RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 CKS1BP61024 79 aa8.52□□□□□ -1.05
FAM3A-218ENST00000475657 CAMK2N2Q96S95 79 aa8.52□□□□□ -1.05
FAM3A-218ENST00000475657 PKIGQ9Y2B9 76 aa8.52□□□□□ -1.05
FAM3A-218ENST00000475657 IGKV2D-26A0A0A0MRZ7 120 aa8.51□□□□□ -1.05
FAM3A-218ENST00000475657 NDUFA1O15239 70 aa8.51□□□□□ -1.05
FAM3A-218ENST00000475657 ZNF625Q96I27 306 aaPredicted RBP8.51□□□□□ -1.05
FAM3A-218ENST00000475657 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
FAM3A-218ENST00000475657 SYCNQ0VAF6 134 aa8.5□□□□□ -1.05
FAM3A-218ENST00000475657 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
FAM3A-218ENST00000475657 PAM16Q9Y3D7 125 aa8.5□□□□□ -1.05
FAM3A-218ENST00000475657 TRBV30A0A0K0K1B3 111 aa8.49□□□□□ -1.05
FAM3A-218ENST00000475657 MYMXA0A1B0GTQ4 84 aa8.49□□□□□ -1.05
FAM3A-218ENST00000475657 HERV-K104P63124 156 aa8.49□□□□□ -1.05
FAM3A-218ENST00000475657 S100A12P80511 92 aa8.49□□□□□ -1.05
FAM3A-218ENST00000475657 GAGE2BQ13066 116 aa8.49□□□□□ -1.05
FAM3A-218ENST00000475657 PRR4Q16378 134 aa8.49□□□□□ -1.05
FAM3A-218ENST00000475657 SPATA45Q537H7 98 aa8.49□□□□□ -1.05
FAM3A-218ENST00000475657 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
FAM3A-218ENST00000475657 FSIP2Q5CZC0 6907 aa8.48□□□□□ -1.05
FAM3A-218ENST00000475657 RNF151Q2KHN1 245 aa8.48□□□□□ -1.05
FAM3A-218ENST00000475657 UNQ6190/PRO20217Q6UXQ8 127 aa8.48□□□□□ -1.05
FAM3A-218ENST00000475657 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
FAM3A-218ENST00000475657 ZNF815PA8K554 130 aa8.46□□□□□ -1.06
FAM3A-218ENST00000475657 C10orf25Q5T742 122 aa8.46□□□□□ -1.06
FAM3A-218ENST00000475657 PCP2Q8IVA1 136 aa8.46□□□□□ -1.06
FAM3A-218ENST00000475657 TTTY13Q9BZ97 58 aa8.46□□□□□ -1.06
FAM3A-218ENST00000475657 C6orf48Q9UBA6 75 aa8.46□□□□□ -1.06
FAM3A-218ENST00000475657 A0A1W2PNN7 141 aa8.45□□□□□ -1.06
FAM3A-218ENST00000475657 LINC00587B1AMM8 73 aa8.45□□□□□ -1.06
FAM3A-218ENST00000475657 COX8AP10176 69 aa8.45□□□□□ -1.06
FAM3A-218ENST00000475657 DLEU1O43261 78 aa8.44□□□□□ -1.06
FAM3A-218ENST00000475657 PTTG1IPP53801 180 aa8.44□□□□□ -1.06
FAM3A-218ENST00000475657 BOD1L2Q8IYS8 172 aa8.44□□□□□ -1.06
FAM3A-218ENST00000475657 ERG28Q9UKR5 140 aa8.44□□□□□ -1.06
FAM3A-218ENST00000475657 IGLV1-50A0A075B6I6 118 aa8.43□□□□□ -1.06
FAM3A-218ENST00000475657 A0A0J9YXY3 114 aa8.43□□□□□ -1.06
FAM3A-218ENST00000475657 LOC107984640A0A0U1RRK4 108 aa8.43□□□□□ -1.06
FAM3A-218ENST00000475657 COX17Q14061 63 aa8.43□□□□□ -1.06
FAM3A-218ENST00000475657 MEIG1Q5JSS6 88 aa8.43□□□□□ -1.06
FAM3A-218ENST00000475657 DIRC1Q969H9 104 aa8.43□□□□□ -1.06
FAM3A-218ENST00000475657 C12orf57Q99622 126 aa8.43□□□□□ -1.06
FAM3A-218ENST00000475657 TLX1NBP0CAT3 122 aa8.42□□□□□ -1.06
FAM3A-218ENST00000475657 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
FAM3A-218ENST00000475657 SCGB1D4Q6XE38 83 aa8.42□□□□□ -1.06
FAM3A-218ENST00000475657 CRCT1Q9UGL9 99 aa8.42□□□□□ -1.06
FAM3A-218ENST00000475657 NDUFC2-KCTD14E9PQ53 114 aa8.41□□□□□ -1.06
FAM3A-218ENST00000475657 TIMM17BO60830 172 aa8.41□□□□□ -1.06
FAM3A-218ENST00000475657 RPL18AQ02543 176 aaKnown RBP8.41□□□□□ -1.06
FAM3A-218ENST00000475657 C9orf116Q5BN46 136 aaPredicted RBP8.41□□□□□ -1.06
FAM3A-218ENST00000475657 SLC25A34Q6PIV7 304 aa8.41□□□□□ -1.06
FAM3A-218ENST00000475657 LINC00518Q8N0U6 118 aa8.41□□□□□ -1.06
FAM3A-218ENST00000475657 C14orf144Q96I85 54 aa8.41□□□□□ -1.06
FAM3A-218ENST00000475657 SMIM13P0DJ93 91 aa8.39□□□□□ -1.07
FAM3A-218ENST00000475657 PFN2P35080 140 aa8.39□□□□□ -1.07
FAM3A-218ENST00000475657 C1orf137Q5JT78 98 aa8.39□□□□□ -1.07
FAM3A-218ENST00000475657 PHF5AQ7RTV0 110 aaKnown RBP8.39□□□□□ -1.07
FAM3A-218ENST00000475657 TMEM238C9JI98 176 aa8.38□□□□□ -1.07
FAM3A-218ENST00000475657 LINC00158P58513 81 aa8.38□□□□□ -1.07
FAM3A-218ENST00000475657 LITAFQ99732 161 aa8.38□□□□□ -1.07
FAM3A-218ENST00000475657 UQCR10Q9UDW1 63 aa8.38□□□□□ -1.07
FAM3A-218ENST00000475657 H0Y9J4 135 aa8.37□□□□□ -1.07
FAM3A-218ENST00000475657 IGLV7-43P04211 117 aa8.37□□□□□ -1.07
FAM3A-218ENST00000475657 TP73-AS1Q9UF72 201 aa8.37□□□□□ -1.07
FAM3A-218ENST00000475657 A0A0U1RRA0 63 aa8.36□□□□□ -1.07
FAM3A-218ENST00000475657 FAM168BA1KXE4 195 aa8.36□□□□□ -1.07
FAM3A-218ENST00000475657 RPL13AP40429 203 aaKnown RBP8.36□□□□□ -1.07
FAM3A-218ENST00000475657 Q6ZVH6 145 aa8.36□□□□□ -1.07
FAM3A-218ENST00000475657 MIR7-3HGQ8N6C7 128 aa8.36□□□□□ -1.07
FAM3A-218ENST00000475657 SPANXDQ9BXN6 97 aa8.36□□□□□ -1.07
FAM3A-218ENST00000475657 SPANXCQ9NY87 97 aa8.36□□□□□ -1.07
FAM3A-218ENST00000475657 HIGD1BQ9P298 99 aa8.36□□□□□ -1.07
FAM3A-218ENST00000475657 TSTD3H0UI37 97 aa8.35□□□□□ -1.07
FAM3A-218ENST00000475657 KRTAP1-4P0C5Y4 121 aa8.35□□□□□ -1.07
FAM3A-218ENST00000475657 C2orf91Q6ZV80 131 aa8.35□□□□□ -1.07
FAM3A-218ENST00000475657 SPANXB1Q9NS25 103 aaPredicted RBP8.35□□□□□ -1.07
FAM3A-218ENST00000475657 GAGE2EQ4V326 116 aa8.34□□□□□ -1.07
FAM3A-218ENST00000475657 ADAMTSL4-AS1Q5T5F5 129 aa8.34□□□□□ -1.07
FAM3A-218ENST00000475657 KRTAP11-1Q8IUC1 163 aa8.34□□□□□ -1.07
FAM3A-218ENST00000475657 PRO1933Q9H354 126 aa8.34□□□□□ -1.07
FAM3A-218ENST00000475657 SND1-IT1Q9HBX3 110 aa8.34□□□□□ -1.07
FAM3A-218ENST00000475657 GAGE2DQ9UEU5 116 aa8.34□□□□□ -1.07
FAM3A-218ENST00000475657 MUC17Q685J3 4493 aa8.33□□□□□ -1.08
FAM3A-218ENST00000475657 DAND5Q8N907 189 aa8.33□□□□□ -1.08
FAM3A-218ENST00000475657 COPS9Q8WXC6 57 aa8.33□□□□□ -1.08
FAM3A-218ENST00000475657 MIEN1Q9BRT3 115 aa8.33□□□□□ -1.08
FAM3A-218ENST00000475657 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
FAM3A-218ENST00000475657 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
FAM3A-218ENST00000475657 IFITM1P13164 125 aa8.32□□□□□ -1.08
FAM3A-218ENST00000475657 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
FAM3A-218ENST00000475657 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
FAM3A-218ENST00000475657 XAGE1AQ9HD64 81 aa8.32□□□□□ -1.08
FAM3A-218ENST00000475657 C9orf129Q5T035 196 aaKnown RBP8.31□□□□□ -1.08
FAM3A-218ENST00000475657 LINC00308Q8TCZ7 52 aa8.31□□□□□ -1.08
FAM3A-218ENST00000475657 TAL2Q16559 108 aa8.29□□□□□ -1.08
FAM3A-218ENST00000475657 SOSTDC1Q6X4U4 206 aa8.29□□□□□ -1.08
FAM3A-218ENST00000475657 HIST1H4GQ99525 98 aa8.29□□□□□ -1.08
FAM3A-218ENST00000475657 HSD52Q0P140 79 aa8.28□□□□□ -1.08
FAM3A-218ENST00000475657 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
FAM3A-218ENST00000475657 NDUFC2O95298 119 aa8.27□□□□□ -1.09
FAM3A-218ENST00000475657 NPC2P61916 151 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms