RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 DAND5Q8N907 189 aa13.89□□□□□ -0.19
MCF2L2-209ENST00000475664 VAMP8Q9BV40 100 aa13.89□□□□□ -0.19
MCF2L2-209ENST00000475664 FAT1Q14517 4588 aa13.89□□□□□ -0.19
MCF2L2-209ENST00000475664 ADAMTSL4-AS1Q5T5F5 129 aa13.88□□□□□ -0.19
MCF2L2-209ENST00000475664 Q8N1X5 172 aa13.88□□□□□ -0.19
MCF2L2-209ENST00000475664 PAM16Q9Y3D7 125 aa13.88□□□□□ -0.19
MCF2L2-209ENST00000475664 M0QXV9 152 aa13.87□□□□□ -0.19
MCF2L2-209ENST00000475664 PHF5AQ7RTV0 110 aaKnown RBP13.87□□□□□ -0.19
MCF2L2-209ENST00000475664 SPATA45Q537H7 98 aa13.86□□□□□ -0.19
MCF2L2-209ENST00000475664 SCGB1D4Q6XE38 83 aa13.86□□□□□ -0.19
MCF2L2-209ENST00000475664 IGLV5-37A0A075B6J1 123 aa13.85□□□□□ -0.19
MCF2L2-209ENST00000475664 VPREB1P12018 145 aa13.85□□□□□ -0.19
MCF2L2-209ENST00000475664 Q8NDZ9 215 aa13.85□□□□□ -0.19
MCF2L2-209ENST00000475664 C22orf24Q9Y442 160 aa13.85□□□□□ -0.19
MCF2L2-209ENST00000475664 LOC107984156A0A0G2JMH3 177 aa13.84□□□□□ -0.19
MCF2L2-209ENST00000475664 ARL17AQ8IVW1 177 aa13.84□□□□□ -0.19
MCF2L2-209ENST00000475664 C7orf33Q8WU49 177 aa13.84□□□□□ -0.19
MCF2L2-209ENST00000475664 TP73-AS1Q9UF72 201 aa13.84□□□□□ -0.19
MCF2L2-209ENST00000475664 COX8AP10176 69 aa13.83□□□□□ -0.2
MCF2L2-209ENST00000475664 RPL24P83731 157 aaKnown RBP13.82□□□□□ -0.2
MCF2L2-209ENST00000475664 Q5VSD8 79 aa13.82□□□□□ -0.2
MCF2L2-209ENST00000475664 BOD1L2Q8IYS8 172 aa13.82□□□□□ -0.2
MCF2L2-209ENST00000475664 TMEM238C9JI98 176 aa13.81□□□□□ -0.2
MCF2L2-209ENST00000475664 FAM229AH3BQW9 127 aa13.81□□□□□ -0.2
MCF2L2-209ENST00000475664 SOSTDC1Q6X4U4 206 aa13.81□□□□□ -0.2
MCF2L2-209ENST00000475664 EIF4EBP3O60516 100 aaPredicted RBP13.8□□□□□ -0.2
MCF2L2-209ENST00000475664 MRPL55Q7Z7F7 128 aaKnown RBP13.8□□□□□ -0.2
MCF2L2-209ENST00000475664 NKAPP1Q8N9T2 125 aa13.8□□□□□ -0.2
MCF2L2-209ENST00000475664 DLEU1O43261 78 aa13.79□□□□□ -0.2
MCF2L2-209ENST00000475664 NPC2P61916 151 aa13.79□□□□□ -0.2
MCF2L2-209ENST00000475664 LBHQ53QV2 105 aaPredicted RBP13.79□□□□□ -0.2
MCF2L2-209ENST00000475664 MIEN1Q9BRT3 115 aa13.79□□□□□ -0.2
MCF2L2-209ENST00000475664 SPANXDQ9BXN6 97 aa13.79□□□□□ -0.2
MCF2L2-209ENST00000475664 SPANXCQ9NY87 97 aa13.79□□□□□ -0.2
MCF2L2-209ENST00000475664 LOC105371267A0A1B0GV96 52 aa13.78□□□□□ -0.2
MCF2L2-209ENST00000475664 LINC00308Q8TCZ7 52 aa13.78□□□□□ -0.2
MCF2L2-209ENST00000475664 C14orf144Q96I85 54 aa13.78□□□□□ -0.2
MCF2L2-209ENST00000475664 RPL37AP61513 92 aaKnown RBP13.77□□□□□ -0.21
MCF2L2-209ENST00000475664 KRTAP11-1Q8IUC1 163 aa13.77□□□□□ -0.21
MCF2L2-209ENST00000475664 KRTAP10-4P60372 401 aaPredicted RBP13.76□□□□□ -0.21
MCF2L2-209ENST00000475664 LINC00167Q96N53 147 aa13.76□□□□□ -0.21
MCF2L2-209ENST00000475664 VPS13BQ7Z7G8 4022 aa13.75□□□□□ -0.21
MCF2L2-209ENST00000475664 PLA2G1BP04054 148 aaKnown RBP13.75□□□□□ -0.21
MCF2L2-209ENST00000475664 UBE2BP63146 152 aa13.75□□□□□ -0.21
MCF2L2-209ENST00000475664 Q6ZVH6 145 aa13.75□□□□□ -0.21
MCF2L2-209ENST00000475664 GAGE10A6NGK3 116 aa13.74□□□□□ -0.21
MCF2L2-209ENST00000475664 PRR3P79522 188 aaKnown RBP13.74□□□□□ -0.21
MCF2L2-209ENST00000475664 NDUFC2O95298 119 aa13.73□□□□□ -0.21
MCF2L2-209ENST00000475664 SLC25A34Q6PIV7 304 aa13.73□□□□□ -0.21
MCF2L2-209ENST00000475664 KRTAP4-5Q9BYR2 181 aa13.73□□□□□ -0.21
MCF2L2-209ENST00000475664 SPANXB1Q9NS25 103 aaPredicted RBP13.73□□□□□ -0.21
MCF2L2-209ENST00000475664 PSORS1C2Q9UIG4 136 aa13.73□□□□□ -0.21
MCF2L2-209ENST00000475664 M0R378 163 aa13.72□□□□□ -0.21
MCF2L2-209ENST00000475664 NCR3O14931 201 aa13.72□□□□□ -0.21
MCF2L2-209ENST00000475664 PPDPFQ9H3Y8 114 aa13.72□□□□□ -0.21
MCF2L2-209ENST00000475664 RPL37AP8A6NKH3 93 aa13.71□□□□□ -0.21
MCF2L2-209ENST00000475664 SMIM6P0DI80 62 aa13.71□□□□□ -0.21
MCF2L2-209ENST00000475664 IFITM1P13164 125 aa13.71□□□□□ -0.21
MCF2L2-209ENST00000475664 S100A12P80511 92 aa13.71□□□□□ -0.21
MCF2L2-209ENST00000475664 TRBV10-2A0A0K0K1G8 114 aa13.69□□□□□ -0.22
MCF2L2-209ENST00000475664 COPS9Q8WXC6 57 aa13.69□□□□□ -0.22
MCF2L2-209ENST00000475664 IGLV1-50A0A075B6I6 118 aa13.68□□□□□ -0.22
MCF2L2-209ENST00000475664 SRSF9Q13242 221 aaKnown RBP eCLIP13.68□□□□□ -0.22
MCF2L2-209ENST00000475664 MUSTN1Q8IVN3 82 aa13.68□□□□□ -0.22
MCF2L2-209ENST00000475664 C2orf91Q6ZV80 131 aa13.67□□□□□ -0.22
MCF2L2-209ENST00000475664 HIGD1BQ9P298 99 aa13.67□□□□□ -0.22
MCF2L2-209ENST00000475664 IGKV2-28A0A075B6P5 120 aa13.66□□□□□ -0.22
MCF2L2-209ENST00000475664 IGKV2D-28P01615 120 aa13.66□□□□□ -0.22
MCF2L2-209ENST00000475664 C1orf137Q5JT78 98 aa13.66□□□□□ -0.22
MCF2L2-209ENST00000475664 SRRM2Q9UQ35 2752 aaKnown RBP13.65□□□□□ -0.22
MCF2L2-209ENST00000475664 TRBV10-3A0A0K0K1G6 114 aa13.62□□□□□ -0.23
MCF2L2-209ENST00000475664 HNRNPA3P51991 378 aaKnown RBP13.62□□□□□ -0.23
MCF2L2-209ENST00000475664 HIST1H4GQ99525 98 aa13.62□□□□□ -0.23
MCF2L2-209ENST00000475664 PKHD1L1Q86WI1 4243 aa13.6□□□□□ -0.23
MCF2L2-209ENST00000475664 IGLV6-57P01721 117 aa13.6□□□□□ -0.23
MCF2L2-209ENST00000475664 DDTP30046 118 aa13.6□□□□□ -0.23
MCF2L2-209ENST00000475664 LINC00518Q8N0U6 118 aa13.6□□□□□ -0.23
MCF2L2-209ENST00000475664 UQCR10Q9UDW1 63 aa13.6□□□□□ -0.23
MCF2L2-209ENST00000475664 IGLV7-43P04211 117 aa13.59□□□□□ -0.23
MCF2L2-209ENST00000475664 S100A7L2Q5SY68 101 aa13.59□□□□□ -0.23
MCF2L2-209ENST00000475664 TMEM126AQ9H061 195 aa13.59□□□□□ -0.23
MCF2L2-209ENST00000475664 PRYO14603 147 aa13.58□□□□□ -0.24
MCF2L2-209ENST00000475664 BCE1O60756 84 aa13.58□□□□□ -0.24
MCF2L2-209ENST00000475664 REG3GQ6UW15 175 aa13.58□□□□□ -0.24
MCF2L2-209ENST00000475664 KCNQ1DNQ9H478 68 aa13.58□□□□□ -0.24
MCF2L2-209ENST00000475664 ABCA13Q86UQ4 5058 aa13.58□□□□□ -0.24
MCF2L2-209ENST00000475664 LINC00337Q8N6G1 96 aa13.57□□□□□ -0.24
MCF2L2-209ENST00000475664 A4D1N5 150 aa13.56□□□□□ -0.24
MCF2L2-209ENST00000475664 TAL2Q16559 108 aa13.55□□□□□ -0.24
MCF2L2-209ENST00000475664 INAFM2P0DMQ5 153 aa13.54□□□□□ -0.24
MCF2L2-209ENST00000475664 SPRR1AP35321 89 aa13.54□□□□□ -0.24
MCF2L2-209ENST00000475664 OR13C6PQ8NH95 151 aa13.54□□□□□ -0.24
MCF2L2-209ENST00000475664 C12orf57Q99622 126 aa13.54□□□□□ -0.24
MCF2L2-209ENST00000475664 PRO1933Q9H354 126 aa13.54□□□□□ -0.24
MCF2L2-209ENST00000475664 TRAV23DV6A0A075B6W5 121 aa13.51□□□□□ -0.25
MCF2L2-209ENST00000475664 SPINK6Q6UWN8 80 aa13.51□□□□□ -0.25
MCF2L2-209ENST00000475664 KRTAP13-1Q8IUC0 172 aa13.51□□□□□ -0.25
MCF2L2-209ENST00000475664 KRTAP4-16G5E9R7 235 aaPredicted RBP13.5□□□□□ -0.25
MCF2L2-209ENST00000475664 ZNF861PO60384 105 aa13.5□□□□□ -0.25
MCF2L2-209ENST00000475664 CEND1Q8N111 149 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms