12.2□□□□□ -0.46
VPS36-204ENST00000480923 ZNF861PO60384 105 aa12.19□□□□□ -0.46
VPS36-204ENST00000480923 A0A0U1RRA0 63 aa12.17□□□□□ -0.46
VPS36-204ENST00000480923 BCE1O60756 84 aa12.17□□□□□ -0.46
VPS36-204ENST00000480923 TIMM17BO60830 172 aa12.16□□□□□ -0.46
VPS36-204ENST00000480923 SMIM13P0DJ93 91 aa12.16□□□□□ -0.46
VPS36-204ENST00000480923 VPREB1P12018 145 aa12.16□□□□□ -0.46
VPS36-204ENST00000480923 RPL24P83731 157 aaKnown RBP12.16□□□□□ -0.46
VPS36-204ENST00000480923 PRR26Q8N8Z3 221 aa12.15□□□□□ -0.46
VPS36-204ENST00000480923 UQCR10Q9UDW1 63 aa12.15□□□□□ -0.46
VPS36-204ENST00000480923 IGKV2-28A0A075B6P5 120 aa12.14□□□□□ -0.47
VPS36-204ENST00000480923 IGKV2D-28P01615 120 aa12.14□□□□□ -0.47
VPS36-204ENST00000480923 RPL28P46779 137 aaKnown RBP12.14□□□□□ -0.47
VPS36-204ENST00000480923 TMEM238C9JI98 176 aa12.13□□□□□ -0.47
VPS36-204ENST00000480923 PRO1933Q9H354 126 aa12.12□□□□□ -0.47
VPS36-204ENST00000480923 KRTAP1-4P0C5Y4 121 aa12.11□□□□□ -0.47
VPS36-204ENST00000480923 MIR7-3HGQ8N6C7 128 aa12.11□□□□□ -0.47
VPS36-204ENST00000480923 Q8NDZ9 215 aa12.11□□□□□ -0.47
VPS36-204ENST00000480923 LITAFQ99732 161 aa12.11□□□□□ -0.47
VPS36-204ENST00000480923 IGLV1-50A0A075B6I6 118 aa12.1□□□□□ -0.47
VPS36-204ENST00000480923 TSTD3H0UI37 97 aa12.1□□□□□ -0.47
VPS36-204ENST00000480923 UBE2AP49459 152 aa12.1□□□□□ -0.47
VPS36-204ENST00000480923 ADAMTSL4-AS1Q5T5F5 129 aa12.1□□□□□ -0.47
VPS36-204ENST00000480923 Q6ZVH6 145 aa12.09□□□□□ -0.47
VPS36-204ENST00000480923 MIEN1Q9BRT3 115 aa12.09□□□□□ -0.47
VPS36-204ENST00000480923 HIGD1BQ9P298 99 aa12.09□□□□□ -0.47
VPS36-204ENST00000480923 DAND5Q8N907 189 aa12.08□□□□□ -0.48
VPS36-204ENST00000480923 SPANXDQ9BXN6 97 aa12.08□□□□□ -0.48
VPS36-204ENST00000480923 SPANXCQ9NY87 97 aa12.08□□□□□ -0.48
VPS36-204ENST00000480923 COPS9Q8WXC6 57 aa12.07□□□□□ -0.48
VPS36-204ENST00000480923 SPANXB1Q9NS25 103 aaPredicted RBP12.07□□□□□ -0.48
VPS36-204ENST00000480923 C2orf91Q6ZV80 131 aa12.06□□□□□ -0.48
VPS36-204ENST00000480923 IFITM1P13164 125 aa12.05□□□□□ -0.48
VPS36-204ENST00000480923 TMEM126AQ9H061 195 aa12.05□□□□□ -0.48
VPS36-204ENST00000480923 M0R378 163 aa12.04□□□□□ -0.48
VPS36-204ENST00000480923 RPL13AP40429 203 aaKnown RBP12.04□□□□□ -0.48
VPS36-204ENST00000480923 FAM19A1Q7Z5A9 133 aa12.04□□□□□ -0.48
VPS36-204ENST00000480923 HIST1H4GQ99525 98 aa12.04□□□□□ -0.48
VPS36-204ENST00000480923 LOC107984156A0A0G2JMH3 177 aa12.03□□□□□ -0.48
VPS36-204ENST00000480923 KRTAP13-1Q8IUC0 172 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms