RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 CCDC179H3BU77 68 aa11.57□□□□□ -0.56
PKD1-213ENST00000480227 NOTCH1P46531 2555 aa11.57□□□□□ -0.56
PKD1-213ENST00000480227 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
PKD1-213ENST00000480227 B5MCH6 92 aa11.55□□□□□ -0.56
PKD1-213ENST00000480227 S100A7L2Q5SY68 101 aa11.55□□□□□ -0.56
PKD1-213ENST00000480227 Q8N814 137 aa11.55□□□□□ -0.56
PKD1-213ENST00000480227 OBSCN-AS1Q96MR7 158 aa11.55□□□□□ -0.56
PKD1-213ENST00000480227 C6orf99Q4VX62 202 aa11.54□□□□□ -0.56
PKD1-213ENST00000480227 WFDC10BQ8IUB3 73 aa11.54□□□□□ -0.56
PKD1-213ENST00000480227 FAM236AA0A1B0GUQ0 79 aa11.54□□□□□ -0.56
PKD1-213ENST00000480227 FAM236BA0A1B0GV22 79 aa11.54□□□□□ -0.56
PKD1-213ENST00000480227 Q6ZTC4 211 aa11.54□□□□□ -0.56
PKD1-213ENST00000480227 KPRPQ5T749 579 aaPredicted RBP11.53□□□□□ -0.56
PKD1-213ENST00000480227 IMUPQ9GZP8 106 aa11.53□□□□□ -0.56
PKD1-213ENST00000480227 KRTAP24-1Q3LI83 254 aa11.52□□□□□ -0.57
PKD1-213ENST00000480227 A0A0J9YWU9 116 aa11.51□□□□□ -0.57
PKD1-213ENST00000480227 DNAH3Q8TD57 4116 aa11.51□□□□□ -0.57
PKD1-213ENST00000480227 RPL18AQ02543 176 aaKnown RBP11.5□□□□□ -0.57
PKD1-213ENST00000480227 LINC00167Q96N53 147 aa11.5□□□□□ -0.57
PKD1-213ENST00000480227 LINC00846Q9NV44 126 aa11.5□□□□□ -0.57
PKD1-213ENST00000480227 XAGE1AQ9HD64 81 aa11.49□□□□□ -0.57
PKD1-213ENST00000480227 A0A1B0GX51 115 aa11.48□□□□□ -0.57
PKD1-213ENST00000480227 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
PKD1-213ENST00000480227 SS18L2Q9UHA2 77 aa11.48□□□□□ -0.57
PKD1-213ENST00000480227 HIGD2BQ4VC39 106 aa11.47□□□□□ -0.57
PKD1-213ENST00000480227 TMEM256-PLSCR3K7ERE1 68 aa11.47□□□□□ -0.57
PKD1-213ENST00000480227 EGFEM1PQ0D2K5 195 aa11.45□□□□□ -0.58
PKD1-213ENST00000480227 LINC00575Q6W349 94 aa11.45□□□□□ -0.58
PKD1-213ENST00000480227 C3orf56Q8N813 242 aa11.45□□□□□ -0.58
PKD1-213ENST00000480227 COL6A5A8TX70 2615 aa11.45□□□□□ -0.58
PKD1-213ENST00000480227 IGKV3D-7A0A0C4DH55 119 aa11.45□□□□□ -0.58
PKD1-213ENST00000480227 ESRGQ1W209 222 aa11.45□□□□□ -0.58
PKD1-213ENST00000480227 MUC7Q8TAX7 377 aa11.44□□□□□ -0.58
PKD1-213ENST00000480227 NBEAL1Q6ZS30 2694 aa11.44□□□□□ -0.58
PKD1-213ENST00000480227 GVQW2A0A096LPI5 108 aaPredicted RBP11.43□□□□□ -0.58
PKD1-213ENST00000480227 JMJD7-PLA2G4BH0Y9G9 81 aa11.43□□□□□ -0.58
PKD1-213ENST00000480227 H3BNG1 76 aa11.43□□□□□ -0.58
PKD1-213ENST00000480227 ZNF561-AS1K7EIQ3 104 aa11.43□□□□□ -0.58
PKD1-213ENST00000480227 IGLV6-57P01721 117 aa11.43□□□□□ -0.58
PKD1-213ENST00000480227 CCKP06307 115 aa11.43□□□□□ -0.58
PKD1-213ENST00000480227 TRBV10-3A0A0K0K1G6 114 aa11.42□□□□□ -0.58
PKD1-213ENST00000480227 hADV29S1A0JD25 119 aa11.42□□□□□ -0.58
PKD1-213ENST00000480227 KRTAP26-1Q6PEX3 210 aa11.42□□□□□ -0.58
PKD1-213ENST00000480227 CAMK2N2Q96S95 79 aa11.42□□□□□ -0.58
PKD1-213ENST00000480227 DEFB131BA0A096LNP1 70 aa11.39□□□□□ -0.59
PKD1-213ENST00000480227 Q6JHZ5 121 aa11.38□□□□□ -0.59
PKD1-213ENST00000480227 C11orf45Q8TAV5 145 aa11.38□□□□□ -0.59
PKD1-213ENST00000480227 TRAV23DV6A0A075B6W5 121 aa11.38□□□□□ -0.59
PKD1-213ENST00000480227 Q6ZRU5 148 aa11.38□□□□□ -0.59
PKD1-213ENST00000480227 C15orf56Q8N910 161 aa11.38□□□□□ -0.59
PKD1-213ENST00000480227 Q6ZQY7 126 aa11.36□□□□□ -0.59
PKD1-213ENST00000480227 LAMTOR3Q9UHA4 124 aa11.36□□□□□ -0.59
PKD1-213ENST00000480227 A0A087WVE0 104 aa11.36□□□□□ -0.59
PKD1-213ENST00000480227 PRB2P02812 416 aaPredicted RBP11.36□□□□□ -0.59
PKD1-213ENST00000480227 DIRC1Q969H9 104 aa11.35□□□□□ -0.59
PKD1-213ENST00000480227 C1orf43Q9BWL3 253 aa11.34□□□□□ -0.59
PKD1-213ENST00000480227 IGKV2D-24A0A075B6R9 120 aa11.34□□□□□ -0.59
PKD1-213ENST00000480227 ZNF73O43830 326 aaPredicted RBP11.34□□□□□ -0.59
PKD1-213ENST00000480227 RBM3P98179 157 aaKnown RBP11.34□□□□□ -0.59
PKD1-213ENST00000480227 HUWE1Q7Z6Z7 4374 aaKnown RBP11.33□□□□□ -0.6
PKD1-213ENST00000480227 VPREB1P12018 145 aa11.32□□□□□ -0.6
PKD1-213ENST00000480227 HIST1H4AP62805 103 aaKnown RBP11.32□□□□□ -0.6
PKD1-213ENST00000480227 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
PKD1-213ENST00000480227 NDUFC2-KCTD14E9PQ53 114 aa11.31□□□□□ -0.6
PKD1-213ENST00000480227 C3orf22Q8N5N4 141 aa11.31□□□□□ -0.6
PKD1-213ENST00000480227 COX7BP24311 80 aa11.3□□□□□ -0.6
PKD1-213ENST00000480227 C9orf153Q5TBE3 101 aa11.3□□□□□ -0.6
PKD1-213ENST00000480227 Q6ZQT0 140 aa11.3□□□□□ -0.6
PKD1-213ENST00000480227 M0R2N4 97 aa11.28□□□□□ -0.6
PKD1-213ENST00000480227 UQCRQO14949 82 aa11.28□□□□□ -0.6
PKD1-213ENST00000480227 Q6ZRP5 223 aa11.28□□□□□ -0.6
PKD1-213ENST00000480227 C2orf48Q96LS8 159 aa11.28□□□□□ -0.6
PKD1-213ENST00000480227 DNAH1Q9P2D7 4330 aa11.28□□□□□ -0.6
PKD1-213ENST00000480227 ATOX1O00244 68 aa11.28□□□□□ -0.6
PKD1-213ENST00000480227 M0R378 163 aa11.27□□□□□ -0.6
PKD1-213ENST00000480227 ELOF1P60002 83 aaKnown RBP11.27□□□□□ -0.61
PKD1-213ENST00000480227 UBL5Q9BZL1 73 aa11.27□□□□□ -0.61
PKD1-213ENST00000480227 LYSTQ99698 3801 aa11.27□□□□□ -0.61
PKD1-213ENST00000480227 MGAM2Q2M2H8 2515 aa11.27□□□□□ -0.61
PKD1-213ENST00000480227 DSCR8Q96T75 97 aa11.26□□□□□ -0.61
PKD1-213ENST00000480227 COX7CP15954 63 aa11.26□□□□□ -0.61
PKD1-213ENST00000480227 MRAPQ8TCY5 172 aa11.26□□□□□ -0.61
PKD1-213ENST00000480227 LOC110117498A0A087WWA1 95 aa11.25□□□□□ -0.61
PKD1-213ENST00000480227 SYCNQ0VAF6 134 aa11.25□□□□□ -0.61
PKD1-213ENST00000480227 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
PKD1-213ENST00000480227 FAM19A1Q7Z5A9 133 aa11.24□□□□□ -0.61
PKD1-213ENST00000480227 DNAH10OSP0CZ25 163 aa11.24□□□□□ -0.61
PKD1-213ENST00000480227 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.24□□□□□ -0.61
PKD1-213ENST00000480227 LINC00588Q9Y4M8 146 aa11.23□□□□□ -0.61
PKD1-213ENST00000480227 ATP5EP2Q5VTU8 51 aa11.22□□□□□ -0.61
PKD1-213ENST00000480227 CASC10Q5T4H9 136 aa11.21□□□□□ -0.62
PKD1-213ENST00000480227 TRAV10A0A0B4J240 114 aa11.2□□□□□ -0.62
PKD1-213ENST00000480227 TRBV7-6A0A0J9YX20 115 aa11.2□□□□□ -0.62
PKD1-213ENST00000480227 H3BQ85 93 aa11.19□□□□□ -0.62
PKD1-213ENST00000480227 LINC00528Q8N1L1 170 aa11.19□□□□□ -0.62
PKD1-213ENST00000480227 COL7A1Q02388 2944 aa11.19□□□□□ -0.62
PKD1-213ENST00000480227 K7EIL1 84 aa11.18□□□□□ -0.62
PKD1-213ENST00000480227 SERTAD4-AS1Q5TG53 156 aa11.18□□□□□ -0.62
PKD1-213ENST00000480227 STAB2Q8WWQ8 2551 aa11.18□□□□□ -0.62
PKD1-213ENST00000480227 DNAH10Q8IVF4 4471 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms