RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 SERTAD4-AS1Q5TG53 156 aa6.39□□□□□ -1.39
HDAC6-222ENST00000478095 ERG28Q9UKR5 140 aa6.39□□□□□ -1.39
HDAC6-222ENST00000478095 TSPEAR-AS2P59090 65 aa6.38□□□□□ -1.39
HDAC6-222ENST00000478095 KRTDAPP60985 99 aa6.38□□□□□ -1.39
HDAC6-222ENST00000478095 A0A0U1RRA0 63 aa6.37□□□□□ -1.39
HDAC6-222ENST00000478095 C3orf79P0CE67 100 aa6.37□□□□□ -1.39
HDAC6-222ENST00000478095 HERVK_113P61574 105 aa6.37□□□□□ -1.39
HDAC6-222ENST00000478095 SFTA2Q6UW10 78 aa6.37□□□□□ -1.39
HDAC6-222ENST00000478095 PET117Q6UWS5 81 aa6.37□□□□□ -1.39
HDAC6-222ENST00000478095 KRTAP11-1Q8IUC1 163 aa6.37□□□□□ -1.39
HDAC6-222ENST00000478095 NDUFA12Q9UI09 145 aa6.37□□□□□ -1.39
HDAC6-222ENST00000478095 MYCBP2O75592 4640 aa6.36□□□□□ -1.39
HDAC6-222ENST00000478095 LEPROTO15243 131 aa6.36□□□□□ -1.39
HDAC6-222ENST00000478095 LINC00158P58513 81 aa6.36□□□□□ -1.39
HDAC6-222ENST00000478095 UBE2BP63146 152 aa6.36□□□□□ -1.39
HDAC6-222ENST00000478095 LINC01545Q5VT33 79 aa6.36□□□□□ -1.39
HDAC6-222ENST00000478095 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
HDAC6-222ENST00000478095 PLA2G2DQ9UNK4 145 aa6.36□□□□□ -1.39
HDAC6-222ENST00000478095 FLG2Q5D862 2391 aaPredicted RBP6.35□□□□□ -1.39
HDAC6-222ENST00000478095 J3QQQ9 107 aa6.35□□□□□ -1.39
HDAC6-222ENST00000478095 MEIG1Q5JSS6 88 aa6.35□□□□□ -1.39
HDAC6-222ENST00000478095 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
HDAC6-222ENST00000478095 PLEKHB2Q96CS7 222 aa6.35□□□□□ -1.39
HDAC6-222ENST00000478095 SND1-IT1Q9HBX3 110 aa6.35□□□□□ -1.39
HDAC6-222ENST00000478095 C22orf24Q9Y442 160 aa6.35□□□□□ -1.39
HDAC6-222ENST00000478095 MYMXA0A1B0GTQ4 84 aa6.34□□□□□ -1.39
HDAC6-222ENST00000478095 SMIM13P0DJ93 91 aa6.34□□□□□ -1.39
HDAC6-222ENST00000478095 LGALS3P17931 250 aaKnown RBP6.34□□□□□ -1.39
HDAC6-222ENST00000478095 HERV-K104P63124 156 aa6.34□□□□□ -1.39
HDAC6-222ENST00000478095 COX17Q14061 63 aa6.34□□□□□ -1.39
HDAC6-222ENST00000478095 C1orf137Q5JT78 98 aa6.34□□□□□ -1.39
HDAC6-222ENST00000478095 HIST3H2BBQ8N257 126 aa6.34□□□□□ -1.39
HDAC6-222ENST00000478095 GAGE10A6NGK3 116 aa6.33□□□□□ -1.4
HDAC6-222ENST00000478095 S100A6P06703 90 aa6.33□□□□□ -1.4
HDAC6-222ENST00000478095 S100A2P29034 98 aa6.33□□□□□ -1.4
HDAC6-222ENST00000478095 HIST1H2BLQ99880 126 aa6.33□□□□□ -1.4
HDAC6-222ENST00000478095 C20orf202A1L168 122 aa6.32□□□□□ -1.4
HDAC6-222ENST00000478095 E9PLD3 99 aa6.32□□□□□ -1.4
HDAC6-222ENST00000478095 LBHQ53QV2 105 aaPredicted RBP6.32□□□□□ -1.4
HDAC6-222ENST00000478095 MRPL55Q7Z7F7 128 aaKnown RBP6.32□□□□□ -1.4
HDAC6-222ENST00000478095 ATOH7Q8N100 152 aa6.32□□□□□ -1.4
HDAC6-222ENST00000478095 MIR7-3HGQ8N6C7 128 aa6.32□□□□□ -1.4
HDAC6-222ENST00000478095 NKAPP1Q8N9T2 125 aa6.32□□□□□ -1.4
HDAC6-222ENST00000478095 Q8NDZ9 215 aa6.32□□□□□ -1.4
HDAC6-222ENST00000478095 RPL37AP8A6NKH3 93 aa6.31□□□□□ -1.4
HDAC6-222ENST00000478095 VPREB1P12018 145 aa6.31□□□□□ -1.4
HDAC6-222ENST00000478095 SNRPEP62304 92 aaKnown RBP6.31□□□□□ -1.4
HDAC6-222ENST00000478095 DAND5Q8N907 189 aa6.31□□□□□ -1.4
HDAC6-222ENST00000478095 LINC00167Q96N53 147 aa6.31□□□□□ -1.4
HDAC6-222ENST00000478095 TP73-AS1Q9UF72 201 aa6.31□□□□□ -1.4
HDAC6-222ENST00000478095 IGLV5-37A0A075B6J1 123 aa6.3□□□□□ -1.4
HDAC6-222ENST00000478095 IGKV2D-26A0A0A0MRZ7 120 aa6.3□□□□□ -1.4
HDAC6-222ENST00000478095 NMUP48645 174 aa6.3□□□□□ -1.4
HDAC6-222ENST00000478095 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
HDAC6-222ENST00000478095 IGKV2-28A0A075B6P5 120 aa6.29□□□□□ -1.4
HDAC6-222ENST00000478095 LINC00587B1AMM8 73 aa6.29□□□□□ -1.4
HDAC6-222ENST00000478095 IGKV2D-28P01615 120 aa6.29□□□□□ -1.4
HDAC6-222ENST00000478095 IGLV7-43P04211 117 aa6.29□□□□□ -1.4
HDAC6-222ENST00000478095 TTTY13Q9BZ97 58 aa6.29□□□□□ -1.4
HDAC6-222ENST00000478095 A0A0J9YXY3 114 aa6.28□□□□□ -1.4
HDAC6-222ENST00000478095 KRTAP29-1A8MX34 341 aaPredicted RBP6.28□□□□□ -1.4
HDAC6-222ENST00000478095 RPL24P83731 157 aaKnown RBP6.28□□□□□ -1.4
HDAC6-222ENST00000478095 SRSF9Q13242 221 aaKnown RBP eCLIP6.28□□□□□ -1.4
HDAC6-222ENST00000478095 SPINK6Q6UWN8 80 aa6.28□□□□□ -1.4
HDAC6-222ENST00000478095 BOD1L2Q8IYS8 172 aa6.28□□□□□ -1.4
HDAC6-222ENST00000478095 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
HDAC6-222ENST00000478095 PKHD1L1Q86WI1 4243 aa6.27□□□□□ -1.41
HDAC6-222ENST00000478095 C5orf52A6NGY3 159 aa6.27□□□□□ -1.41
HDAC6-222ENST00000478095 ZNF815PA8K554 130 aa6.27□□□□□ -1.41
HDAC6-222ENST00000478095 NCR3O14931 201 aa6.27□□□□□ -1.41
HDAC6-222ENST00000478095 FAT3Q8TDW7 4589 aa6.27□□□□□ -1.41
HDAC6-222ENST00000478095 KRTAP9-7A8MTY7 169 aa6.26□□□□□ -1.41
HDAC6-222ENST00000478095 OXTP01178 125 aa6.26□□□□□ -1.41
HDAC6-222ENST00000478095 NPC2P61916 151 aa6.26□□□□□ -1.41
HDAC6-222ENST00000478095 ADAMTSL4-AS1Q5T5F5 129 aa6.25□□□□□ -1.41
HDAC6-222ENST00000478095 HERC1Q15751 4861 aa6.25□□□□□ -1.41
HDAC6-222ENST00000478095 IGLV1-50A0A075B6I6 118 aa6.24□□□□□ -1.41
HDAC6-222ENST00000478095 TMEM238C9JI98 176 aa6.24□□□□□ -1.41
HDAC6-222ENST00000478095 BCE1O60756 84 aa6.24□□□□□ -1.41
HDAC6-222ENST00000478095 MIEN1Q9BRT3 115 aa6.24□□□□□ -1.41
HDAC6-222ENST00000478095 M0R378 163 aa6.23□□□□□ -1.41
HDAC6-222ENST00000478095 AKR1D1P51857 326 aa6.23□□□□□ -1.41
HDAC6-222ENST00000478095 REG3GQ6UW15 175 aa6.23□□□□□ -1.41
HDAC6-222ENST00000478095 SOSTDC1Q6X4U4 206 aa6.23□□□□□ -1.41
HDAC6-222ENST00000478095 PCP2Q8IVA1 136 aa6.23□□□□□ -1.41
HDAC6-222ENST00000478095 DIRC1Q969H9 104 aa6.23□□□□□ -1.41
HDAC6-222ENST00000478095 LITAFQ99732 161 aa6.23□□□□□ -1.41
HDAC6-222ENST00000478095 DMBT1Q9UGM3 2413 aaPredicted RBP6.23□□□□□ -1.41
HDAC6-222ENST00000478095 H0Y9J4 135 aa6.22□□□□□ -1.41
HDAC6-222ENST00000478095 ZNF861PO60384 105 aa6.22□□□□□ -1.41
HDAC6-222ENST00000478095 SCGB1D1O95968 90 aa6.22□□□□□ -1.41
HDAC6-222ENST00000478095 UBE2AP49459 152 aa6.22□□□□□ -1.41
HDAC6-222ENST00000478095 SCGB1D4Q6XE38 83 aa6.22□□□□□ -1.41
HDAC6-222ENST00000478095 TMEM126AQ9H061 195 aa6.22□□□□□ -1.41
HDAC6-222ENST00000478095 TMA7Q9Y2S6 64 aaKnown RBP6.22□□□□□ -1.41
HDAC6-222ENST00000478095 LOC107984156A0A0G2JMH3 177 aa6.21□□□□□ -1.42
HDAC6-222ENST00000478095 HSBP1L1C9JCN9 74 aa6.21□□□□□ -1.42
HDAC6-222ENST00000478095 TIMM17BO60830 172 aa6.21□□□□□ -1.42
HDAC6-222ENST00000478095 MT1HL1P0DM35 61 aa6.21□□□□□ -1.42
HDAC6-222ENST00000478095 PRLHP81277 87 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms