RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 PLA2G2DQ9UNK4 145 aa7.68□□□□□ -1.18
CLCNKA-205ENST00000477360 HSBP1L1C9JCN9 74 aa7.67□□□□□ -1.18
CLCNKA-205ENST00000477360 C9orf129Q5T035 196 aaKnown RBP7.67□□□□□ -1.18
CLCNKA-205ENST00000477360 SPINK6Q6UWN8 80 aa7.67□□□□□ -1.18
CLCNKA-205ENST00000477360 ERG28Q9UKR5 140 aa7.67□□□□□ -1.18
CLCNKA-205ENST00000477360 HNRNPA3P51991 378 aaKnown RBP7.65□□□□□ -1.18
CLCNKA-205ENST00000477360 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.18
CLCNKA-205ENST00000477360 LBHQ53QV2 105 aaPredicted RBP7.65□□□□□ -1.18
CLCNKA-205ENST00000477360 PKHD1L1Q86WI1 4243 aa7.64□□□□□ -1.19
CLCNKA-205ENST00000477360 IGLV5-37A0A075B6J1 123 aa7.64□□□□□ -1.19
CLCNKA-205ENST00000477360 J3QL48 77 aa7.64□□□□□ -1.19
CLCNKA-205ENST00000477360 M0QXV9 152 aa7.64□□□□□ -1.19
CLCNKA-205ENST00000477360 TIMM17BO60830 172 aa7.64□□□□□ -1.19
CLCNKA-205ENST00000477360 PHF5AQ7RTV0 110 aaKnown RBP7.64□□□□□ -1.19
CLCNKA-205ENST00000477360 KRTAP7-1Q8IUC3 87 aa7.64□□□□□ -1.19
CLCNKA-205ENST00000477360 PSORS1C2Q9UIG4 136 aa7.64□□□□□ -1.19
CLCNKA-205ENST00000477360 A0A0J9YXY3 114 aa7.63□□□□□ -1.19
CLCNKA-205ENST00000477360 FAM168BA1KXE4 195 aa7.63□□□□□ -1.19
CLCNKA-205ENST00000477360 ZNF815PA8K554 130 aa7.63□□□□□ -1.19
CLCNKA-205ENST00000477360 FAM19A5Q7Z5A7 132 aaPredicted RBP7.63□□□□□ -1.19
CLCNKA-205ENST00000477360 VAMP8Q9BV40 100 aa7.63□□□□□ -1.19
CLCNKA-205ENST00000477360 MEIG1Q5JSS6 88 aa7.62□□□□□ -1.19
CLCNKA-205ENST00000477360 TTTY13Q9BZ97 58 aa7.62□□□□□ -1.19
CLCNKA-205ENST00000477360 LOC107984156A0A0G2JMH3 177 aa7.61□□□□□ -1.19
CLCNKA-205ENST00000477360 DLEU1O43261 78 aa7.61□□□□□ -1.19
CLCNKA-205ENST00000477360 SMIM13P0DJ93 91 aa7.61□□□□□ -1.19
CLCNKA-205ENST00000477360 PFN2P35080 140 aa7.61□□□□□ -1.19
CLCNKA-205ENST00000477360 LINC00158P58513 81 aa7.61□□□□□ -1.19
CLCNKA-205ENST00000477360 REG3GQ6UW15 175 aa7.61□□□□□ -1.19
CLCNKA-205ENST00000477360 PCP2Q8IVA1 136 aa7.61□□□□□ -1.19
CLCNKA-205ENST00000477360 ARL17AQ8IVW1 177 aa7.61□□□□□ -1.19
CLCNKA-205ENST00000477360 BOD1L2Q8IYS8 172 aa7.61□□□□□ -1.19
CLCNKA-205ENST00000477360 XAGE1AQ9HD64 81 aa7.61□□□□□ -1.19
CLCNKA-205ENST00000477360 C22orf24Q9Y442 160 aa7.61□□□□□ -1.19
CLCNKA-205ENST00000477360 SMIM6P0DI80 62 aa7.6□□□□□ -1.19
CLCNKA-205ENST00000477360 COX8AP10176 69 aa7.6□□□□□ -1.19
CLCNKA-205ENST00000477360 SPATA45Q537H7 98 aa7.6□□□□□ -1.19
CLCNKA-205ENST00000477360 MRPL55Q7Z7F7 128 aaKnown RBP7.6□□□□□ -1.19
CLCNKA-205ENST00000477360 LITAFQ99732 161 aa7.6□□□□□ -1.19
CLCNKA-205ENST00000477360 PAM16Q9Y3D7 125 aa7.6□□□□□ -1.19
CLCNKA-205ENST00000477360 IGLV7-43P04211 117 aa7.59□□□□□ -1.19
CLCNKA-205ENST00000477360 UBE2BP63146 152 aa7.59□□□□□ -1.19
CLCNKA-205ENST00000477360 RPL24P83731 157 aaKnown RBP7.59□□□□□ -1.19
CLCNKA-205ENST00000477360 C1orf137Q5JT78 98 aa7.59□□□□□ -1.19
CLCNKA-205ENST00000477360 SERTAD4-AS1Q5TG53 156 aa7.59□□□□□ -1.19
CLCNKA-205ENST00000477360 LINC00518Q8N0U6 118 aa7.59□□□□□ -1.19
CLCNKA-205ENST00000477360 MIR7-3HGQ8N6C7 128 aa7.59□□□□□ -1.19
CLCNKA-205ENST00000477360 LINC01600Q96MT4 127 aa7.59□□□□□ -1.19
CLCNKA-205ENST00000477360 PPDPFQ9H3Y8 114 aa7.59□□□□□ -1.19
CLCNKA-205ENST00000477360 SND1-IT1Q9HBX3 110 aa7.59□□□□□ -1.19
CLCNKA-205ENST00000477360 FAT3Q8TDW7 4589 aa7.58□□□□□ -1.2
CLCNKA-205ENST00000477360 Q6ZVH6 145 aa7.58□□□□□ -1.2
CLCNKA-205ENST00000477360 DIRC1Q969H9 104 aa7.58□□□□□ -1.2
CLCNKA-205ENST00000477360 LRP1Q07954 4544 aaKnown RBP7.58□□□□□ -1.2
CLCNKA-205ENST00000477360 TMEM238C9JI98 176 aa7.57□□□□□ -1.2
CLCNKA-205ENST00000477360 S100A12P80511 92 aa7.57□□□□□ -1.2
CLCNKA-205ENST00000477360 SCGB1D4Q6XE38 83 aa7.57□□□□□ -1.2
CLCNKA-205ENST00000477360 SPANXDQ9BXN6 97 aa7.57□□□□□ -1.2
CLCNKA-205ENST00000477360 SPANXCQ9NY87 97 aa7.57□□□□□ -1.2
CLCNKA-205ENST00000477360 HERC1Q15751 4861 aa7.57□□□□□ -1.2
CLCNKA-205ENST00000477360 A0A0U1RRA0 63 aa7.56□□□□□ -1.2
CLCNKA-205ENST00000477360 ADAMTSL4-AS1Q5T5F5 129 aa7.56□□□□□ -1.2
CLCNKA-205ENST00000477360 NKAPP1Q8N9T2 125 aa7.56□□□□□ -1.2
CLCNKA-205ENST00000477360 SPANXB1Q9NS25 103 aaPredicted RBP7.56□□□□□ -1.2
CLCNKA-205ENST00000477360 SLC25A34Q6PIV7 304 aa7.55□□□□□ -1.2
CLCNKA-205ENST00000477360 KRTAP11-1Q8IUC1 163 aa7.55□□□□□ -1.2
CLCNKA-205ENST00000477360 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
CLCNKA-205ENST00000477360 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
CLCNKA-205ENST00000477360 VPREB1P12018 145 aa7.54□□□□□ -1.2
CLCNKA-205ENST00000477360 IFITM1P13164 125 aa7.54□□□□□ -1.2
CLCNKA-205ENST00000477360 C14orf144Q96I85 54 aa7.54□□□□□ -1.2
CLCNKA-205ENST00000477360 HIGD1BQ9P298 99 aa7.54□□□□□ -1.2
CLCNKA-205ENST00000477360 H0Y9J4 135 aa7.53□□□□□ -1.2
CLCNKA-205ENST00000477360 ZNF861PO60384 105 aa7.53□□□□□ -1.2
CLCNKA-205ENST00000477360 NDUFC2O95298 119 aa7.53□□□□□ -1.2
CLCNKA-205ENST00000477360 DAND5Q8N907 189 aa7.53□□□□□ -1.2
CLCNKA-205ENST00000477360 LINC00308Q8TCZ7 52 aa7.53□□□□□ -1.2
CLCNKA-205ENST00000477360 COPS9Q8WXC6 57 aa7.53□□□□□ -1.2
CLCNKA-205ENST00000477360 BCE1O60756 84 aa7.52□□□□□ -1.21
CLCNKA-205ENST00000477360 SOSTDC1Q6X4U4 206 aa7.52□□□□□ -1.21
CLCNKA-205ENST00000477360 MIEN1Q9BRT3 115 aa7.52□□□□□ -1.21
CLCNKA-205ENST00000477360 RPL28P46779 137 aaKnown RBP7.51□□□□□ -1.21
CLCNKA-205ENST00000477360 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
CLCNKA-205ENST00000477360 C2orf91Q6ZV80 131 aa7.51□□□□□ -1.21
CLCNKA-205ENST00000477360 Q8NDZ9 215 aa7.51□□□□□ -1.21
CLCNKA-205ENST00000477360 IGLV1-50A0A075B6I6 118 aa7.5□□□□□ -1.21
CLCNKA-205ENST00000477360 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
CLCNKA-205ENST00000477360 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
CLCNKA-205ENST00000477360 M0R378 163 aa7.49□□□□□ -1.21
CLCNKA-205ENST00000477360 UQCR10Q9UDW1 63 aa7.49□□□□□ -1.21
CLCNKA-205ENST00000477360 TAL2Q16559 108 aa7.48□□□□□ -1.21
CLCNKA-205ENST00000477360 C12orf57Q99622 126 aa7.48□□□□□ -1.21
CLCNKA-205ENST00000477360 RPL37AP8A6NKH3 93 aa7.47□□□□□ -1.21
CLCNKA-205ENST00000477360 KRTAP13-1Q8IUC0 172 aa7.47□□□□□ -1.21
CLCNKA-205ENST00000477360 MUSTN1Q8IVN3 82 aa7.47□□□□□ -1.21
CLCNKA-205ENST00000477360 TNXBP22105 4242 aa7.46□□□□□ -1.21
CLCNKA-205ENST00000477360 GAGE10A6NGK3 116 aa7.46□□□□□ -1.22
CLCNKA-205ENST00000477360 RPL13AP40429 203 aaKnown RBP7.46□□□□□ -1.22
CLCNKA-205ENST00000477360 NPC2P61916 151 aa7.46□□□□□ -1.22
CLCNKA-205ENST00000477360 KRTAP1-4P0C5Y4 121 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms