RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 PRO1933Q9H354 126 aa6.22□□□□□ -1.41
SF3A1-207ENST00000471342 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
SF3A1-207ENST00000471342 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
SF3A1-207ENST00000471342 A0A0U1RRA0 63 aa6.21□□□□□ -1.42
SF3A1-207ENST00000471342 LOC107984640A0A0U1RRK4 108 aa6.21□□□□□ -1.42
SF3A1-207ENST00000471342 VPREB1P12018 145 aa6.21□□□□□ -1.42
SF3A1-207ENST00000471342 PFN2P35080 140 aa6.21□□□□□ -1.42
SF3A1-207ENST00000471342 SFTA2Q6UW10 78 aa6.21□□□□□ -1.42
SF3A1-207ENST00000471342 PPDPFQ9H3Y8 114 aa6.21□□□□□ -1.42
SF3A1-207ENST00000471342 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.42
SF3A1-207ENST00000471342 SPANXB1Q9NS25 103 aaPredicted RBP6.21□□□□□ -1.42
SF3A1-207ENST00000471342 HIGD1BQ9P298 99 aa6.21□□□□□ -1.42
SF3A1-207ENST00000471342 IGLV5-37A0A075B6J1 123 aa6.2□□□□□ -1.42
SF3A1-207ENST00000471342 IGKV2-28A0A075B6P5 120 aa6.2□□□□□ -1.42
SF3A1-207ENST00000471342 IGKV2D-28P01615 120 aa6.2□□□□□ -1.42
SF3A1-207ENST00000471342 PRR3P79522 188 aaKnown RBP6.2□□□□□ -1.42
SF3A1-207ENST00000471342 LINC00308Q8TCZ7 52 aa6.2□□□□□ -1.42
SF3A1-207ENST00000471342 PLAC8Q9NZF1 115 aa6.2□□□□□ -1.42
SF3A1-207ENST00000471342 PLA2G2DQ9UNK4 145 aa6.2□□□□□ -1.42
SF3A1-207ENST00000471342 A0A087WYN8 130 aa6.19□□□□□ -1.42
SF3A1-207ENST00000471342 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.19□□□□□ -1.42
SF3A1-207ENST00000471342 HSBP1L1C9JCN9 74 aa6.19□□□□□ -1.42
SF3A1-207ENST00000471342 KRTAP10-4P60372 401 aaPredicted RBP6.19□□□□□ -1.42
SF3A1-207ENST00000471342 HAMPP81172 84 aa6.19□□□□□ -1.42
SF3A1-207ENST00000471342 SLC25A34Q6PIV7 304 aa6.19□□□□□ -1.42
SF3A1-207ENST00000471342 CIRBP-AS1Q8TBR5 109 aa6.19□□□□□ -1.42
SF3A1-207ENST00000471342 MIEN1Q9BRT3 115 aa6.19□□□□□ -1.42
SF3A1-207ENST00000471342 GAGE2BQ13066 116 aa6.18□□□□□ -1.42
SF3A1-207ENST00000471342 GAGE2EQ4V326 116 aa6.18□□□□□ -1.42
SF3A1-207ENST00000471342 MUSTN1Q8IVN3 82 aa6.18□□□□□ -1.42
SF3A1-207ENST00000471342 GAGE2DQ9UEU5 116 aa6.18□□□□□ -1.42
SF3A1-207ENST00000471342 EREGO14944 169 aa6.17□□□□□ -1.42
SF3A1-207ENST00000471342 LINC00158P58513 81 aa6.17□□□□□ -1.42
SF3A1-207ENST00000471342 SCXQ7RTU7 201 aa6.17□□□□□ -1.42
SF3A1-207ENST00000471342 IGKV2-24A0A0C4DH68 120 aa6.16□□□□□ -1.42
SF3A1-207ENST00000471342 J3QL48 77 aa6.16□□□□□ -1.42
SF3A1-207ENST00000471342 UQCR10Q9UDW1 63 aa6.16□□□□□ -1.42
SF3A1-207ENST00000471342 NPC2P61916 151 aa6.15□□□□□ -1.42
SF3A1-207ENST00000471342 RPL18AQ02543 176 aaKnown RBP6.15□□□□□ -1.42
SF3A1-207ENST00000471342 MEIG1Q5JSS6 88 aa6.15□□□□□ -1.42
SF3A1-207ENST00000471342 FXYD2P54710 66 aa6.14□□□□□ -1.43
SF3A1-207ENST00000471342 S100A12P80511 92 aa6.14□□□□□ -1.43
SF3A1-207ENST00000471342 Q6ZVH6 145 aa6.14□□□□□ -1.43
SF3A1-207ENST00000471342 PHF5AQ7RTV0 110 aaKnown RBP6.14□□□□□ -1.43
SF3A1-207ENST00000471342 LINC00337Q8N6G1 96 aa6.14□□□□□ -1.43
SF3A1-207ENST00000471342 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
SF3A1-207ENST00000471342 LINC00587B1AMM8 73 aa6.13□□□□□ -1.43
SF3A1-207ENST00000471342 NDUFC2O95298 119 aa6.13□□□□□ -1.43
SF3A1-207ENST00000471342 IFITM1P13164 125 aa6.13□□□□□ -1.43
SF3A1-207ENST00000471342 SCGB1D4Q6XE38 83 aa6.13□□□□□ -1.43
SF3A1-207ENST00000471342 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
SF3A1-207ENST00000471342 A0A1B0GWB2 263 aa6.12□□□□□ -1.43
SF3A1-207ENST00000471342 A4D1N5 150 aa6.12□□□□□ -1.43
SF3A1-207ENST00000471342 TMEM238C9JI98 176 aa6.12□□□□□ -1.43
SF3A1-207ENST00000471342 KRTAP4-16G5E9R7 235 aaPredicted RBP6.12□□□□□ -1.43
SF3A1-207ENST00000471342 IGLV6-57P01721 117 aa6.12□□□□□ -1.43
SF3A1-207ENST00000471342 CFC1BP0CG36 223 aa6.12□□□□□ -1.43
SF3A1-207ENST00000471342 CFC1P0CG37 223 aa6.12□□□□□ -1.43
SF3A1-207ENST00000471342 SMCPP49901 116 aaPredicted RBP6.12□□□□□ -1.43
SF3A1-207ENST00000471342 CTAG1AP78358 180 aa6.12□□□□□ -1.43
SF3A1-207ENST00000471342 TAL2Q16559 108 aa6.12□□□□□ -1.43
SF3A1-207ENST00000471342 IGLV1-50A0A075B6I6 118 aa6.11□□□□□ -1.43
SF3A1-207ENST00000471342 CDK2AP2O75956 126 aa6.11□□□□□ -1.43
SF3A1-207ENST00000471342 BVES-AS1Q5T3Y7 98 aa6.11□□□□□ -1.43
SF3A1-207ENST00000471342 FAM19A5Q7Z5A7 132 aaPredicted RBP6.11□□□□□ -1.43
SF3A1-207ENST00000471342 CEND1Q8N111 149 aa6.11□□□□□ -1.43
SF3A1-207ENST00000471342 LINC00167Q96N53 147 aa6.11□□□□□ -1.43
SF3A1-207ENST00000471342 LINC00474Q9P2X8 69 aa6.11□□□□□ -1.43
SF3A1-207ENST00000471342 PCLOQ9Y6V0 5065 aa6.1□□□□□ -1.43
SF3A1-207ENST00000471342 TRBV10-2A0A0K0K1G8 114 aa6.1□□□□□ -1.43
SF3A1-207ENST00000471342 DDTP30046 118 aa6.1□□□□□ -1.43
SF3A1-207ENST00000471342 SPRR1AP35321 89 aa6.1□□□□□ -1.43
SF3A1-207ENST00000471342 HSD52Q0P140 79 aa6.1□□□□□ -1.43
SF3A1-207ENST00000471342 KRTAP4-5Q9BYR2 181 aa6.1□□□□□ -1.43
SF3A1-207ENST00000471342 FAT3Q8TDW7 4589 aa6.1□□□□□ -1.43
SF3A1-207ENST00000471342 KRTAP13-1Q8IUC0 172 aa6.09□□□□□ -1.43
SF3A1-207ENST00000471342 M0QXV9 152 aa6.08□□□□□ -1.44
SF3A1-207ENST00000471342 M0R378 163 aa6.08□□□□□ -1.44
SF3A1-207ENST00000471342 NCR3O14931 201 aa6.08□□□□□ -1.44
SF3A1-207ENST00000471342 HNRNPA3P51991 378 aaKnown RBP6.08□□□□□ -1.44
SF3A1-207ENST00000471342 MRPL55Q7Z7F7 128 aaKnown RBP6.08□□□□□ -1.44
SF3A1-207ENST00000471342 HIST1H4GQ99525 98 aa6.08□□□□□ -1.44
SF3A1-207ENST00000471342 KCNQ1DNQ9H478 68 aa6.08□□□□□ -1.44
SF3A1-207ENST00000471342 LRP1Q07954 4544 aaKnown RBP6.08□□□□□ -1.44
SF3A1-207ENST00000471342 TRBV10-3A0A0K0K1G6 114 aa6.07□□□□□ -1.44
SF3A1-207ENST00000471342 SRSF9Q13242 221 aaKnown RBP eCLIP6.07□□□□□ -1.44
SF3A1-207ENST00000471342 GAGE10A6NGK3 116 aa6.06□□□□□ -1.44
SF3A1-207ENST00000471342 RPL37AP8A6NKH3 93 aa6.06□□□□□ -1.44
SF3A1-207ENST00000471342 LCE2AQ5TA79 106 aaPredicted RBP6.06□□□□□ -1.44
SF3A1-207ENST00000471342 A0A0B4J2C4 111 aa6.05□□□□□ -1.44
SF3A1-207ENST00000471342 TSTD3H0UI37 97 aa6.05□□□□□ -1.44
SF3A1-207ENST00000471342 K7ERJ3 54 aa6.05□□□□□ -1.44
SF3A1-207ENST00000471342 SMR3BP02814 79 aaPredicted RBP6.05□□□□□ -1.44
SF3A1-207ENST00000471342 SNHG12Q9BXW3 62 aa6.05□□□□□ -1.44
SF3A1-207ENST00000471342 PSORS1C2Q9UIG4 136 aa6.05□□□□□ -1.44
SF3A1-207ENST00000471342 PKIGQ9Y2B9 76 aa6.05□□□□□ -1.44
SF3A1-207ENST00000471342 TNXBP22105 4242 aa6.05□□□□□ -1.44
SF3A1-207ENST00000471342 HINT1P49773 126 aaPredicted RBP6.04□□□□□ -1.44
SF3A1-207ENST00000471342 RPL24P83731 157 aaKnown RBP6.04□□□□□ -1.44
SF3A1-207ENST00000471342 MYCBP2O75592 4640 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms