RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 PHF5AQ7RTV0 110 aaKnown RBP11.85□□□□□ -0.51
CTDSP1-207ENST00000473420 MIR7-3HGQ8N6C7 128 aa11.85□□□□□ -0.51
CTDSP1-207ENST00000473420 TP73-AS1Q9UF72 201 aa11.85□□□□□ -0.51
CTDSP1-207ENST00000473420 FAT1Q14517 4588 aa11.84□□□□□ -0.51
CTDSP1-207ENST00000473420 ZNF815PA8K554 130 aa11.84□□□□□ -0.51
CTDSP1-207ENST00000473420 KRTAP10-4P60372 401 aaPredicted RBP11.83□□□□□ -0.52
CTDSP1-207ENST00000473420 KRTAP4-5Q9BYR2 181 aa11.83□□□□□ -0.52
CTDSP1-207ENST00000473420 C22orf24Q9Y442 160 aa11.83□□□□□ -0.52
CTDSP1-207ENST00000473420 RPL24P83731 157 aaKnown RBP11.82□□□□□ -0.52
CTDSP1-207ENST00000473420 TTTY13Q9BZ97 58 aa11.82□□□□□ -0.52
CTDSP1-207ENST00000473420 TIMM17BO60830 172 aa11.81□□□□□ -0.52
CTDSP1-207ENST00000473420 JOSD1Q15040 202 aaPredicted RBP11.81□□□□□ -0.52
CTDSP1-207ENST00000473420 LBHQ53QV2 105 aaPredicted RBP11.81□□□□□ -0.52
CTDSP1-207ENST00000473420 LOC107984156A0A0G2JMH3 177 aa11.8□□□□□ -0.52
CTDSP1-207ENST00000473420 VPREB1P12018 145 aa11.8□□□□□ -0.52
CTDSP1-207ENST00000473420 MRPL55Q7Z7F7 128 aaKnown RBP11.8□□□□□ -0.52
CTDSP1-207ENST00000473420 ARL17AQ8IVW1 177 aa11.8□□□□□ -0.52
CTDSP1-207ENST00000473420 NKAPP1Q8N9T2 125 aa11.8□□□□□ -0.52
CTDSP1-207ENST00000473420 VPS13BQ7Z7G8 4022 aa11.8□□□□□ -0.52
CTDSP1-207ENST00000473420 PRR3P79522 188 aaKnown RBP11.79□□□□□ -0.52
CTDSP1-207ENST00000473420 UBE2BP63146 152 aa11.78□□□□□ -0.52
CTDSP1-207ENST00000473420 DAND5Q8N907 189 aa11.78□□□□□ -0.52
CTDSP1-207ENST00000473420 SRRM2Q9UQ35 2752 aaKnown RBP11.77□□□□□ -0.53
CTDSP1-207ENST00000473420 PCP2Q8IVA1 136 aa11.77□□□□□ -0.53
CTDSP1-207ENST00000473420 LITAFQ99732 161 aa11.77□□□□□ -0.53
CTDSP1-207ENST00000473420 ADAMTSL4-AS1Q5T5F5 129 aa11.76□□□□□ -0.53
CTDSP1-207ENST00000473420 SCGB1D4Q6XE38 83 aa11.76□□□□□ -0.53
CTDSP1-207ENST00000473420 BOD1L2Q8IYS8 172 aa11.76□□□□□ -0.53
CTDSP1-207ENST00000473420 PSORS1C2Q9UIG4 136 aa11.76□□□□□ -0.53
CTDSP1-207ENST00000473420 Q8NDZ9 215 aa11.75□□□□□ -0.53
CTDSP1-207ENST00000473420 LINC00167Q96N53 147 aa11.75□□□□□ -0.53
CTDSP1-207ENST00000473420 MIEN1Q9BRT3 115 aa11.75□□□□□ -0.53
CTDSP1-207ENST00000473420 TMEM238C9JI98 176 aa11.74□□□□□ -0.53
CTDSP1-207ENST00000473420 KRTAP11-1Q8IUC1 163 aa11.74□□□□□ -0.53
CTDSP1-207ENST00000473420 INAFM2P0DMQ5 153 aa11.72□□□□□ -0.53
CTDSP1-207ENST00000473420 SPANXDQ9BXN6 97 aa11.72□□□□□ -0.53
CTDSP1-207ENST00000473420 SPANXCQ9NY87 97 aa11.72□□□□□ -0.53
CTDSP1-207ENST00000473420 M0R378 163 aa11.71□□□□□ -0.53
CTDSP1-207ENST00000473420 NDUFC2O95298 119 aa11.71□□□□□ -0.53
CTDSP1-207ENST00000473420 PYY3Q5JQD4 70 aa11.71□□□□□ -0.53
CTDSP1-207ENST00000473420 VAMP8Q9BV40 100 aa11.71□□□□□ -0.53
CTDSP1-207ENST00000473420 ABCA13Q86UQ4 5058 aa11.71□□□□□ -0.54
CTDSP1-207ENST00000473420 GAGE10A6NGK3 116 aa11.7□□□□□ -0.54
CTDSP1-207ENST00000473420 C1orf137Q5JT78 98 aa11.7□□□□□ -0.54
CTDSP1-207ENST00000473420 SOSTDC1Q6X4U4 206 aa11.7□□□□□ -0.54
CTDSP1-207ENST00000473420 Q6ZVH6 145 aa11.7□□□□□ -0.54
CTDSP1-207ENST00000473420 LINC00308Q8TCZ7 52 aa11.7□□□□□ -0.54
CTDSP1-207ENST00000473420 IGLV1-50A0A075B6I6 118 aa11.69□□□□□ -0.54
CTDSP1-207ENST00000473420 TRBV10-2A0A0K0K1G8 114 aa11.68□□□□□ -0.54
CTDSP1-207ENST00000473420 RPL37AP8A6NKH3 93 aa11.68□□□□□ -0.54
CTDSP1-207ENST00000473420 COX8AP10176 69 aa11.68□□□□□ -0.54
CTDSP1-207ENST00000473420 NPC2P61916 151 aa11.68□□□□□ -0.54
CTDSP1-207ENST00000473420 SPATA45Q537H7 98 aa11.68□□□□□ -0.54
CTDSP1-207ENST00000473420 COPS9Q8WXC6 57 aa11.68□□□□□ -0.54
CTDSP1-207ENST00000473420 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
CTDSP1-207ENST00000473420 SPANXB1Q9NS25 103 aaPredicted RBP11.68□□□□□ -0.54
CTDSP1-207ENST00000473420 PAM16Q9Y3D7 125 aa11.68□□□□□ -0.54
CTDSP1-207ENST00000473420 NCR3O14931 201 aa11.67□□□□□ -0.54
CTDSP1-207ENST00000473420 EIF4EBP3O60516 100 aaPredicted RBP11.67□□□□□ -0.54
CTDSP1-207ENST00000473420 IFITM1P13164 125 aa11.67□□□□□ -0.54
CTDSP1-207ENST00000473420 HNRNPA3P51991 378 aaKnown RBP11.67□□□□□ -0.54
CTDSP1-207ENST00000473420 IGKV2-28A0A075B6P5 120 aa11.66□□□□□ -0.54
CTDSP1-207ENST00000473420 DLEU1O43261 78 aa11.66□□□□□ -0.54
CTDSP1-207ENST00000473420 IGKV2D-28P01615 120 aa11.66□□□□□ -0.54
CTDSP1-207ENST00000473420 IGLV7-43P04211 117 aa11.65□□□□□ -0.54
CTDSP1-207ENST00000473420 SRSF9Q13242 221 aaKnown RBP eCLIP11.64□□□□□ -0.55
CTDSP1-207ENST00000473420 SPINK6Q6UWN8 80 aa11.64□□□□□ -0.55
CTDSP1-207ENST00000473420 BCE1O60756 84 aa11.63□□□□□ -0.55
CTDSP1-207ENST00000473420 REG3GQ6UW15 175 aa11.61□□□□□ -0.55
CTDSP1-207ENST00000473420 C14orf144Q96I85 54 aa11.61□□□□□ -0.55
CTDSP1-207ENST00000473420 TMEM126AQ9H061 195 aa11.61□□□□□ -0.55
CTDSP1-207ENST00000473420 PKHD1L1Q86WI1 4243 aa11.6□□□□□ -0.55
CTDSP1-207ENST00000473420 PCLOQ9Y6V0 5065 aa11.6□□□□□ -0.55
CTDSP1-207ENST00000473420 TRBV10-3A0A0K0K1G6 114 aa11.6□□□□□ -0.55
CTDSP1-207ENST00000473420 PRYO14603 147 aa11.6□□□□□ -0.55
CTDSP1-207ENST00000473420 SLC25A34Q6PIV7 304 aa11.6□□□□□ -0.55
CTDSP1-207ENST00000473420 KCNQ1DNQ9H478 68 aa11.6□□□□□ -0.55
CTDSP1-207ENST00000473420 DDTP30046 118 aa11.59□□□□□ -0.55
CTDSP1-207ENST00000473420 MUSTN1Q8IVN3 82 aa11.59□□□□□ -0.55
CTDSP1-207ENST00000473420 LINC00518Q8N0U6 118 aa11.59□□□□□ -0.55
CTDSP1-207ENST00000473420 IGLV6-57P01721 117 aa11.58□□□□□ -0.56
CTDSP1-207ENST00000473420 S100A12P80511 92 aa11.58□□□□□ -0.56
CTDSP1-207ENST00000473420 S100A7L2Q5SY68 101 aa11.58□□□□□ -0.56
CTDSP1-207ENST00000473420 ZNF861PO60384 105 aa11.57□□□□□ -0.56
CTDSP1-207ENST00000473420 HIGD1BQ9P298 99 aa11.57□□□□□ -0.56
CTDSP1-207ENST00000473420 RPL28P46779 137 aaKnown RBP11.56□□□□□ -0.56
CTDSP1-207ENST00000473420 DIRC1Q969H9 104 aa11.56□□□□□ -0.56
CTDSP1-207ENST00000473420 FLG2Q5D862 2391 aaPredicted RBP11.55□□□□□ -0.56
CTDSP1-207ENST00000473420 SPRR1AP35321 89 aa11.55□□□□□ -0.56
CTDSP1-207ENST00000473420 CBY1Q9Y3M2 126 aa11.55□□□□□ -0.56
CTDSP1-207ENST00000473420 H0Y9J4 135 aa11.54□□□□□ -0.56
CTDSP1-207ENST00000473420 UBE2AP49459 152 aa11.54□□□□□ -0.56
CTDSP1-207ENST00000473420 KRTAP13-1Q8IUC0 172 aa11.54□□□□□ -0.56
CTDSP1-207ENST00000473420 LINC00337Q8N6G1 96 aa11.54□□□□□ -0.56
CTDSP1-207ENST00000473420 FAM19A1Q7Z5A9 133 aa11.53□□□□□ -0.56
CTDSP1-207ENST00000473420 HIST1H4GQ99525 98 aa11.53□□□□□ -0.56
CTDSP1-207ENST00000473420 OXTP01178 125 aa11.52□□□□□ -0.57
CTDSP1-207ENST00000473420 C2orf91Q6ZV80 131 aa11.52□□□□□ -0.57
CTDSP1-207ENST00000473420 TRAV23DV6A0A075B6W5 121 aa11.51□□□□□ -0.57
CTDSP1-207ENST00000473420 SMIM6P0DI80 62 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms