RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 LINC00158P58513 81 aa11.63□□□□□ -0.55
CCDC171-206ENST00000474193 TSPEAR-AS2P59090 65 aa11.63□□□□□ -0.55
CCDC171-206ENST00000474193 A0A1W2PNN7 141 aa11.6□□□□□ -0.55
CCDC171-206ENST00000474193 A0A0U1RRA0 63 aa11.59□□□□□ -0.55
CCDC171-206ENST00000474193 REG3GQ6UW15 175 aa11.59□□□□□ -0.55
CCDC171-206ENST00000474193 SPINK6Q6UWN8 80 aa11.59□□□□□ -0.55
CCDC171-206ENST00000474193 XAGE1AQ9HD64 81 aa11.59□□□□□ -0.55
CCDC171-206ENST00000474193 ZNF815PA8K554 130 aa11.58□□□□□ -0.56
CCDC171-206ENST00000474193 SMIM13P0DJ93 91 aa11.58□□□□□ -0.56
CCDC171-206ENST00000474193 ANKRD39Q53RE8 183 aa11.58□□□□□ -0.56
CCDC171-206ENST00000474193 LRP1Q07954 4544 aaKnown RBP11.58□□□□□ -0.56
CCDC171-206ENST00000474193 IGKV2D-26A0A0A0MRZ7 120 aa11.57□□□□□ -0.56
CCDC171-206ENST00000474193 JOSD1Q15040 202 aaPredicted RBP11.56□□□□□ -0.56
CCDC171-206ENST00000474193 C9orf129Q5T035 196 aaKnown RBP11.56□□□□□ -0.56
CCDC171-206ENST00000474193 FAM19A5Q7Z5A7 132 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-206ENST00000474193 PKHD1L1Q86WI1 4243 aa11.55□□□□□ -0.56
CCDC171-206ENST00000474193 FAT3Q8TDW7 4589 aa11.54□□□□□ -0.56
CCDC171-206ENST00000474193 A0A0J9YXY3 114 aa11.54□□□□□ -0.56
CCDC171-206ENST00000474193 SND1-IT1Q9HBX3 110 aa11.54□□□□□ -0.56
CCDC171-206ENST00000474193 FAM168BA1KXE4 195 aa11.53□□□□□ -0.56
CCDC171-206ENST00000474193 SCGB1D4Q6XE38 83 aa11.53□□□□□ -0.56
CCDC171-206ENST00000474193 PHF5AQ7RTV0 110 aaKnown RBP11.53□□□□□ -0.56
CCDC171-206ENST00000474193 MIR7-3HGQ8N6C7 128 aa11.53□□□□□ -0.56
CCDC171-206ENST00000474193 PSORS1C2Q9UIG4 136 aa11.52□□□□□ -0.57
CCDC171-206ENST00000474193 RPL24P83731 157 aaKnown RBP11.51□□□□□ -0.57
CCDC171-206ENST00000474193 C1orf137Q5JT78 98 aa11.51□□□□□ -0.57
CCDC171-206ENST00000474193 LINC01600Q96MT4 127 aa11.51□□□□□ -0.57
CCDC171-206ENST00000474193 VAMP8Q9BV40 100 aa11.51□□□□□ -0.57
CCDC171-206ENST00000474193 TTTY13Q9BZ97 58 aa11.51□□□□□ -0.57
CCDC171-206ENST00000474193 PLA2G2DQ9UNK4 145 aa11.51□□□□□ -0.57
CCDC171-206ENST00000474193 M0QXV9 152 aa11.5□□□□□ -0.57
CCDC171-206ENST00000474193 SRSF9Q13242 221 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC171-206ENST00000474193 PCP2Q8IVA1 136 aa11.5□□□□□ -0.57
CCDC171-206ENST00000474193 MIEN1Q9BRT3 115 aa11.5□□□□□ -0.57
CCDC171-206ENST00000474193 UBE2BP63146 152 aa11.49□□□□□ -0.57
CCDC171-206ENST00000474193 LBHQ53QV2 105 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-206ENST00000474193 NKAPP1Q8N9T2 125 aa11.49□□□□□ -0.57
CCDC171-206ENST00000474193 TIMM17BO60830 172 aa11.48□□□□□ -0.57
CCDC171-206ENST00000474193 MT1HL1P0DM35 61 aa11.48□□□□□ -0.57
CCDC171-206ENST00000474193 DAND5Q8N907 189 aa11.48□□□□□ -0.57
CCDC171-206ENST00000474193 PAM16Q9Y3D7 125 aa11.48□□□□□ -0.57
CCDC171-206ENST00000474193 TMEM238C9JI98 176 aa11.47□□□□□ -0.57
CCDC171-206ENST00000474193 SPATA45Q537H7 98 aa11.47□□□□□ -0.57
CCDC171-206ENST00000474193 C22orf24Q9Y442 160 aa11.47□□□□□ -0.57
CCDC171-206ENST00000474193 PYY3Q5JQD4 70 aa11.46□□□□□ -0.57
CCDC171-206ENST00000474193 BOD1L2Q8IYS8 172 aa11.46□□□□□ -0.57
CCDC171-206ENST00000474193 TP73-AS1Q9UF72 201 aa11.45□□□□□ -0.58
CCDC171-206ENST00000474193 ADAMTSL4-AS1Q5T5F5 129 aa11.44□□□□□ -0.58
CCDC171-206ENST00000474193 MRPL55Q7Z7F7 128 aaKnown RBP11.44□□□□□ -0.58
CCDC171-206ENST00000474193 COPS9Q8WXC6 57 aa11.44□□□□□ -0.58
CCDC171-206ENST00000474193 DIRC1Q969H9 104 aa11.44□□□□□ -0.58
CCDC171-206ENST00000474193 IGLV5-37A0A075B6J1 123 aa11.43□□□□□ -0.58
CCDC171-206ENST00000474193 IGLV7-43P04211 117 aa11.43□□□□□ -0.58
CCDC171-206ENST00000474193 NPC2P61916 151 aa11.43□□□□□ -0.58
CCDC171-206ENST00000474193 KRTAP7-1Q8IUC3 87 aa11.43□□□□□ -0.58
CCDC171-206ENST00000474193 COX8AP10176 69 aa11.42□□□□□ -0.58
CCDC171-206ENST00000474193 S100A12P80511 92 aa11.42□□□□□ -0.58
CCDC171-206ENST00000474193 LOC107984156A0A0G2JMH3 177 aa11.41□□□□□ -0.58
CCDC171-206ENST00000474193 VPREB1P12018 145 aa11.41□□□□□ -0.58
CCDC171-206ENST00000474193 Q6ZVH6 145 aa11.41□□□□□ -0.58
CCDC171-206ENST00000474193 ARL17AQ8IVW1 177 aa11.41□□□□□ -0.58
CCDC171-206ENST00000474193 LITAFQ99732 161 aa11.41□□□□□ -0.58
CCDC171-206ENST00000474193 GAGE10A6NGK3 116 aa11.39□□□□□ -0.59
CCDC171-206ENST00000474193 LINC00308Q8TCZ7 52 aa11.39□□□□□ -0.59
CCDC171-206ENST00000474193 C14orf144Q96I85 54 aa11.39□□□□□ -0.59
CCDC171-206ENST00000474193 SPANXDQ9BXN6 97 aa11.39□□□□□ -0.59
CCDC171-206ENST00000474193 SPANXCQ9NY87 97 aa11.39□□□□□ -0.59
CCDC171-206ENST00000474193 M0R378 163 aa11.38□□□□□ -0.59
CCDC171-206ENST00000474193 DLEU1O43261 78 aa11.38□□□□□ -0.59
CCDC171-206ENST00000474193 IFITM1P13164 125 aa11.38□□□□□ -0.59
CCDC171-206ENST00000474193 SLC25A34Q6PIV7 304 aa11.38□□□□□ -0.59
CCDC171-206ENST00000474193 LINC00167Q96N53 147 aa11.38□□□□□ -0.59
CCDC171-206ENST00000474193 KRTAP10-8P60410 259 aa11.37□□□□□ -0.59
CCDC171-206ENST00000474193 RPL37AP8A6NKH3 93 aa11.36□□□□□ -0.59
CCDC171-206ENST00000474193 NCR3O14931 201 aa11.36□□□□□ -0.59
CCDC171-206ENST00000474193 NDUFC2O95298 119 aa11.36□□□□□ -0.59
CCDC171-206ENST00000474193 SPANXB1Q9NS25 103 aaPredicted RBP11.36□□□□□ -0.59
CCDC171-206ENST00000474193 SOSTDC1Q6X4U4 206 aa11.35□□□□□ -0.59
CCDC171-206ENST00000474193 Q8NDZ9 215 aa11.35□□□□□ -0.59
CCDC171-206ENST00000474193 H0Y9J4 135 aa11.34□□□□□ -0.59
CCDC171-206ENST00000474193 IGKV2-28A0A075B6P5 120 aa11.33□□□□□ -0.6
CCDC171-206ENST00000474193 TRBV10-2A0A0K0K1G8 114 aa11.33□□□□□ -0.6
CCDC171-206ENST00000474193 IGKV2D-28P01615 120 aa11.33□□□□□ -0.6
CCDC171-206ENST00000474193 KRTAP11-1Q8IUC1 163 aa11.33□□□□□ -0.6
CCDC171-206ENST00000474193 S100A7L2Q5SY68 101 aa11.32□□□□□ -0.6
CCDC171-206ENST00000474193 MUSTN1Q8IVN3 82 aa11.32□□□□□ -0.6
CCDC171-206ENST00000474193 HIST1H4GQ99525 98 aa11.32□□□□□ -0.6
CCDC171-206ENST00000474193 IGLV1-50A0A075B6I6 118 aa11.31□□□□□ -0.6
CCDC171-206ENST00000474193 EIF4EBP3O60516 100 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-206ENST00000474193 SMIM6P0DI80 62 aa11.31□□□□□ -0.6
CCDC171-206ENST00000474193 LINC00518Q8N0U6 118 aa11.31□□□□□ -0.6
CCDC171-206ENST00000474193 PPDPFQ9H3Y8 114 aa11.31□□□□□ -0.6
CCDC171-206ENST00000474193 LOC105371267A0A1B0GV96 52 aa11.3□□□□□ -0.6
CCDC171-206ENST00000474193 DDTP30046 118 aa11.29□□□□□ -0.6
CCDC171-206ENST00000474193 HIGD1BQ9P298 99 aa11.29□□□□□ -0.6
CCDC171-206ENST00000474193 ZNF861PO60384 105 aa11.28□□□□□ -0.6
CCDC171-206ENST00000474193 OR13C6PQ8NH95 151 aa11.28□□□□□ -0.6
CCDC171-206ENST00000474193 CBY1Q9Y3M2 126 aa11.28□□□□□ -0.6
CCDC171-206ENST00000474193 RPL28P46779 137 aaKnown RBP11.27□□□□□ -0.61
CCDC171-206ENST00000474193 TRBV10-3A0A0K0K1G6 114 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms