RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 OPRPNQ99935 248 aaPredicted RBP3.66□□□□□ -1.82
CPSF7-210ENST00000474684 SMIM2Q9BVW6 85 aa3.66□□□□□ -1.82
CPSF7-210ENST00000474684 GEMIN7Q9H840 131 aaKnown RBP3.66□□□□□ -1.82
CPSF7-210ENST00000474684 A0A1W2PNN7 141 aa3.65□□□□□ -1.83
CPSF7-210ENST00000474684 LINC01549A6NIU2 74 aa3.65□□□□□ -1.83
CPSF7-210ENST00000474684 D6R8Y8 96 aa3.65□□□□□ -1.83
CPSF7-210ENST00000474684 H3BMG7 143 aa3.65□□□□□ -1.83
CPSF7-210ENST00000474684 COX7A2LO14548 114 aa3.65□□□□□ -1.83
CPSF7-210ENST00000474684 SPAG11BQ08648 103 aa3.65□□□□□ -1.83
CPSF7-210ENST00000474684 SMAGPQ0VAQ4 97 aa3.65□□□□□ -1.83
CPSF7-210ENST00000474684 GAGE2BQ13066 116 aa3.65□□□□□ -1.83
CPSF7-210ENST00000474684 C2orf91Q6ZV80 131 aa3.65□□□□□ -1.83
CPSF7-210ENST00000474684 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
CPSF7-210ENST00000474684 FAM19A2Q8N3H0 131 aa3.65□□□□□ -1.83
CPSF7-210ENST00000474684 TRBV20-1A0A075B6N2 111 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 FAM168BA1KXE4 195 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 ZNF561-AS1K7EIQ3 104 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 VCYO14598 125 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 ATP5LO75964 103 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 TNFRSF6BO95407 300 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 MALP21145 153 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 RPL18AQ02543 176 aaKnown RBP3.64□□□□□ -1.83
CPSF7-210ENST00000474684 C10orf25Q5T742 122 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 Q6Q795 121 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 PHF5AQ7RTV0 110 aaKnown RBP3.64□□□□□ -1.83
CPSF7-210ENST00000474684 ATOH7Q8N100 152 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 LINC01600Q96MT4 127 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 CAMK2N2Q96S95 79 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 KIR2DL4Q99706 377 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 SPANXB1Q9NS25 103 aaPredicted RBP3.64□□□□□ -1.83
CPSF7-210ENST00000474684 ERG28Q9UKR5 140 aa3.64□□□□□ -1.83
CPSF7-210ENST00000474684 CSDC2Q9Y534 153 aaKnown RBP3.64□□□□□ -1.83
CPSF7-210ENST00000474684 LOC107984640A0A0U1RRK4 108 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 E9PLD3 99 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 APOMO95445 188 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 HBDP02042 147 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 CKS2P33552 79 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 RPL32P62910 135 aaKnown RBP3.63□□□□□ -1.83
CPSF7-210ENST00000474684 SRSF9Q13242 221 aaKnown RBP eCLIP3.63□□□□□ -1.83
CPSF7-210ENST00000474684 KIAA1644Q3SXP7 199 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 C9orf116Q5BN46 136 aaPredicted RBP3.63□□□□□ -1.83
CPSF7-210ENST00000474684 ZC2HC1BQ5TFG8 222 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 KRTAP7-1Q8IUC3 87 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 TIMM21Q9BVV7 248 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 TMEM126AQ9H061 195 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 C6orf48Q9UBA6 75 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 PSORS1C2Q9UIG4 136 aa3.63□□□□□ -1.83
CPSF7-210ENST00000474684 IGHV3OR16-9A0A0B4J2B5 98 aa3.62□□□□□ -1.83
CPSF7-210ENST00000474684 K7EMI3 77 aa3.62□□□□□ -1.83
CPSF7-210ENST00000474684 KRTAP10-8P60410 259 aa3.62□□□□□ -1.83
CPSF7-210ENST00000474684 SPINK6Q6UWN8 80 aa3.62□□□□□ -1.83
CPSF7-210ENST00000474684 Q6ZRP5 223 aa3.62□□□□□ -1.83
CPSF7-210ENST00000474684 LINC00173Q6ZV60 143 aa3.62□□□□□ -1.83
CPSF7-210ENST00000474684 PPDPFLQ8WWR9 84 aa3.62□□□□□ -1.83
CPSF7-210ENST00000474684 C2orf48Q96LS8 159 aa3.62□□□□□ -1.83
CPSF7-210ENST00000474684 C20orf78Q9BR46 151 aa3.62□□□□□ -1.83
CPSF7-210ENST00000474684 ANAPC13Q9BS18 74 aa3.62□□□□□ -1.83
CPSF7-210ENST00000474684 NXT2Q9NPJ8 142 aaKnown RBP3.62□□□□□ -1.83
CPSF7-210ENST00000474684 IGLV4-3A0A075B6K6 122 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 A0A1B0GWB2 263 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 LINC01546A6NGU7 62 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 PPP1R17O96001 155 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 SPINK8P0C7L1 97 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 MRPS36P82909 103 aaKnown RBP3.61□□□□□ -1.83
CPSF7-210ENST00000474684 UNQ6190/PRO20217Q6UXQ8 127 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 Q6ZVH6 145 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 FAM19A5Q7Z5A7 132 aaPredicted RBP3.61□□□□□ -1.83
CPSF7-210ENST00000474684 ORMDL3Q8N138 153 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 IFI27L1Q96BM0 104 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 MAP1LC3AQ9H492 121 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
CPSF7-210ENST00000474684 LINC00474Q9P2X8 69 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 PKIGQ9Y2B9 76 aa3.61□□□□□ -1.83
CPSF7-210ENST00000474684 NDUFA1O15239 70 aa3.6□□□□□ -1.83
CPSF7-210ENST00000474684 PLNP26678 52 aa3.6□□□□□ -1.83
CPSF7-210ENST00000474684 KIAA0087Q14695 138 aa3.6□□□□□ -1.83
CPSF7-210ENST00000474684 C1orf137Q5JT78 98 aa3.6□□□□□ -1.83
CPSF7-210ENST00000474684 LINC00242Q5T6M2 205 aa3.6□□□□□ -1.83
CPSF7-210ENST00000474684 C2orf82Q6UX34 121 aa3.6□□□□□ -1.83
CPSF7-210ENST00000474684 TEN1Q86WV5 123 aa3.6□□□□□ -1.83
CPSF7-210ENST00000474684 CEND1Q8N111 149 aa3.6□□□□□ -1.83
CPSF7-210ENST00000474684 PRELID3AQ96N28 172 aa3.6□□□□□ -1.83
CPSF7-210ENST00000474684 A0A087WZ39 114 aa3.59□□□□□ -1.83
CPSF7-210ENST00000474684 LOC389332A0A1B0GUA5 103 aa3.59□□□□□ -1.83
CPSF7-210ENST00000474684 DPM2O94777 84 aa3.59□□□□□ -1.83
CPSF7-210ENST00000474684 IFI27P40305 119 aaPredicted RBP3.59□□□□□ -1.83
CPSF7-210ENST00000474684 UBE2D1P51668 147 aa3.59□□□□□ -1.83
CPSF7-210ENST00000474684 GAGE2EQ4V326 116 aa3.59□□□□□ -1.83
CPSF7-210ENST00000474684 PAPPA-AS1Q5QFB9 102 aa3.59□□□□□ -1.83
CPSF7-210ENST00000474684 C9orf129Q5T035 196 aaKnown RBP3.59□□□□□ -1.83
CPSF7-210ENST00000474684 REG3GQ6UW15 175 aa3.59□□□□□ -1.83
CPSF7-210ENST00000474684 PRR26Q8N8Z3 221 aa3.59□□□□□ -1.83
CPSF7-210ENST00000474684 URB1-AS1Q96HZ7 61 aa3.59□□□□□ -1.83
CPSF7-210ENST00000474684 GAGE2DQ9UEU5 116 aa3.59□□□□□ -1.83
CPSF7-210ENST00000474684 FAM240AA0A1B0GVK7 77 aa3.58□□□□□ -1.84
CPSF7-210ENST00000474684 SNCGO76070 127 aa3.58□□□□□ -1.84
CPSF7-210ENST00000474684 IGKCP01834 107 aa3.58□□□□□ -1.84
CPSF7-210ENST00000474684 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
CPSF7-210ENST00000474684 KRTAP1-4P0C5Y4 121 aa3.58□□□□□ -1.84
CPSF7-210ENST00000474684 TLX1NBP0CAT3 122 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms