RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 COX8AP10176 69 aa4.87□□□□□ -1.63
CCDC93-207ENST00000474006 LINC00158P58513 81 aa4.87□□□□□ -1.63
CCDC93-207ENST00000474006 BOD1L2Q8IYS8 172 aa4.87□□□□□ -1.63
CCDC93-207ENST00000474006 ERG28Q9UKR5 140 aa4.87□□□□□ -1.63
CCDC93-207ENST00000474006 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 LOC107984640A0A0U1RRK4 108 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 LINC00587B1AMM8 73 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 TLX1NBP0CAT3 122 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 SMIM13P0DJ93 91 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 GAGE2BQ13066 116 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 CIRBPQ14011 172 aaKnown RBP4.86□□□□□ -1.63
CCDC93-207ENST00000474006 COX17Q14061 63 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 MEIG1Q5JSS6 88 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 Q6ZRP5 223 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 C12orf57Q99622 126 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 DNAH8Q96JB1 4490 aa4.86□□□□□ -1.63
CCDC93-207ENST00000474006 NDUFC2-KCTD14E9PQ53 114 aa4.85□□□□□ -1.63
CCDC93-207ENST00000474006 DLEU1O43261 78 aa4.85□□□□□ -1.63
CCDC93-207ENST00000474006 KRTAP10-1P60331 282 aa4.85□□□□□ -1.63
CCDC93-207ENST00000474006 GAGE2EQ4V326 116 aa4.85□□□□□ -1.63
CCDC93-207ENST00000474006 SLC25A34Q6PIV7 304 aa4.85□□□□□ -1.63
CCDC93-207ENST00000474006 SCGB1D4Q6XE38 83 aa4.85□□□□□ -1.63
CCDC93-207ENST00000474006 LINC00518Q8N0U6 118 aa4.85□□□□□ -1.63
CCDC93-207ENST00000474006 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
CCDC93-207ENST00000474006 GAGE2DQ9UEU5 116 aa4.85□□□□□ -1.63
CCDC93-207ENST00000474006 C16orf90A8MZG2 172 aa4.84□□□□□ -1.63
CCDC93-207ENST00000474006 TIMM17BO60830 172 aa4.84□□□□□ -1.63
CCDC93-207ENST00000474006 RPL18AQ02543 176 aaKnown RBP4.84□□□□□ -1.63
CCDC93-207ENST00000474006 DPH3Q96FX2 82 aa4.84□□□□□ -1.63
CCDC93-207ENST00000474006 LITAFQ99732 161 aa4.84□□□□□ -1.63
CCDC93-207ENST00000474006 TP73-AS1Q9UF72 201 aa4.84□□□□□ -1.63
CCDC93-207ENST00000474006 DYNC1H1Q14204 4646 aaKnown RBP4.83□□□□□ -1.64
CCDC93-207ENST00000474006 A0A096LNI7 61 aa4.83□□□□□ -1.64
CCDC93-207ENST00000474006 IGKV2-24A0A0C4DH68 120 aa4.83□□□□□ -1.64
CCDC93-207ENST00000474006 PANO1I0J062 215 aa4.83□□□□□ -1.64
CCDC93-207ENST00000474006 CHTF8P0CG12 524 aa4.83□□□□□ -1.64
CCDC93-207ENST00000474006 MIR7-3HGQ8N6C7 128 aa4.83□□□□□ -1.64
CCDC93-207ENST00000474006 DAND5Q8N907 189 aa4.83□□□□□ -1.64
CCDC93-207ENST00000474006 PRO1933Q9H354 126 aa4.83□□□□□ -1.64
CCDC93-207ENST00000474006 SND1-IT1Q9HBX3 110 aa4.83□□□□□ -1.64
CCDC93-207ENST00000474006 XAGE1AQ9HD64 81 aa4.83□□□□□ -1.64
CCDC93-207ENST00000474006 PKIGQ9Y2B9 76 aa4.83□□□□□ -1.64
CCDC93-207ENST00000474006 LRP1BQ9NZR2 4599 aa4.82□□□□□ -1.64
CCDC93-207ENST00000474006 C9orf129Q5T035 196 aaKnown RBP4.82□□□□□ -1.64
CCDC93-207ENST00000474006 LINC00474Q9P2X8 69 aa4.82□□□□□ -1.64
CCDC93-207ENST00000474006 UQCR10Q9UDW1 63 aa4.82□□□□□ -1.64
CCDC93-207ENST00000474006 A0A1W2PNN7 141 aa4.81□□□□□ -1.64
CCDC93-207ENST00000474006 TMEM238C9JI98 176 aa4.81□□□□□ -1.64
CCDC93-207ENST00000474006 NPC2P61916 151 aa4.81□□□□□ -1.64
CCDC93-207ENST00000474006 SRSF9Q13242 221 aaKnown RBP eCLIP4.81□□□□□ -1.64
CCDC93-207ENST00000474006 C2orf91Q6ZV80 131 aa4.81□□□□□ -1.64
CCDC93-207ENST00000474006 MIEN1Q9BRT3 115 aa4.81□□□□□ -1.64
CCDC93-207ENST00000474006 SPANXDQ9BXN6 97 aa4.81□□□□□ -1.64
CCDC93-207ENST00000474006 SPANXCQ9NY87 97 aa4.81□□□□□ -1.64
CCDC93-207ENST00000474006 PKHD1P08F94 4074 aa4.81□□□□□ -1.64
CCDC93-207ENST00000474006 LOC107984156A0A0G2JMH3 177 aa4.8□□□□□ -1.64
CCDC93-207ENST00000474006 FAM168BA1KXE4 195 aa4.8□□□□□ -1.64
CCDC93-207ENST00000474006 PRR3P79522 188 aaKnown RBP4.8□□□□□ -1.64
CCDC93-207ENST00000474006 SOSTDC1Q6X4U4 206 aa4.8□□□□□ -1.64
CCDC93-207ENST00000474006 Q6ZVH6 145 aa4.8□□□□□ -1.64
CCDC93-207ENST00000474006 MUSTN1Q8IVN3 82 aa4.8□□□□□ -1.64
CCDC93-207ENST00000474006 ARL17AQ8IVW1 177 aa4.8□□□□□ -1.64
CCDC93-207ENST00000474006 LINC00308Q8TCZ7 52 aa4.8□□□□□ -1.64
CCDC93-207ENST00000474006 SPACA4Q8TDM5 124 aa4.8□□□□□ -1.64
CCDC93-207ENST00000474006 HIST1H4GQ99525 98 aa4.8□□□□□ -1.64
CCDC93-207ENST00000474006 SPANXB1Q9NS25 103 aaPredicted RBP4.8□□□□□ -1.64
CCDC93-207ENST00000474006 HIGD1BQ9P298 99 aa4.8□□□□□ -1.64
CCDC93-207ENST00000474006 A0A087WYN8 130 aa4.79□□□□□ -1.64
CCDC93-207ENST00000474006 IFITM1P13164 125 aa4.79□□□□□ -1.64
CCDC93-207ENST00000474006 Q6ZSA8 131 aa4.79□□□□□ -1.64
CCDC93-207ENST00000474006 KRTAP7-1Q8IUC3 87 aa4.79□□□□□ -1.64
CCDC93-207ENST00000474006 EPM2AB3EWF7 344 aa4.78□□□□□ -1.64
CCDC93-207ENST00000474006 TSTD3H0UI37 97 aa4.78□□□□□ -1.64
CCDC93-207ENST00000474006 RPL24P83731 157 aaKnown RBP4.78□□□□□ -1.64
CCDC93-207ENST00000474006 FAM19A5Q7Z5A7 132 aaPredicted RBP4.78□□□□□ -1.64
CCDC93-207ENST00000474006 Q8NDZ9 215 aa4.78□□□□□ -1.64
CCDC93-207ENST00000474006 COPS9Q8WXC6 57 aa4.78□□□□□ -1.64
CCDC93-207ENST00000474006 PLAC8Q9NZF1 115 aa4.78□□□□□ -1.64
CCDC93-207ENST00000474006 C22orf24Q9Y442 160 aa4.78□□□□□ -1.64
CCDC93-207ENST00000474006 EPPK1P58107 5090 aaKnown RBP4.78□□□□□ -1.64
CCDC93-207ENST00000474006 HNRNPA3P51991 378 aaKnown RBP4.77□□□□□ -1.65
CCDC93-207ENST00000474006 XGP55808 180 aa4.77□□□□□ -1.65
CCDC93-207ENST00000474006 HAMPP81172 84 aa4.77□□□□□ -1.65
CCDC93-207ENST00000474006 CIRBP-AS1Q8TBR5 109 aa4.77□□□□□ -1.65
CCDC93-207ENST00000474006 IGLV5-37A0A075B6J1 123 aa4.76□□□□□ -1.65
CCDC93-207ENST00000474006 NDUFC2O95298 119 aa4.76□□□□□ -1.65
CCDC93-207ENST00000474006 VPREB1P12018 145 aa4.76□□□□□ -1.65
CCDC93-207ENST00000474006 CTAG1AP78358 180 aa4.76□□□□□ -1.65
CCDC93-207ENST00000474006 TAL2Q16559 108 aa4.76□□□□□ -1.65
CCDC93-207ENST00000474006 SCXQ7RTU7 201 aa4.76□□□□□ -1.65
CCDC93-207ENST00000474006 PPDPFQ9H3Y8 114 aa4.76□□□□□ -1.65
CCDC93-207ENST00000474006 APOBP04114 4563 aaKnown RBP4.75□□□□□ -1.65
CCDC93-207ENST00000474006 A4D1N5 150 aa4.75□□□□□ -1.65
CCDC93-207ENST00000474006 M0R378 163 aa4.75□□□□□ -1.65
CCDC93-207ENST00000474006 LBHQ53QV2 105 aaPredicted RBP4.75□□□□□ -1.65
CCDC93-207ENST00000474006 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
CCDC93-207ENST00000474006 PHF5AQ7RTV0 110 aaKnown RBP4.75□□□□□ -1.65
CCDC93-207ENST00000474006 CEND1Q8N111 149 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms