RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 LINC00158P58513 81 aa9.42□□□□□ -0.9
SNX13-205ENST00000471744 MEIG1Q5JSS6 88 aa9.42□□□□□ -0.9
SNX13-205ENST00000471744 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
SNX13-205ENST00000471744 TP73-AS1Q9UF72 201 aa9.42□□□□□ -0.9
SNX13-205ENST00000471744 VPS13BQ7Z7G8 4022 aa9.42□□□□□ -0.9
SNX13-205ENST00000471744 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
SNX13-205ENST00000471744 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
SNX13-205ENST00000471744 LBHQ53QV2 105 aaPredicted RBP9.41□□□□□ -0.9
SNX13-205ENST00000471744 KRTAP7-1Q8IUC3 87 aa9.41□□□□□ -0.9
SNX13-205ENST00000471744 SND1-IT1Q9HBX3 110 aa9.41□□□□□ -0.9
SNX13-205ENST00000471744 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
SNX13-205ENST00000471744 SNRPEP62304 92 aaKnown RBP9.4□□□□□ -0.9
SNX13-205ENST00000471744 SERTAD4-AS1Q5TG53 156 aa9.4□□□□□ -0.9
SNX13-205ENST00000471744 IGLV5-37A0A075B6J1 123 aa9.39□□□□□ -0.91
SNX13-205ENST00000471744 UBE2BP63146 152 aa9.39□□□□□ -0.91
SNX13-205ENST00000471744 C22orf24Q9Y442 160 aa9.39□□□□□ -0.91
SNX13-205ENST00000471744 C5orf52A6NGY3 159 aa9.38□□□□□ -0.91
SNX13-205ENST00000471744 SMIM13P0DJ93 91 aa9.38□□□□□ -0.91
SNX13-205ENST00000471744 RPL24P83731 157 aaKnown RBP9.38□□□□□ -0.91
SNX13-205ENST00000471744 NKAPP1Q8N9T2 125 aa9.38□□□□□ -0.91
SNX13-205ENST00000471744 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
SNX13-205ENST00000471744 PSORS1C2Q9UIG4 136 aa9.37□□□□□ -0.91
SNX13-205ENST00000471744 A0A0U1RRA0 63 aa9.36□□□□□ -0.91
SNX13-205ENST00000471744 MIR7-3HGQ8N6C7 128 aa9.35□□□□□ -0.91
SNX13-205ENST00000471744 VPREB1P12018 145 aa9.34□□□□□ -0.91
SNX13-205ENST00000471744 C1orf137Q5JT78 98 aa9.33□□□□□ -0.92
SNX13-205ENST00000471744 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
SNX13-205ENST00000471744 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
SNX13-205ENST00000471744 HNRNPA3P51991 378 aaKnown RBP9.32□□□□□ -0.92
SNX13-205ENST00000471744 ATOH7Q8N100 152 aa9.32□□□□□ -0.92
SNX13-205ENST00000471744 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
SNX13-205ENST00000471744 IGKV2D-26A0A0A0MRZ7 120 aa9.31□□□□□ -0.92
SNX13-205ENST00000471744 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
SNX13-205ENST00000471744 HSBP1L1C9JCN9 74 aa9.31□□□□□ -0.92
SNX13-205ENST00000471744 TIMM17BO60830 172 aa9.31□□□□□ -0.92
SNX13-205ENST00000471744 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
SNX13-205ENST00000471744 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
SNX13-205ENST00000471744 BOD1L2Q8IYS8 172 aa9.31□□□□□ -0.92
SNX13-205ENST00000471744 MIEN1Q9BRT3 115 aa9.31□□□□□ -0.92
SNX13-205ENST00000471744 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
SNX13-205ENST00000471744 IGLV7-43P04211 117 aa9.29□□□□□ -0.92
SNX13-205ENST00000471744 ANKRD39Q53RE8 183 aa9.29□□□□□ -0.92
SNX13-205ENST00000471744 GAGE10A6NGK3 116 aa9.28□□□□□ -0.92
SNX13-205ENST00000471744 M0R378 163 aa9.28□□□□□ -0.92
SNX13-205ENST00000471744 SCGB1D1O95968 90 aa9.28□□□□□ -0.92
SNX13-205ENST00000471744 OXTP01178 125 aa9.28□□□□□ -0.92
SNX13-205ENST00000471744 SRSF9Q13242 221 aaKnown RBP eCLIP9.28□□□□□ -0.92
SNX13-205ENST00000471744 DAND5Q8N907 189 aa9.28□□□□□ -0.92
SNX13-205ENST00000471744 RPL37AP8A6NKH3 93 aa9.27□□□□□ -0.93
SNX13-205ENST00000471744 IGLV1-50A0A075B6I6 118 aa9.26□□□□□ -0.93
SNX13-205ENST00000471744 KRTAP29-1A8MX34 341 aaPredicted RBP9.26□□□□□ -0.93
SNX13-205ENST00000471744 SCGB1D4Q6XE38 83 aa9.26□□□□□ -0.93
SNX13-205ENST00000471744 Q8NDZ9 215 aa9.26□□□□□ -0.93
SNX13-205ENST00000471744 TTTY13Q9BZ97 58 aa9.26□□□□□ -0.93
SNX13-205ENST00000471744 DMBT1Q9UGM3 2413 aaPredicted RBP9.26□□□□□ -0.93
SNX13-205ENST00000471744 TMEM238C9JI98 176 aa9.25□□□□□ -0.93
SNX13-205ENST00000471744 BCE1O60756 84 aa9.25□□□□□ -0.93
SNX13-205ENST00000471744 NDUFC2O95298 119 aa9.25□□□□□ -0.93
SNX13-205ENST00000471744 GHRHP01286 108 aa9.25□□□□□ -0.93
SNX13-205ENST00000471744 REG3GQ6UW15 175 aa9.25□□□□□ -0.93
SNX13-205ENST00000471744 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
SNX13-205ENST00000471744 IGKV2-28A0A075B6P5 120 aa9.24□□□□□ -0.93
SNX13-205ENST00000471744 TRBV10-2A0A0K0K1G8 114 aa9.24□□□□□ -0.93
SNX13-205ENST00000471744 IGKV2D-28P01615 120 aa9.24□□□□□ -0.93
SNX13-205ENST00000471744 ADAMTSL4-AS1Q5T5F5 129 aa9.24□□□□□ -0.93
SNX13-205ENST00000471744 COPS9Q8WXC6 57 aa9.24□□□□□ -0.93
SNX13-205ENST00000471744 LITAFQ99732 161 aa9.24□□□□□ -0.93
SNX13-205ENST00000471744 SPANXB1Q9NS25 103 aaPredicted RBP9.23□□□□□ -0.93
SNX13-205ENST00000471744 PKHD1L1Q86WI1 4243 aa9.23□□□□□ -0.93
SNX13-205ENST00000471744 NCR3O14931 201 aa9.22□□□□□ -0.93
SNX13-205ENST00000471744 ZNF861PO60384 105 aa9.22□□□□□ -0.93
SNX13-205ENST00000471744 RPL28P46779 137 aaKnown RBP9.22□□□□□ -0.93
SNX13-205ENST00000471744 S100A12P80511 92 aa9.22□□□□□ -0.93
SNX13-205ENST00000471744 Q6ZVH6 145 aa9.22□□□□□ -0.93
SNX13-205ENST00000471744 PCP2Q8IVA1 136 aa9.22□□□□□ -0.93
SNX13-205ENST00000471744 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
SNX13-205ENST00000471744 SPANXDQ9BXN6 97 aa9.21□□□□□ -0.94
SNX13-205ENST00000471744 SPANXCQ9NY87 97 aa9.21□□□□□ -0.94
SNX13-205ENST00000471744 TMA7Q9Y2S6 64 aaKnown RBP9.21□□□□□ -0.94
SNX13-205ENST00000471744 H0Y9J4 135 aa9.2□□□□□ -0.94
SNX13-205ENST00000471744 PRYO14603 147 aa9.2□□□□□ -0.94
SNX13-205ENST00000471744 NPC2P61916 151 aa9.2□□□□□ -0.94
SNX13-205ENST00000471744 SOSTDC1Q6X4U4 206 aa9.2□□□□□ -0.94
SNX13-205ENST00000471744 TMEM126AQ9H061 195 aa9.2□□□□□ -0.94
SNX13-205ENST00000471744 PPDPFQ9H3Y8 114 aa9.2□□□□□ -0.94
SNX13-205ENST00000471744 IFITM1P13164 125 aa9.19□□□□□ -0.94
SNX13-205ENST00000471744 UBE2AP49459 152 aa9.19□□□□□ -0.94
SNX13-205ENST00000471744 JOSD1Q15040 202 aaPredicted RBP9.19□□□□□ -0.94
SNX13-205ENST00000471744 MYCBP2O75592 4640 aa9.19□□□□□ -0.94
SNX13-205ENST00000471744 KCNQ1DNQ9H478 68 aa9.18□□□□□ -0.94
SNX13-205ENST00000471744 CBY1Q9Y3M2 126 aa9.18□□□□□ -0.94
SNX13-205ENST00000471744 HERC1Q15751 4861 aa9.17□□□□□ -0.94
SNX13-205ENST00000471744 TRBV10-3A0A0K0K1G6 114 aa9.17□□□□□ -0.94
SNX13-205ENST00000471744 DDTP30046 118 aa9.17□□□□□ -0.94
SNX13-205ENST00000471744 S100A7L2Q5SY68 101 aa9.17□□□□□ -0.94
SNX13-205ENST00000471744 LINC01600Q96MT4 127 aa9.17□□□□□ -0.94
SNX13-205ENST00000471744 EIF4EBP3O60516 100 aaPredicted RBP9.16□□□□□ -0.94
SNX13-205ENST00000471744 FAM19A1Q7Z5A9 133 aa9.16□□□□□ -0.94
SNX13-205ENST00000471744 LINC00518Q8N0U6 118 aa9.16□□□□□ -0.94
SNX13-205ENST00000471744 KRTAP13-1Q8IUC0 172 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms