RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 PLA2G2DQ9UNK4 145 aa8.22□□□□□ -1.09
TOP3A-205ENST00000477508 SRRM2Q9UQ35 2752 aaKnown RBP8.22□□□□□ -1.09
TOP3A-205ENST00000477508 FAM168BA1KXE4 195 aa8.21□□□□□ -1.1
TOP3A-205ENST00000477508 C5orf52A6NGY3 159 aa8.21□□□□□ -1.1
TOP3A-205ENST00000477508 LINC00158P58513 81 aa8.21□□□□□ -1.1
TOP3A-205ENST00000477508 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.1
TOP3A-205ENST00000477508 M0QXV9 152 aa8.2□□□□□ -1.1
TOP3A-205ENST00000477508 LBHQ53QV2 105 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-205ENST00000477508 MEIG1Q5JSS6 88 aa8.2□□□□□ -1.1
TOP3A-205ENST00000477508 SND1-IT1Q9HBX3 110 aa8.2□□□□□ -1.1
TOP3A-205ENST00000477508 TP73-AS1Q9UF72 201 aa8.2□□□□□ -1.1
TOP3A-205ENST00000477508 ABCA13Q86UQ4 5058 aa8.19□□□□□ -1.1
TOP3A-205ENST00000477508 INAFM2P0DMQ5 153 aa8.19□□□□□ -1.1
TOP3A-205ENST00000477508 TSPEAR-AS2P59090 65 aa8.19□□□□□ -1.1
TOP3A-205ENST00000477508 KRTAP10-4P60372 401 aaPredicted RBP8.18□□□□□ -1.1
TOP3A-205ENST00000477508 RPL24P83731 157 aaKnown RBP8.18□□□□□ -1.1
TOP3A-205ENST00000477508 PHF5AQ7RTV0 110 aaKnown RBP8.18□□□□□ -1.1
TOP3A-205ENST00000477508 IGLV5-37A0A075B6J1 123 aa8.17□□□□□ -1.1
TOP3A-205ENST00000477508 SMIM13P0DJ93 91 aa8.17□□□□□ -1.1
TOP3A-205ENST00000477508 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
TOP3A-205ENST00000477508 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
TOP3A-205ENST00000477508 C22orf24Q9Y442 160 aa8.17□□□□□ -1.1
TOP3A-205ENST00000477508 UBE2BP63146 152 aa8.16□□□□□ -1.1
TOP3A-205ENST00000477508 PRR3P79522 188 aaKnown RBP8.16□□□□□ -1.1
TOP3A-205ENST00000477508 MRPL55Q7Z7F7 128 aaKnown RBP8.16□□□□□ -1.1
TOP3A-205ENST00000477508 NKAPP1Q8N9T2 125 aa8.16□□□□□ -1.1
TOP3A-205ENST00000477508 A0A0U1RRA0 63 aa8.15□□□□□ -1.1
TOP3A-205ENST00000477508 MIR7-3HGQ8N6C7 128 aa8.15□□□□□ -1.1
TOP3A-205ENST00000477508 ATOH7Q8N100 152 aa8.14□□□□□ -1.11
TOP3A-205ENST00000477508 PSORS1C2Q9UIG4 136 aa8.14□□□□□ -1.11
TOP3A-205ENST00000477508 A0A0J9YXY3 114 aa8.13□□□□□ -1.11
TOP3A-205ENST00000477508 HSBP1L1C9JCN9 74 aa8.13□□□□□ -1.11
TOP3A-205ENST00000477508 C21orf62-AS1Q17RA5 79 aa8.13□□□□□ -1.11
TOP3A-205ENST00000477508 IGKV2D-26A0A0A0MRZ7 120 aa8.12□□□□□ -1.11
TOP3A-205ENST00000477508 ZNF815PA8K554 130 aa8.12□□□□□ -1.11
TOP3A-205ENST00000477508 TIMM17BO60830 172 aa8.12□□□□□ -1.11
TOP3A-205ENST00000477508 VPREB1P12018 145 aa8.12□□□□□ -1.11
TOP3A-205ENST00000477508 LOC107984156A0A0G2JMH3 177 aa8.11□□□□□ -1.11
TOP3A-205ENST00000477508 SCGB1D1O95968 90 aa8.11□□□□□ -1.11
TOP3A-205ENST00000477508 C1orf137Q5JT78 98 aa8.11□□□□□ -1.11
TOP3A-205ENST00000477508 ARL17AQ8IVW1 177 aa8.11□□□□□ -1.11
TOP3A-205ENST00000477508 BOD1L2Q8IYS8 172 aa8.11□□□□□ -1.11
TOP3A-205ENST00000477508 LINC00167Q96N53 147 aa8.11□□□□□ -1.11
TOP3A-205ENST00000477508 MIEN1Q9BRT3 115 aa8.11□□□□□ -1.11
TOP3A-205ENST00000477508 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
TOP3A-205ENST00000477508 SPINK6Q6UWN8 80 aa8.09□□□□□ -1.11
TOP3A-205ENST00000477508 GAGE10A6NGK3 116 aa8.08□□□□□ -1.12
TOP3A-205ENST00000477508 M0R378 163 aa8.08□□□□□ -1.12
TOP3A-205ENST00000477508 SCGB1D4Q6XE38 83 aa8.08□□□□□ -1.12
TOP3A-205ENST00000477508 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
TOP3A-205ENST00000477508 DAND5Q8N907 189 aa8.08□□□□□ -1.12
TOP3A-205ENST00000477508 RPL37AP8A6NKH3 93 aa8.07□□□□□ -1.12
TOP3A-205ENST00000477508 IGLV7-43P04211 117 aa8.07□□□□□ -1.12
TOP3A-205ENST00000477508 HNRNPA3P51991 378 aaKnown RBP8.07□□□□□ -1.12
TOP3A-205ENST00000477508 SRSF9Q13242 221 aaKnown RBP eCLIP8.07□□□□□ -1.12
TOP3A-205ENST00000477508 PKHD1L1Q86WI1 4243 aa8.06□□□□□ -1.12
TOP3A-205ENST00000477508 TMEM238C9JI98 176 aa8.06□□□□□ -1.12
TOP3A-205ENST00000477508 NDUFC2O95298 119 aa8.06□□□□□ -1.12
TOP3A-205ENST00000477508 ADAMTSL4-AS1Q5T5F5 129 aa8.06□□□□□ -1.12
TOP3A-205ENST00000477508 Q8NDZ9 215 aa8.06□□□□□ -1.12
TOP3A-205ENST00000477508 COPS9Q8WXC6 57 aa8.06□□□□□ -1.12
TOP3A-205ENST00000477508 TTTY13Q9BZ97 58 aa8.06□□□□□ -1.12
TOP3A-205ENST00000477508 IGLV1-50A0A075B6I6 118 aa8.05□□□□□ -1.12
TOP3A-205ENST00000477508 TRBV10-2A0A0K0K1G8 114 aa8.05□□□□□ -1.12
TOP3A-205ENST00000477508 BCE1O60756 84 aa8.05□□□□□ -1.12
TOP3A-205ENST00000477508 OXTP01178 125 aa8.05□□□□□ -1.12
TOP3A-205ENST00000477508 Q6ZVH6 145 aa8.05□□□□□ -1.12
TOP3A-205ENST00000477508 PCP2Q8IVA1 136 aa8.05□□□□□ -1.12
TOP3A-205ENST00000477508 LITAFQ99732 161 aa8.05□□□□□ -1.12
TOP3A-205ENST00000477508 IGKV2-28A0A075B6P5 120 aa8.04□□□□□ -1.12
TOP3A-205ENST00000477508 IGKV2D-28P01615 120 aa8.04□□□□□ -1.12
TOP3A-205ENST00000477508 S100A12P80511 92 aa8.04□□□□□ -1.12
TOP3A-205ENST00000477508 JOSD1Q15040 202 aaPredicted RBP8.04□□□□□ -1.12
TOP3A-205ENST00000477508 REG3GQ6UW15 175 aa8.04□□□□□ -1.12
TOP3A-205ENST00000477508 DIRC1Q969H9 104 aa8.04□□□□□ -1.12
TOP3A-205ENST00000477508 SPANXB1Q9NS25 103 aaPredicted RBP8.04□□□□□ -1.12
TOP3A-205ENST00000477508 LINC00308Q8TCZ7 52 aa8.03□□□□□ -1.12
TOP3A-205ENST00000477508 SPANXDQ9BXN6 97 aa8.03□□□□□ -1.12
TOP3A-205ENST00000477508 PPDPFQ9H3Y8 114 aa8.03□□□□□ -1.12
TOP3A-205ENST00000477508 SPANXCQ9NY87 97 aa8.03□□□□□ -1.12
TOP3A-205ENST00000477508 KRTAP29-1A8MX34 341 aaPredicted RBP8.02□□□□□ -1.13
TOP3A-205ENST00000477508 NCR3O14931 201 aa8.02□□□□□ -1.13
TOP3A-205ENST00000477508 ZNF861PO60384 105 aa8.02□□□□□ -1.13
TOP3A-205ENST00000477508 IFITM1P13164 125 aa8.02□□□□□ -1.13
TOP3A-205ENST00000477508 RPL28P46779 137 aaKnown RBP8.02□□□□□ -1.13
TOP3A-205ENST00000477508 MYCBP2O75592 4640 aa8.01□□□□□ -1.13
TOP3A-205ENST00000477508 NPC2P61916 151 aa8.01□□□□□ -1.13
TOP3A-205ENST00000477508 SOSTDC1Q6X4U4 206 aa8.01□□□□□ -1.13
TOP3A-205ENST00000477508 CBY1Q9Y3M2 126 aa8.01□□□□□ -1.13
TOP3A-205ENST00000477508 PRYO14603 147 aa8□□□□□ -1.13
TOP3A-205ENST00000477508 VAMP8Q9BV40 100 aa8□□□□□ -1.13
TOP3A-205ENST00000477508 TMEM126AQ9H061 195 aa8□□□□□ -1.13
TOP3A-205ENST00000477508 H0Y9J4 135 aa7.99□□□□□ -1.13
TOP3A-205ENST00000477508 COX8AP10176 69 aa7.99□□□□□ -1.13
TOP3A-205ENST00000477508 UBE2AP49459 152 aa7.99□□□□□ -1.13
TOP3A-205ENST00000477508 S100A7L2Q5SY68 101 aa7.99□□□□□ -1.13
TOP3A-205ENST00000477508 LINC00518Q8N0U6 118 aa7.99□□□□□ -1.13
TOP3A-205ENST00000477508 KCNQ1DNQ9H478 68 aa7.99□□□□□ -1.13
TOP3A-205ENST00000477508 TRBV10-3A0A0K0K1G6 114 aa7.98□□□□□ -1.13
TOP3A-205ENST00000477508 DLEU1O43261 78 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms