RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 C3orf79P0CE67 100 aa8.81□□□□□ -1
BRCA1-211ENST00000472490 LGALS3P17931 250 aaKnown RBP8.81□□□□□ -1
BRCA1-211ENST00000472490 NMUP48645 174 aa8.81□□□□□ -1
BRCA1-211ENST00000472490 AKR1D1P51857 326 aa8.81□□□□□ -1
BRCA1-211ENST00000472490 KRTDAPP60985 99 aa8.81□□□□□ -1
BRCA1-211ENST00000472490 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
BRCA1-211ENST00000472490 SERTAD4-AS1Q5TG53 156 aa8.81□□□□□ -1
BRCA1-211ENST00000472490 KRTAP7-1Q8IUC3 87 aa8.81□□□□□ -1
BRCA1-211ENST00000472490 SND1-IT1Q9HBX3 110 aa8.81□□□□□ -1
BRCA1-211ENST00000472490 PSORS1C2Q9UIG4 136 aa8.81□□□□□ -1
BRCA1-211ENST00000472490 S100A2P29034 98 aa8.8□□□□□ -1
BRCA1-211ENST00000472490 RPL24P83731 157 aaKnown RBP8.8□□□□□ -1
BRCA1-211ENST00000472490 MRPL55Q7Z7F7 128 aaKnown RBP8.8□□□□□ -1
BRCA1-211ENST00000472490 NKAPP1Q8N9T2 125 aa8.8□□□□□ -1
BRCA1-211ENST00000472490 ABCA13Q86UQ4 5058 aa8.79□□□□□ -1
BRCA1-211ENST00000472490 E9PLD3 99 aa8.79□□□□□ -1
BRCA1-211ENST00000472490 C1orf137Q5JT78 98 aa8.79□□□□□ -1
BRCA1-211ENST00000472490 SPINK6Q6UWN8 80 aa8.79□□□□□ -1
BRCA1-211ENST00000472490 OXTP01178 125 aa8.78□□□□□ -1
BRCA1-211ENST00000472490 HNRNPA3P51991 378 aaKnown RBP8.78□□□□□ -1
BRCA1-211ENST00000472490 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
BRCA1-211ENST00000472490 KRTAP29-1A8MX34 341 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-211ENST00000472490 SRRM2Q9UQ35 2752 aaKnown RBP8.76□□□□□ -1.01
BRCA1-211ENST00000472490 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
BRCA1-211ENST00000472490 SMIM13P0DJ93 91 aa8.76□□□□□ -1.01
BRCA1-211ENST00000472490 TSPEAR-AS2P59090 65 aa8.76□□□□□ -1.01
BRCA1-211ENST00000472490 HIST3H2BBQ8N257 126 aa8.75□□□□□ -1.01
BRCA1-211ENST00000472490 IGLV7-43P04211 117 aa8.74□□□□□ -1.01
BRCA1-211ENST00000472490 SRSF9Q13242 221 aaKnown RBP eCLIP8.74□□□□□ -1.01
BRCA1-211ENST00000472490 REG3GQ6UW15 175 aa8.74□□□□□ -1.01
BRCA1-211ENST00000472490 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
BRCA1-211ENST00000472490 LINC00167Q96N53 147 aa8.74□□□□□ -1.01
BRCA1-211ENST00000472490 VPREB1P12018 145 aa8.73□□□□□ -1.01
BRCA1-211ENST00000472490 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
BRCA1-211ENST00000472490 KRTAP11-1Q8IUC1 163 aa8.72□□□□□ -1.01
BRCA1-211ENST00000472490 MIEN1Q9BRT3 115 aa8.72□□□□□ -1.01
BRCA1-211ENST00000472490 KRTAP4-8Q9BYQ9 185 aa8.72□□□□□ -1.01
BRCA1-211ENST00000472490 VPS13BQ7Z7G8 4022 aa8.71□□□□□ -1.01
BRCA1-211ENST00000472490 GAGE10A6NGK3 116 aa8.71□□□□□ -1.02
BRCA1-211ENST00000472490 RPL37AP8A6NKH3 93 aa8.71□□□□□ -1.02
BRCA1-211ENST00000472490 BOD1L2Q8IYS8 172 aa8.71□□□□□ -1.02
BRCA1-211ENST00000472490 DIRC1Q969H9 104 aa8.71□□□□□ -1.02
BRCA1-211ENST00000472490 SNRPEP62304 92 aaKnown RBP8.7□□□□□ -1.02
BRCA1-211ENST00000472490 IGKV2D-26A0A0A0MRZ7 120 aa8.69□□□□□ -1.02
BRCA1-211ENST00000472490 A0A0J9YXY3 114 aa8.69□□□□□ -1.02
BRCA1-211ENST00000472490 M0R378 163 aa8.69□□□□□ -1.02
BRCA1-211ENST00000472490 BCE1O60756 84 aa8.69□□□□□ -1.02
BRCA1-211ENST00000472490 IGLV1-50A0A075B6I6 118 aa8.68□□□□□ -1.02
BRCA1-211ENST00000472490 IGKV2-28A0A075B6P5 120 aa8.68□□□□□ -1.02
BRCA1-211ENST00000472490 LOC107984156A0A0G2JMH3 177 aa8.68□□□□□ -1.02
BRCA1-211ENST00000472490 ZNF815PA8K554 130 aa8.68□□□□□ -1.02
BRCA1-211ENST00000472490 IGKV2D-28P01615 120 aa8.68□□□□□ -1.02
BRCA1-211ENST00000472490 ARL17AQ8IVW1 177 aa8.68□□□□□ -1.02
BRCA1-211ENST00000472490 C5orf52A6NGY3 159 aa8.67□□□□□ -1.02
BRCA1-211ENST00000472490 ZNF861PO60384 105 aa8.67□□□□□ -1.02
BRCA1-211ENST00000472490 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
BRCA1-211ENST00000472490 ATOH7Q8N100 152 aa8.67□□□□□ -1.02
BRCA1-211ENST00000472490 DAND5Q8N907 189 aa8.67□□□□□ -1.02
BRCA1-211ENST00000472490 HSBP1L1C9JCN9 74 aa8.66□□□□□ -1.02
BRCA1-211ENST00000472490 H0Y9J4 135 aa8.66□□□□□ -1.02
BRCA1-211ENST00000472490 TIMM17BO60830 172 aa8.66□□□□□ -1.02
BRCA1-211ENST00000472490 S100A12P80511 92 aa8.66□□□□□ -1.02
BRCA1-211ENST00000472490 LINC01600Q96MT4 127 aa8.66□□□□□ -1.02
BRCA1-211ENST00000472490 SCGB1D4Q6XE38 83 aa8.65□□□□□ -1.02
BRCA1-211ENST00000472490 Q8NDZ9 215 aa8.65□□□□□ -1.02
BRCA1-211ENST00000472490 UBE2AP49459 152 aa8.64□□□□□ -1.03
BRCA1-211ENST00000472490 FLG2Q5D862 2391 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-211ENST00000472490 TRBV10-2A0A0K0K1G8 114 aa8.63□□□□□ -1.03
BRCA1-211ENST00000472490 NCR3O14931 201 aa8.63□□□□□ -1.03
BRCA1-211ENST00000472490 NDUFC2O95298 119 aa8.63□□□□□ -1.03
BRCA1-211ENST00000472490 TMEM126AQ9H061 195 aa8.63□□□□□ -1.03
BRCA1-211ENST00000472490 SPANXB1Q9NS25 103 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-211ENST00000472490 ANKRD39Q53RE8 183 aa8.62□□□□□ -1.03
BRCA1-211ENST00000472490 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
BRCA1-211ENST00000472490 COPS9Q8WXC6 57 aa8.62□□□□□ -1.03
BRCA1-211ENST00000472490 MYCBP2O75592 4640 aa8.61□□□□□ -1.03
BRCA1-211ENST00000472490 TMEM238C9JI98 176 aa8.61□□□□□ -1.03
BRCA1-211ENST00000472490 SCGB1D1O95968 90 aa8.61□□□□□ -1.03
BRCA1-211ENST00000472490 TTTY13Q9BZ97 58 aa8.61□□□□□ -1.03
BRCA1-211ENST00000472490 PRYO14603 147 aa8.6□□□□□ -1.03
BRCA1-211ENST00000472490 FAM19A1Q7Z5A9 133 aa8.6□□□□□ -1.03
BRCA1-211ENST00000472490 LITAFQ99732 161 aa8.6□□□□□ -1.03
BRCA1-211ENST00000472490 NPC2P61916 151 aa8.59□□□□□ -1.03
BRCA1-211ENST00000472490 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
BRCA1-211ENST00000472490 Q6ZVH6 145 aa8.59□□□□□ -1.03
BRCA1-211ENST00000472490 LINC00308Q8TCZ7 52 aa8.59□□□□□ -1.03
BRCA1-211ENST00000472490 KCNQ1DNQ9H478 68 aa8.59□□□□□ -1.03
BRCA1-211ENST00000472490 SPANXCQ9NY87 97 aa8.59□□□□□ -1.03
BRCA1-211ENST00000472490 CBY1Q9Y3M2 126 aa8.59□□□□□ -1.03
BRCA1-211ENST00000472490 TRBV10-3A0A0K0K1G6 114 aa8.58□□□□□ -1.04
BRCA1-211ENST00000472490 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
BRCA1-211ENST00000472490 DDTP30046 118 aa8.58□□□□□ -1.04
BRCA1-211ENST00000472490 SPANXDQ9BXN6 97 aa8.58□□□□□ -1.04
BRCA1-211ENST00000472490 SOSTDC1Q6X4U4 206 aa8.57□□□□□ -1.04
BRCA1-211ENST00000472490 KRTAP13-1Q8IUC0 172 aa8.57□□□□□ -1.04
BRCA1-211ENST00000472490 PCP2Q8IVA1 136 aa8.57□□□□□ -1.04
BRCA1-211ENST00000472490 IFITM1P13164 125 aa8.56□□□□□ -1.04
BRCA1-211ENST00000472490 LINC00337Q8N6G1 96 aa8.56□□□□□ -1.04
BRCA1-211ENST00000472490 ETDCA0A1B0GVM5 59 aa8.55□□□□□ -1.04
BRCA1-211ENST00000472490 SPRR1AP35321 89 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms