RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 ANAPC13Q9BS18 74 aa8.71□□□□□ -1.02
SEC13-216ENST00000479868 MGAM2Q2M2H8 2515 aa8.7□□□□□ -1.02
SEC13-216ENST00000479868 K7EIL1 84 aa8.7□□□□□ -1.02
SEC13-216ENST00000479868 NCR3O14931 201 aa8.7□□□□□ -1.02
SEC13-216ENST00000479868 MRAPQ8TCY5 172 aa8.7□□□□□ -1.02
SEC13-216ENST00000479868 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
SEC13-216ENST00000479868 HIGD2BQ4VC39 106 aa8.69□□□□□ -1.02
SEC13-216ENST00000479868 LECT2O14960 151 aa8.69□□□□□ -1.02
SEC13-216ENST00000479868 GVQW2A0A096LPI5 108 aaPredicted RBP8.68□□□□□ -1.02
SEC13-216ENST00000479868 DNAL4O96015 105 aa8.68□□□□□ -1.02
SEC13-216ENST00000479868 LINC01556Q5JQF7 62 aa8.68□□□□□ -1.02
SEC13-216ENST00000479868 TM2D3Q9BRN9 247 aa8.68□□□□□ -1.02
SEC13-216ENST00000479868 TMEM126AQ9H061 195 aa8.68□□□□□ -1.02
SEC13-216ENST00000479868 MUC7Q8TAX7 377 aa8.67□□□□□ -1.02
SEC13-216ENST00000479868 HUWE1Q7Z6Z7 4374 aaKnown RBP8.67□□□□□ -1.02
SEC13-216ENST00000479868 C15orf56Q8N910 161 aa8.66□□□□□ -1.02
SEC13-216ENST00000479868 TRAV10A0A0B4J240 114 aa8.65□□□□□ -1.02
SEC13-216ENST00000479868 SLPIP03973 132 aa8.65□□□□□ -1.02
SEC13-216ENST00000479868 CAMK2N2Q96S95 79 aa8.65□□□□□ -1.02
SEC13-216ENST00000479868 XAGE1AQ9HD64 81 aa8.65□□□□□ -1.02
SEC13-216ENST00000479868 IGKV2D-24A0A075B6R9 120 aa8.64□□□□□ -1.03
SEC13-216ENST00000479868 FAM240AA0A1B0GVK7 77 aa8.64□□□□□ -1.03
SEC13-216ENST00000479868 S100A7L2Q5SY68 101 aa8.64□□□□□ -1.03
SEC13-216ENST00000479868 C9orf129Q5T035 196 aaKnown RBP8.64□□□□□ -1.03
SEC13-216ENST00000479868 C15orf53Q8NAA6 179 aa8.64□□□□□ -1.03
SEC13-216ENST00000479868 DNAH10OSP0CZ25 163 aa8.63□□□□□ -1.03
SEC13-216ENST00000479868 RPL18AQ02543 176 aaKnown RBP8.63□□□□□ -1.03
SEC13-216ENST00000479868 C6orf99Q4VX62 202 aa8.63□□□□□ -1.03
SEC13-216ENST00000479868 Q6ZRU5 148 aa8.63□□□□□ -1.03
SEC13-216ENST00000479868 LINC00588Q9Y4M8 146 aa8.63□□□□□ -1.03
SEC13-216ENST00000479868 IGLV6-57P01721 117 aa8.61□□□□□ -1.03
SEC13-216ENST00000479868 Q8N814 137 aa8.61□□□□□ -1.03
SEC13-216ENST00000479868 COL7A1Q02388 2944 aa8.61□□□□□ -1.03
SEC13-216ENST00000479868 SNCGO76070 127 aa8.61□□□□□ -1.03
SEC13-216ENST00000479868 TTC32Q5I0X7 151 aa8.6□□□□□ -1.03
SEC13-216ENST00000479868 C2orf48Q96LS8 159 aa8.6□□□□□ -1.03
SEC13-216ENST00000479868 LINC00167Q96N53 147 aa8.6□□□□□ -1.03
SEC13-216ENST00000479868 ORMDL1Q9P0S3 153 aa8.6□□□□□ -1.03
SEC13-216ENST00000479868 INAFM2P0DMQ5 153 aa8.59□□□□□ -1.03
SEC13-216ENST00000479868 A0A1B0GX51 115 aa8.59□□□□□ -1.03
SEC13-216ENST00000479868 NHLRC4P0CG21 123 aaPredicted RBP8.59□□□□□ -1.03
SEC13-216ENST00000479868 STAB2Q8WWQ8 2551 aa8.59□□□□□ -1.03
SEC13-216ENST00000479868 TRBV10-3A0A0K0K1G6 114 aa8.58□□□□□ -1.04
SEC13-216ENST00000479868 OBSCN-AS1Q96MR7 158 aa8.58□□□□□ -1.04
SEC13-216ENST00000479868 C14orf132Q9NPU4 83 aa8.58□□□□□ -1.04
SEC13-216ENST00000479868 ACYP1P07311 99 aa8.57□□□□□ -1.04
SEC13-216ENST00000479868 NDUFC2-KCTD14E9PQ53 114 aa8.57□□□□□ -1.04
SEC13-216ENST00000479868 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
SEC13-216ENST00000479868 VPREB1P12018 145 aa8.56□□□□□ -1.04
SEC13-216ENST00000479868 GAGE2EQ4V326 116 aa8.56□□□□□ -1.04
SEC13-216ENST00000479868 LINC00575Q6W349 94 aa8.56□□□□□ -1.04
SEC13-216ENST00000479868 Q6ZRP5 223 aa8.56□□□□□ -1.04
SEC13-216ENST00000479868 SMCR5Q8TEV8 140 aa8.56□□□□□ -1.04
SEC13-216ENST00000479868 MDFIQ99750 246 aa8.56□□□□□ -1.04
SEC13-216ENST00000479868 GAGE2DQ9UEU5 116 aa8.56□□□□□ -1.04
SEC13-216ENST00000479868 LYSTQ99698 3801 aa8.56□□□□□ -1.04
SEC13-216ENST00000479868 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
SEC13-216ENST00000479868 CCDC179H3BU77 68 aa8.55□□□□□ -1.04
SEC13-216ENST00000479868 SYCNQ0VAF6 134 aa8.55□□□□□ -1.04
SEC13-216ENST00000479868 DNAH1Q9P2D7 4330 aa8.55□□□□□ -1.04
SEC13-216ENST00000479868 GAGE2BQ13066 116 aa8.55□□□□□ -1.04
SEC13-216ENST00000479868 CASC10Q5T4H9 136 aa8.55□□□□□ -1.04
SEC13-216ENST00000479868 TRAV23DV6A0A075B6W5 121 aa8.54□□□□□ -1.04
SEC13-216ENST00000479868 hADV29S1A0JD25 119 aa8.53□□□□□ -1.04
SEC13-216ENST00000479868 TMEM256-PLSCR3K7ERE1 68 aa8.53□□□□□ -1.04
SEC13-216ENST00000479868 SDIM1Q6ZPB5 146 aa8.53□□□□□ -1.04
SEC13-216ENST00000479868 ZNF73O43830 326 aaPredicted RBP8.51□□□□□ -1.05
SEC13-216ENST00000479868 Q6Q795 121 aa8.51□□□□□ -1.05
SEC13-216ENST00000479868 DIRC1Q969H9 104 aa8.51□□□□□ -1.05
SEC13-216ENST00000479868 UPK3BQ9BT76 320 aa8.51□□□□□ -1.05
SEC13-216ENST00000479868 USP17L23D6RBM5 183 aa8.51□□□□□ -1.05
SEC13-216ENST00000479868 M0R378 163 aa8.51□□□□□ -1.05
SEC13-216ENST00000479868 NDUFV3P56181 108 aaKnown RBP8.51□□□□□ -1.05
SEC13-216ENST00000479868 DNAH9Q9NYC9 4486 aa8.51□□□□□ -1.05
SEC13-216ENST00000479868 TRBV7-7A0A0K0K1E9 115 aa8.48□□□□□ -1.05
SEC13-216ENST00000479868 JMJD7-PLA2G4BH0Y9G9 81 aa8.48□□□□□ -1.05
SEC13-216ENST00000479868 Q6ZQY7 126 aa8.48□□□□□ -1.05
SEC13-216ENST00000479868 LINC00643Q86TS7 51 aa8.48□□□□□ -1.05
SEC13-216ENST00000479868 ELOF1P60002 83 aaKnown RBP8.48□□□□□ -1.05
SEC13-216ENST00000479868 COX7BP24311 80 aa8.47□□□□□ -1.05
SEC13-216ENST00000479868 SERTAD4-AS1Q5TG53 156 aa8.47□□□□□ -1.05
SEC13-216ENST00000479868 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
SEC13-216ENST00000479868 RMI2Q96E14 147 aa8.47□□□□□ -1.05
SEC13-216ENST00000479868 LINC00846Q9NV44 126 aa8.47□□□□□ -1.05
SEC13-216ENST00000479868 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.06
SEC13-216ENST00000479868 KRTAP1-5Q9BYS1 174 aa8.46□□□□□ -1.06
SEC13-216ENST00000479868 CCKP06307 115 aa8.46□□□□□ -1.06
SEC13-216ENST00000479868 FAM19A5Q7Z5A7 132 aaPredicted RBP8.46□□□□□ -1.06
SEC13-216ENST00000479868 TRBV7-6A0A0J9YX20 115 aa8.45□□□□□ -1.06
SEC13-216ENST00000479868 TENM2Q9NT68 2774 aa8.45□□□□□ -1.06
SEC13-216ENST00000479868 J3KT08 172 aa8.44□□□□□ -1.06
SEC13-216ENST00000479868 NKAPP1Q8N9T2 125 aa8.44□□□□□ -1.06
SEC13-216ENST00000479868 B9D2Q9BPU9 175 aa8.44□□□□□ -1.06
SEC13-216ENST00000479868 DNAH10Q8IVF4 4471 aa8.44□□□□□ -1.06
SEC13-216ENST00000479868 DNAH7Q8WXX0 4024 aa8.43□□□□□ -1.06
SEC13-216ENST00000479868 FAM168BA1KXE4 195 aa8.43□□□□□ -1.06
SEC13-216ENST00000479868 LINC00528Q8N1L1 170 aa8.43□□□□□ -1.06
SEC13-216ENST00000479868 C7orf33Q8WU49 177 aa8.43□□□□□ -1.06
SEC13-216ENST00000479868 LAMTOR3Q9UHA4 124 aa8.43□□□□□ -1.06
SEC13-216ENST00000479868 IMUPQ9GZP8 106 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 409.9 ms